Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:11 (34456): wrapper (7.7.26015): starting
13:46:11 (34456): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 13:46:11] Arguments: --nthreads 8
[2025-11-25 13:46:11] Threads: 8
[2025-11-25 13:46:11] Checking for CVMFS
[2025-11-25 13:46:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:46:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:46:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:46:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:46:12] 2.13.3.0 12388 28941 218184 153293 3 145 28529392 32935936 34850 16776704 0 114879495 99.489 138089834 36484 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:46:12] CVMFS is ok
[2025-11-25 13:46:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:46:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:46:12] Further information can be found at the LHC@home message board.
[2025-11-25 13:46:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:46:12] Checking for apptainer binary...
[2025-11-25 13:46:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:46:12] Running /usr/bin/apptainer --version
[2025-11-25 13:46:12] apptainer version 1.4.4-1.el9
[2025-11-25 13:46:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:46:12] c7-4-31.aglt2.org
[2025-11-25 13:46:12] apptainer works
[2025-11-25 13:46:12] Set ATHENA_PROC_NUMBER=8
[2025-11-25 13:46:12] Set ATHENA_CORE_NUMBER=8
[2025-11-25 13:46:12] Starting ATLAS job with PandaID=6894238171
[2025-11-25 13:46:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:53:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:53:07] 2025-11-26 17:52:22,054 | INFO     | time since job start (83155s) is within the limit (172800.0s)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,165 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:53:07] 2025-11-26 17:52:22,174 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3116.144135416669
[2025-11-26 12:53:07] 2025-11-26 17:52:22,189 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894238171/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,190 | INFO     | extracted standard info from prmon json
[2025-11-26 12:53:07] 2025-11-26 17:52:22,190 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:53:07] 2025-11-26 17:52:22,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:53:07] 2025-11-26 17:52:22,208 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:53:07] 2025-11-26 17:52:22,209 | INFO     | sum of square deviations: 785174151524.4305
[2025-11-26 12:53:07] 2025-11-26 17:52:22,249 | INFO     | sum of deviations: 3832665165619.4443
[2025-11-26 12:53:07] 2025-11-26 17:52:22,249 | INFO     | mean x: 1764137961.1342626
[2025-11-26 12:53:07] 2025-11-26 17:52:22,250 | INFO     | mean y: 2980649.0741012474
[2025-11-26 12:53:07] 2025-11-26 17:52:22,250 | INFO     | intersect: -8608293802.40766
[2025-11-26 12:53:07] 2025-11-26 17:52:22,251 | INFO     | chi2: 5.278850166975367
[2025-11-26 12:53:07] 2025-11-26 17:52:22,252 | INFO     | sum of square deviations: 776565336045.473
[2025-11-26 12:53:07] 2025-11-26 17:52:22,287 | INFO     | sum of deviations: 4284283638813.3496
[2025-11-26 12:53:07] 2025-11-26 17:52:22,287 | INFO     | mean x: 1764137808.638439
[2025-11-26 12:53:07] 2025-11-26 17:52:22,288 | INFO     | mean y: 2988645.843888071
[2025-11-26 12:53:07] 2025-11-26 17:52:22,288 | INFO     | intersect: -9729697580.726397
[2025-11-26 12:53:07] 2025-11-26 17:52:22,289 | INFO     | chi2: 2.3153511715787065
[2025-11-26 12:53:07] 2025-11-26 17:52:22,289 | INFO     | current chi2=2.3153511715787065 (change=56.13910040365215 %)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,290 | INFO     | sum of square deviations: 768019519234.0367
[2025-11-26 12:53:07] 2025-11-26 17:52:22,324 | INFO     | sum of deviations: 4372103986536.4023
[2025-11-26 12:53:07] 2025-11-26 17:52:22,324 | INFO     | mean x: 1764137656.1411679
[2025-11-26 12:53:07] 2025-11-26 17:52:22,324 | INFO     | mean y: 2990208.861788618
[2025-11-26 12:53:07] 2025-11-26 17:52:22,324 | INFO     | intersect: -10039714548.051329
[2025-11-26 12:53:07] 2025-11-26 17:52:22,325 | INFO     | chi2: 1.9638610726379688
[2025-11-26 12:53:07] 2025-11-26 17:52:22,326 | INFO     | current chi2=1.9638610726379688 (change=15.180854777250769 %)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,326 | INFO     | right removable region: 1352
[2025-11-26 12:53:07] 2025-11-26 17:52:22,327 | INFO     | sum of square deviations: 776564392985.4731
[2025-11-26 12:53:07] 2025-11-26 17:52:22,363 | INFO     | sum of deviations: 3505077016555.908
[2025-11-26 12:53:07] 2025-11-26 17:52:22,363 | INFO     | mean x: 1764138113.638439
[2025-11-26 12:53:07] 2025-11-26 17:52:22,363 | INFO     | mean y: 2986444.710603829
[2025-11-26 12:53:07] 2025-11-26 17:52:22,363 | INFO     | intersect: -7959572760.936698
[2025-11-26 12:53:07] 2025-11-26 17:52:22,364 | INFO     | chi2: 3.5099163920713807
[2025-11-26 12:53:07] 2025-11-26 17:52:22,365 | INFO     | current chi2=3.5099163920713807 (change=33.50983109864502 %)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,366 | INFO     | sum of square deviations: 768018046939.3185
