Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:09:35 (3953469): wrapper (7.7.26015): starting
16:09:35 (3953469): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 16:09:35] Arguments: --nthreads 9
[2025-11-25 16:09:35] Threads: 9
[2025-11-25 16:09:35] Checking for CVMFS
[2025-11-25 16:09:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:09:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:09:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:09:36] 2.13.3.0 9955 29086 291360 153297 2 183 27607678 32935937 26487 16776704 0 168345402 99.790 91880232 33018 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:09:36] CVMFS is ok
[2025-11-25 16:09:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:09:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:09:36] Further information can be found at the LHC@home message board.
[2025-11-25 16:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:09:36] Checking for apptainer binary...
[2025-11-25 16:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:09:36] Running /usr/bin/apptainer --version
[2025-11-25 16:09:36] apptainer version 1.4.4-1.el9
[2025-11-25 16:09:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:09:36] c-5-1.aglt2.org
[2025-11-25 16:09:36] apptainer works
[2025-11-25 16:09:36] Set ATHENA_PROC_NUMBER=9
[2025-11-25 16:09:36] Set ATHENA_CORE_NUMBER=9
[2025-11-25 16:09:36] Starting ATLAS job with PandaID=6896219206
[2025-11-25 16:09:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:39:00]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:39:00] 2025-11-26 15:38:26,346 | INFO     | time since job start (66511s) is within the limit (172800.0s)
[2025-11-26 10:39:00] 2025-11-26 15:38:26,941 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 10:39:00] 2025-11-26 15:38:26,952 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.039125
[2025-11-26 10:39:00] 2025-11-26 15:38:26,959 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896219206/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:39:00] 2025-11-26 15:38:26,959 | INFO     | extracted standard info from prmon json
[2025-11-26 10:39:00] 2025-11-26 15:38:26,960 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:39:00] 2025-11-26 15:38:26,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:39:00] 2025-11-26 15:38:26,982 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:39:00] 2025-11-26 15:38:26,983 | INFO     | sum of square deviations: 401584414823.61066
[2025-11-26 10:39:00] 2025-11-26 15:38:27,025 | INFO     | sum of deviations: 1888235429128.4326
[2025-11-26 10:39:00] 2025-11-26 15:38:27,025 | INFO     | mean x: 1764138249.1669724
[2025-11-26 10:39:00] 2025-11-26 15:38:27,025 | INFO     | mean y: 3140601.695412844
[2025-11-26 10:39:00] 2025-11-26 15:38:27,026 | INFO     | intersect: -8291773794.872528
[2025-11-26 10:39:00] 2025-11-26 15:38:27,027 | INFO     | chi2: 12.778848074803093
[2025-11-26 10:39:00] 2025-11-26 15:38:27,033 | INFO     | sum of square deviations: 396084130972.1531
[2025-11-26 10:39:00] 2025-11-26 15:38:27,103 | INFO     | sum of deviations: 2282853696051.7764
[2025-11-26 10:39:00] 2025-11-26 15:38:27,104 | INFO     | mean x: 1764138096.6746545
[2025-11-26 10:39:00] 2025-11-26 15:38:27,104 | INFO     | mean y: 3151540.141013825
[2025-11-26 10:39:00] 2025-11-26 15:38:27,104 | INFO     | intersect: -10164559962.09693
[2025-11-26 10:39:00] 2025-11-26 15:38:27,106 | INFO     | chi2: 9.5629427801309
[2025-11-26 10:39:00] 2025-11-26 15:38:27,106 | INFO     | current chi2=9.5629427801309 (change=25.165846528946602 %)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,113 | INFO     | sum of square deviations: 390634313183.06885
[2025-11-26 10:39:00] 2025-11-26 15:38:27,178 | INFO     | sum of deviations: 2738230399683.2734
[2025-11-26 10:39:00] 2025-11-26 15:38:27,183 | INFO     | mean x: 1764137944.1824074
[2025-11-26 10:39:00] 2025-11-26 15:38:27,183 | INFO     | mean y: 3164283.0037037036
[2025-11-26 10:39:00] 2025-11-26 15:38:27,183 | INFO     | intersect: -12362918226.83249
[2025-11-26 10:39:00] 2025-11-26 15:38:27,185 | INFO     | chi2: 5.498558730872911
[2025-11-26 10:39:00] 2025-11-26 15:38:27,185 | INFO     | current chi2=5.498558730872911 (change=42.501394630349914 %)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,186 | INFO     | sum of square deviations: 385234728893.84735
[2025-11-26 10:39:00] 2025-11-26 15:38:27,249 | INFO     | sum of deviations: 2969331442986.985
[2025-11-26 10:39:00] 2025-11-26 15:38:27,249 | INFO     | mean x: 1764137791.6902325
[2025-11-26 10:39:00] 2025-11-26 15:38:27,249 | INFO     | mean y: 3170809.684651163
[2025-11-26 10:39:00] 2025-11-26 15:38:27,251 | INFO     | intersect: -13594538383.535215
[2025-11-26 10:39:00] 2025-11-26 15:38:27,252 | INFO     | chi2: 4.291140691540429
[2025-11-26 10:39:00] 2025-11-26 15:38:27,252 | INFO     | current chi2=4.291140691540429 (change=21.958809543183712 %)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,253 | INFO     | right removable region: 1074
[2025-11-26 10:39:00] 2025-11-26 15:38:27,254 | INFO     | sum of square deviations: 396083022602.15283