[2025-11-26 12:53:07] 2025-11-26 17:52:22,400 | INFO     | sum of deviations: 3431447165962.3374
[2025-11-26 12:53:07] 2025-11-26 17:52:22,401 | INFO     | mean x: 1764138266.1404288
[2025-11-26 12:53:07] 2025-11-26 17:52:22,401 | INFO     | mean y: 2987758.187730968
[2025-11-26 12:53:07] 2025-11-26 17:52:22,401 | INFO     | intersect: -7879050011.416373
[2025-11-26 12:53:07] 2025-11-26 17:52:22,402 | INFO     | chi2: 3.492984648188815
[2025-11-26 12:53:07] 2025-11-26 17:52:22,402 | INFO     | current chi2=3.492984648188815 (change=0.4823973562678942 %)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,402 | INFO     | left removable region: 20
[2025-11-26 12:53:07] 2025-11-26 17:52:22,403 | INFO     | sum of square deviations: 732808927317.4535
[2025-11-26 12:53:07] 2025-11-26 17:52:22,437 | INFO     | sum of deviations: 3862912243115.586
[2025-11-26 12:53:07] 2025-11-26 17:52:22,437 | INFO     | mean x: 1764138235.653904
[2025-11-26 12:53:07] 2025-11-26 17:52:22,437 | INFO     | mean y: 2999162.4264264265
[2025-11-26 12:53:07] 2025-11-26 17:52:22,438 | INFO     | intersect: -9296438842.51433
[2025-11-26 12:53:07] 2025-11-26 17:52:22,439 | INFO     | chi2: 0.16130115064890144
[2025-11-26 12:53:07] 2025-11-26 17:52:22,439 | INFO     | current memory leak: 5.27 B/s (using 1332 data points, chi2=0.16)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,440 | INFO     | could have reported an average CPU frequency of 3117 MHz (49 samples)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,440 | INFO     | ..............................
[2025-11-26 12:53:07] 2025-11-26 17:52:22,440 | INFO     | . Timing measurements:
[2025-11-26 12:53:07] 2025-11-26 17:52:22,440 | INFO     | . get job = 0 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . initial setup = 2 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . payload setup = 8 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . stage-in = 0 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . payload execution = 83112 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . stage-out = 3 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | . log creation = 0 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,441 | INFO     | ..............................
[2025-11-26 12:53:07] 2025-11-26 17:52:22,721 | INFO     | 
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | job summary report
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | --------------------------------------------------
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | PanDA job id: 6894238171
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | task id: 47533962
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | errors: (none)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | pilot state: finished 
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | transexitcode: 0
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | exeerrorcode: 0
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | exeerrordiag: 
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | exitcode: 0
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | exitmsg: OK
[2025-11-26 12:53:07] 2025-11-26 17:52:22,722 | INFO     | cpuconsumptiontime: 211713 s
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | nevents: 1000
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | neventsw: 0
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | pid: 45653
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | pgrp: 45653
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | corecount: 8
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | event service: False
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | sizes: {0: 2284304, 6: 2284566, 11: 2284594, 83125: 2347822, 83129: 2356816, 83130: 2356872, 83138: 2357246}
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | --------------------------------------------------
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | 
[2025-11-26 12:53:07] 2025-11-26 17:52:22,723 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 12:53:07] 2025-11-26 17:52:22,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,743 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,744 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:53:07] 2025-11-26 17:52:22,745 | INFO     | job 6894238171 has completed (purged errors)
[2025-11-26 12:53:07] 2025-11-26 17:52:22,745 | INFO     | overall cleanup function is called
[2025-11-26 12:53:07] 2025-11-26 17:52:23,761 | INFO     | --- collectZombieJob: --- 10, [45653]
[2025-11-26 12:53:07] 2025-11-26 17:52:23,762 | INFO     | zombie collector waiting for pid 45653
[2025-11-26 12:53:07] 2025-11-26 17:52:23,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:53:07] 2025-11-26 17:52:23,762 | INFO     | collected zombie processes
[2025-11-26 12:53:07] 2025-11-26 17:52:23,762 | INFO     | will attempt to kill all subprocesses of pid=45653
[2025-11-26 12:53:07] 2025-11-26 17:52:24,353 | INFO     | process IDs to be killed: [45653] (in reverse order)
[2025-11-26 12:53:07] 2025-11-26 17:52:24,590 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:53:07] 2025-11-26 17:52:24,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:53:07] 2025-11-26 17:52:24,618 | INFO     | did not find any defunct processes belonging to 45653
[2025-11-26 12:53:07] 2025-11-26 17:52:24,644 | INFO     | did not find any defunct processes belonging to 45653
[2025-11-26 12:53:07] 2025-11-26 17:52:24,646 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:53:07] 2025-11-26 17:52:24,646 | INFO     | ready for new job
[2025-11-26 12:53:07] 2025-11-26 17:52:24,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:53:07] 2025-11-26 17:52:24,652 | INFO     | ***************************************
[2025-11-26 12:53:07] 2025-11-26 17:52:24,652 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:53:07] 2025-11-26 17:52:24,652 | INFO     | ***************************************
[2025-11-26 12:53:07] 2025-11-26 17:52:24,652 | INFO     | 
[2025-11-26 12:53:07] 2025-11-26 17:52:24,658 | INFO     | architecture information:
[2025-11-26 12:53:07] 2025-11-26 17:52:24,659 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:53:07] 2025-11-26 17:52:24,675 | INFO     | cat /etc/os-release:
[2025-11-26 12:53:07] NAME="CentOS Linux"
[2025-11-26 12:53:07] VERSION="7 (Core)"
[2025-11-26 12:53:07] ID="centos"
[2025-11-26 12:53:07] ID_LIKE="rhel fedora"
[2025-11-26 12:53:07] VERSION_ID="7"
[2025-11-26 12:53:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:53:07] ANSI_COLOR="0;31"
[2025-11-26 12:53:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:53:07] HOME_URL="https://www.centos.org/"
[2025-11-26 12:53:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:53:07] 
[2025-11-26 12:53:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:53:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:53:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:53:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:53:07] 
[2025-11-26 12:53:07] 2025-11-26 17:52:24,675 | INFO     | ***************************************
[2025-11-26 12:53:07] 2025-11-26 17:52:25,178 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 12:53:07] 2025-11-26 17:52:25,198 | INFO     | sufficient remaining disk space (67783098368 B)
[2025-11-26 12:53:07] 2025-11-26 17:52:25,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:53:07] 2025-11-26 17:52:25,199 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:53:07] 2025-11-26 17:52:25,199 | INFO     | update_server=False
[2025-11-26 12:53:07] 2025-11-26 17:52:25,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:53:07] 2025-11-26 17:52:25,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:53:07] 2025-11-26 17:52:25,214 | INFO     | all payload control threads have been joined
[2025-11-26 12:53:07] 2025-11-26 17:52:25,409 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 12:53:07] 2025-11-26 17:52:25,410 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 12:53:07] 2025-11-26 17:52:25,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:53:07] 2025-11-26 17:52:25,410 | INFO     | will abort loop
[2025-11-26 12:53:07] 2025-11-26 17:52:25,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:53:07] 2025-11-26 17:52:26,108 | INFO     | all data control threads have been joined
[2025-11-26 12:53:07] 2025-11-26 17:52:26,212 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,213 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,225 | INFO     | [payload] control thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,323 | INFO     | all job control threads have been joined
[2025-11-26 12:53:07] 2025-11-26 17:52:26,414 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,570 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,659 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:26,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,112 | INFO     | [data] control thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,330 | INFO     | [job] control thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,383 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:53:07] 2025-11-26 17:52:27,553 | INFO     | [job] validate thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:27,774 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:28,534 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:29,214 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:53:07] 2025-11-26 17:52:55,859 | INFO     | PID=38303 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 12:53:07] 2025-11-26 17:52:55,859 | INFO     | .. there are 43 such processes running
[2025-11-26 12:53:07] 2025-11-26 17:52:55,860 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:53:07] 2025-11-26 17:52:55,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:53:07] 2025-11-26 17:52:55,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:53:07] 2025-11-26 17:53:00,219 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:53:07] 2025-11-26 17:53:01,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008098719552)>', '<ExcThread(monitor, started 140007478130432)>']
[2025-11-26 12:53:07] 2025-11-26 17:53:01,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:53:07] 2025-11-26 17:53:01,936 | INFO     | [monitor] control thread has ended
[2025-11-26 12:53:07] 2025-11-26 17:53:06,490 | INFO     | all workflow threads have been joined