[2025-11-26 10:39:00] 2025-11-26 15:38:27,317 | INFO     | sum of deviations: 1559243648069.0847
[2025-11-26 10:39:00] 2025-11-26 15:38:27,317 | INFO     | mean x: 1764138401.6746545
[2025-11-26 10:39:00] 2025-11-26 15:38:27,317 | INFO     | mean y: 3149712.7594470046
[2025-11-26 10:39:00] 2025-11-26 15:38:27,317 | INFO     | intersect: -6941660946.012277
[2025-11-26 10:39:00] 2025-11-26 15:38:27,323 | INFO     | chi2: 10.633849824689936
[2025-11-26 10:39:00] 2025-11-26 15:38:27,323 | INFO     | current chi2=10.633849824689936 (change=16.785536830526954 %)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,324 | INFO     | left removable region: 10
[2025-11-26 10:39:00] 2025-11-26 15:38:27,327 | INFO     | sum of square deviations: 373529624252.35986
[2025-11-26 10:39:00] 2025-11-26 15:38:27,337 | INFO     | monitor loop #4025: job 0:6896219206 is in state 'finished'
[2025-11-26 10:39:00] 2025-11-26 15:38:27,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,368 | INFO     | sum of deviations: 2577313843004.5615
[2025-11-26 10:39:00] 2025-11-26 15:38:27,369 | INFO     | mean x: 1764138066.200188
[2025-11-26 10:39:00] 2025-11-26 15:38:27,369 | INFO     | mean y: 3184657.189849624
[2025-11-26 10:39:00] 2025-11-26 15:38:27,369 | INFO     | intersect: -12169176418.828117
[2025-11-26 10:39:00] 2025-11-26 15:38:27,375 | INFO     | chi2: 1.7565574828687502
[2025-11-26 10:39:00] 2025-11-26 15:38:27,375 | INFO     | current memory leak: 6.90 B/s (using 1064 data points, chi2=1.76)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,376 | INFO     | could have reported an average CPU frequency of 2600 MHz (40 samples)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,376 | INFO     | ..............................
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . Timing measurements:
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . get job = 0 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . initial setup = 3 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . payload setup = 11 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . stage-in = 0 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . payload execution = 66457 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . stage-out = 5 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | . log creation = 1 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,377 | INFO     | ..............................
[2025-11-26 10:39:00] 2025-11-26 15:38:27,544 | INFO     | 
[2025-11-26 10:39:00] 2025-11-26 15:38:27,544 | INFO     | job summary report
[2025-11-26 10:39:00] 2025-11-26 15:38:27,544 | INFO     | --------------------------------------------------
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | PanDA job id: 6896219206
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | task id: 47556149
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | errors: (none)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | pilot state: finished 
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | transexitcode: 0
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | exeerrorcode: 0
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | exeerrordiag: 
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | exitcode: 0
[2025-11-26 10:39:00] 2025-11-26 15:38:27,545 | INFO     | exitmsg: OK
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | cpuconsumptiontime: 303089 s
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | nevents: 1000
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | neventsw: 0
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | pid: 3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | pgrp: 3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | corecount: 9
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | event service: False
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | sizes: {0: 2284309, 9: 2284571, 11: 2284599, 66472: 2340455, 66478: 2349505, 66492: 2349695}
[2025-11-26 10:39:00] 2025-11-26 15:38:27,546 | INFO     | --------------------------------------------------
[2025-11-26 10:39:00] 2025-11-26 15:38:27,547 | INFO     | 
[2025-11-26 10:39:00] 2025-11-26 15:38:27,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 10:39:00] 2025-11-26 15:38:27,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:39:00] 2025-11-26 15:38:27,573 | INFO     | job 6896219206 has completed (purged errors)
[2025-11-26 10:39:00] 2025-11-26 15:38:27,573 | INFO     | overall cleanup function is called
[2025-11-26 10:39:00] 2025-11-26 15:38:28,590 | INFO     | --- collectZombieJob: --- 10, [3966430]
[2025-11-26 10:39:00] 2025-11-26 15:38:28,590 | INFO     | zombie collector waiting for pid 3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:28,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:39:00] 2025-11-26 15:38:28,591 | INFO     | collected zombie processes
[2025-11-26 10:39:00] 2025-11-26 15:38:28,591 | INFO     | will attempt to kill all subprocesses of pid=3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:29,200 | INFO     | process IDs to be killed: [3966430] (in reverse order)
[2025-11-26 10:39:00] 2025-11-26 15:38:29,460 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:39:00] 2025-11-26 15:38:29,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:39:00] 2025-11-26 15:38:29,486 | INFO     | did not find any defunct processes belonging to 3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:29,512 | INFO     | did not find any defunct processes belonging to 3966430
[2025-11-26 10:39:00] 2025-11-26 15:38:29,513 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:39:00] 2025-11-26 15:38:29,513 | INFO     | ready for new job
[2025-11-26 10:39:00] 2025-11-26 15:38:29,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:39:00] 2025-11-26 15:38:29,524 | INFO     | ***************************************
[2025-11-26 10:39:00] 2025-11-26 15:38:29,524 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:39:00] 2025-11-26 15:38:29,524 | INFO     | ***************************************
[2025-11-26 10:39:00] 2025-11-26 15:38:29,524 | INFO     | 
[2025-11-26 10:39:00] 2025-11-26 15:38:29,527 | INFO     | architecture information:
[2025-11-26 10:39:00] 2025-11-26 15:38:29,529 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:39:00] 2025-11-26 15:38:29,562 | INFO     | cat /etc/os-release:
[2025-11-26 10:39:00] NAME="CentOS Linux"
[2025-11-26 10:39:00] VERSION="7 (Core)"
[2025-11-26 10:39:00] ID="centos"
[2025-11-26 10:39:00] ID_LIKE="rhel fedora"
[2025-11-26 10:39:00] VERSION_ID="7"
[2025-11-26 10:39:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:39:00] ANSI_COLOR="0;31"
[2025-11-26 10:39:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:39:00] HOME_URL="https://www.centos.org/"
[2025-11-26 10:39:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:39:00] 
[2025-11-26 10:39:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:39:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:39:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:39:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:39:00] 
[2025-11-26 10:39:00] 2025-11-26 15:38:29,562 | INFO     | ***************************************
[2025-11-26 10:39:00] 2025-11-26 15:38:30,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 10:39:00] 2025-11-26 15:38:30,148 | INFO     | sufficient remaining disk space (71351402496 B)
[2025-11-26 10:39:00] 2025-11-26 15:38:30,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:39:00] 2025-11-26 15:38:30,149 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:39:00] 2025-11-26 15:38:30,149 | INFO     | update_server=False
[2025-11-26 10:39:00] 2025-11-26 15:38:30,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:39:00] 2025-11-26 15:38:30,288 | INFO     | all job control threads have been joined
[2025-11-26 10:39:00] 2025-11-26 15:38:30,624 | INFO     | all payload control threads have been joined
[2025-11-26 10:39:00] 2025-11-26 15:38:30,854 | INFO     | all data control threads have been joined
[2025-11-26 10:39:00] 2025-11-26 15:38:30,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:39:00] 2025-11-26 15:38:30,868 | INFO     | aborting loop
[2025-11-26 10:39:00] 2025-11-26 15:38:31,157 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,191 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,293 | INFO     | [job] control thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,330 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:39:00] 2025-11-26 15:38:31,641 | INFO     | [payload] control thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,861 | INFO     | [data] control thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:31,876 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,145 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,259 | INFO     | [job] validate thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,330 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,476 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:39:00] 2025-11-26 15:38:32,572 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:32,587 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:33,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:39:00] 2025-11-26 15:38:33,505 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:33,568 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:37,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:39:00] 2025-11-26 15:38:53,928 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:39:00] 2025-11-26 15:38:54,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743381202752)>', '<ExcThread(monitor, started 139743018850048)>']
[2025-11-26 10:39:00] 2025-11-26 15:38:59,128 | INFO     | all workflow threads have been joined
[2025-11-26 10:39:00] 2025-11-26 15:38:59,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:39:00] 2025-11-26 15:38:59,128 | INFO     | traces error code: 0
[2025-11-26 10:39:00] 2025-11-26 15:38:59,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:39:00] 2025-11-26 15:39:00,225 | INFO     | PID=3957658 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:39:00] 2025-11-26 15:39:00,225 | INFO     | .. there are 44 such processes running