[2025-11-26 12:53:07] 2025-11-26 17:53:06,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:53:07] 2025-11-26 17:53:06,491 | INFO     | traces error code: 0
[2025-11-26 12:53:07] 2025-11-26 17:53:06,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:53:07] 2025-11-26 17:53:06,667 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:53:07] 2025-11-26 17:53:06,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:53:07] 2025-11-26 17:53:06,673 [wrapper] pilotpid: 38303
[2025-11-26 12:53:07] 2025-11-26 17:53:06,676 [wrapper] Pilot exit status: 0
[2025-11-26 12:53:07] 2025-11-26 17:53:06,696 [wrapper] pandaids: 6894238171
[2025-11-26 12:53:07] 2025-11-26 17:53:06,812 [wrapper] cleanup supervisor_pilot 2249353 38304
[2025-11-26 12:53:07] 2025-11-26 17:53:06,816 [wrapper] Test setup, not cleaning
[2025-11-26 12:53:07] 2025-11-26 17:53:06,836 [wrapper] apfmon messages muted
[2025-11-26 12:53:07] 2025-11-26 17:53:06,846 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:53:07] 2025-11-26 17:53:06,854 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:53:07]  *** Error codes and diagnostics ***
[2025-11-26 12:53:07]     "exeErrorCode": 0,
[2025-11-26 12:53:07]     "exeErrorDiag": "",
[2025-11-26 12:53:07]     "pilotErrorCode": 0,
[2025-11-26 12:53:07]     "pilotErrorDiag": "",
[2025-11-26 12:53:07]  *** Listing of results directory ***
[2025-11-26 12:53:07] total 1332292
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 02:32 pilot3.tar.gz
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 02:39 queuedata.json
[2025-11-26 12:53:07] -rwx------. 1 boincer umatlas     36292 Nov 24 02:40 runpilot2-wrapper.sh
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas       100 Nov 25 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:53:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 13:46 run_atlas
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas       105 Nov 25 13:46 job.xml
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas 409678151 Nov 25 13:46 EVNT.47493127._001004.pool.root.1
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:46 start_atlas.sh
[2025-11-26 12:53:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 13:46 shared
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 13:46 input.tar.gz
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas         0 Nov 25 13:46 boinc_lockfile
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas      2780 Nov 25 13:46 pandaJob.out
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas        57 Nov 25 13:46 setup.sh.local
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas    991543 Nov 25 13:46 agis_schedconf.cvmfs.json
[2025-11-26 12:53:07] drwx------. 5 boincer umatlas      4096 Nov 25 13:46 pilot3
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas       533 Nov 26 12:43 boinc_task_state.xml
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 12:45 init_data.xml
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas 926459335 Nov 26 12:51 HITS.47533962._000031.pool.root.1
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas      1069 Nov 26 12:52 memory_monitor_summary.json
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas   2333490 Nov 26 12:52 log.47533962._000031.job.log.tgz.1
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas      8619 Nov 26 12:52 heartbeat.json
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas        95 Nov 26 12:52 pilot_heartbeat.json
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:53 wrapper_checkpoint.txt
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas      5008 Nov 26 12:53 pilotlog.txt
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:53 boinc_mmap_file
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas   9768564 Nov 26 12:53 log.47533962._000031.job.log.1
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas       353 Nov 26 12:53 output.list
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:53 runtime_log
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas  12124160 Nov 26 12:53 result.tar.gz
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 12:53 runtime_log.err
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas       664 Nov 26 12:53 AFrNDmGMgh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYWLKDm76K8bn.diag
[2025-11-26 12:53:07] -rw-r--r--. 1 boincer umatlas     21274 Nov 26 12:53 stderr.txt
[2025-11-26 12:53:07] HITS file was successfully produced:
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas 926459335 Nov 26 12:51 shared/HITS.pool.root.1
[2025-11-26 12:53:07]  *** Contents of shared directory: ***
[2025-11-26 12:53:07] total 1317272
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas 409678151 Nov 25 13:46 ATLAS.root_0
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:46 start_atlas.sh
[2025-11-26 12:53:07] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 13:46 input.tar.gz
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas 926459335 Nov 26 12:51 HITS.pool.root.1
[2025-11-26 12:53:07] -rw-------. 1 boincer umatlas  12124160 Nov 26 12:53 result.tar.gz
12:53:08 (34456): run_atlas exited; CPU time 213176.107344
12:53:08 (34456): called boinc_finish(0)

</stderr_txt>
]]>

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