[2025-11-26 10:39:00] 2025-11-26 15:39:00,225 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:39:00] 2025-11-26 15:39:00,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:39:00] 2025-11-26 15:39:00,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:39:00] 2025-11-26 15:39:00,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:39:00] 2025-11-26 15:39:00,226 | INFO     | [monitor] control thread has ended
[2025-11-26 10:39:00] 2025-11-26 15:39:00,421 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:39:00] 2025-11-26 15:39:00,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:39:00] 2025-11-26 15:39:00,428 [wrapper] pilotpid: 3957658
[2025-11-26 10:39:00] 2025-11-26 15:39:00,452 [wrapper] Pilot exit status: 0
[2025-11-26 10:39:00] 2025-11-26 15:39:00,476 [wrapper] pandaids: 6896219206
[2025-11-26 10:39:00] 2025-11-26 15:39:00,563 [wrapper] cleanup supervisor_pilot 3440966 3957659
[2025-11-26 10:39:00] 2025-11-26 15:39:00,568 [wrapper] Test setup, not cleaning
[2025-11-26 10:39:00] 2025-11-26 15:39:00,573 [wrapper] apfmon messages muted
[2025-11-26 10:39:00] 2025-11-26 15:39:00,576 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:39:00] 2025-11-26 15:39:00,580 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:39:00]  *** Error codes and diagnostics ***
[2025-11-26 10:39:00]     "exeErrorCode": 0,
[2025-11-26 10:39:00]     "exeErrorDiag": "",
[2025-11-26 10:39:00]     "pilotErrorCode": 0,
[2025-11-26 10:39:00]     "pilotErrorDiag": "",
[2025-11-26 10:39:00]  *** Listing of results directory ***
[2025-11-26 10:39:00] total 1322628
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:40 queuedata.json
[2025-11-26 10:39:00] -rwx------. 1 boincer umatlas     36292 Nov 24 14:45 runpilot2-wrapper.sh
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas       100 Nov 25 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:39:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 16:09 run_atlas
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas       105 Nov 25 16:09 job.xml
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas 409974432 Nov 25 16:09 EVNT.47483658._001411.pool.root.1
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:09 start_atlas.sh
[2025-11-26 10:39:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 16:09 shared
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 16:09 input.tar.gz
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas         0 Nov 25 16:09 boinc_lockfile
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 16:09 pandaJob.out
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas        57 Nov 25 16:09 setup.sh.local
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas    991893 Nov 25 16:09 agis_schedconf.cvmfs.json
[2025-11-26 10:39:00] drwx------. 5 boincer umatlas      4096 Nov 25 16:09 pilot3
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:09 boinc_task_state.xml
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      6659 Nov 26 10:36 init_data.xml
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas 918937085 Nov 26 10:37 HITS.47556149._003971.pool.root.1
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas      1061 Nov 26 10:38 memory_monitor_summary.json
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas        95 Nov 26 10:38 pilot_heartbeat.json
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas   2312954 Nov 26 10:38 log.47556149._003971.job.log.tgz.1
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas      8630 Nov 26 10:38 heartbeat.json
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas        29 Nov 26 10:38 wrapper_checkpoint.txt
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:38 boinc_mmap_file
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas       823 Nov 26 10:39 pilotlog.txt
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas   8469999 Nov 26 10:39 log.47556149._003971.job.log.1
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas       353 Nov 26 10:39 output.list
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:39 runtime_log
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas  10803200 Nov 26 10:39 result.tar.gz
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas       658 Nov 26 10:39 tnaKDmvfrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGtLKDmmRXsum.diag
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 10:39 runtime_log.err
[2025-11-26 10:39:00] -rw-r--r--. 1 boincer umatlas      2139 Nov 26 10:39 stderr.txt
[2025-11-26 10:39:00] HITS file was successfully produced:
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas 918937085 Nov 26 10:37 shared/HITS.pool.root.1
[2025-11-26 10:39:00]  *** Contents of shared directory: ***
[2025-11-26 10:39:00] total 1308920
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas 409974432 Nov 25 16:09 ATLAS.root_0
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:09 start_atlas.sh
[2025-11-26 10:39:00] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 16:09 input.tar.gz
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas 918937085 Nov 26 10:37 HITS.pool.root.1
[2025-11-26 10:39:00] -rw-------. 1 boincer umatlas  10803200 Nov 26 10:39 result.tar.gz
10:39:02 (3953469): run_atlas exited; CPU time 305651.457747
10:39:02 (3953469): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN