Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:34 (1436394): wrapper (7.7.26015): starting
09:55:34 (1436394): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 09:55:34] Arguments: --nthreads 12
[2025-11-25 09:55:34] Threads: 12
[2025-11-25 09:55:34] Checking for CVMFS
[2025-11-25 09:55:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:55:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:55:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:55:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:55:34] 2.11.5.0 433116 27225 210608 153292 3 415 30805687 45568001 15111 130560 0 291726001 99.791 177410046 16599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 09:55:34] CVMFS is ok
[2025-11-25 09:55:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:55:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:55:34] Further information can be found at the LHC@home message board.
[2025-11-25 09:55:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:55:34] Checking for apptainer binary...
[2025-11-25 09:55:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:55:34] Running /usr/bin/apptainer --version
[2025-11-25 09:55:34] apptainer version 1.4.1-1.el9
[2025-11-25 09:55:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:55:34] wns0062.triumf.lcg
[2025-11-25 09:55:34] apptainer works
[2025-11-25 09:55:34] Set ATHENA_PROC_NUMBER=12
[2025-11-25 09:55:34] Set ATHENA_CORE_NUMBER=12
[2025-11-25 09:55:34] Starting ATLAS job with PandaID=6891104776
[2025-11-25 09:55:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:59:48]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | wrong length of table data, x=[1764093365.0], y=[1122.0] (must be same and length>=4)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | could have reported an average CPU frequency of 2745 MHz (4 samples)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . Timing measurements:
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . get job = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . initial setup = 2 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload setup = 4 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-in = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload execution = 44 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-out = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . log creation = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891104776/pilotlog.txt
[2025-11-25 09:59:48] 2025-11-25 17:58:52,617 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 09:59:48] - Log from pilotlog.txt -
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891104776/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | extracted standard info from prmon json
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | wrong length of table data, x=[1764093365.0], y=[1122.0] (must be same and length>=4)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | could have reported an average CPU frequency of 2745 MHz (4 samples)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . Timing measurements:
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . get job = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . initial setup = 2 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload setup = 4 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-in = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload execution = 44 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-out = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . log creation = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891104776/pilotlog.txt
[2025-11-25 09:59:48] 2025-11-25 17:58:52,617 | WARNING  | 
[2025-11-25 09:59:48] [begin log extracts]
[2025-11-25 09:59:48] - Log from pilotlog.txt -
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891104776/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | extracted standard info from prmon json
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:59:48] 2025-11-25 17:58:52,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 09:59:48] 2025-11-25 17:58:52,607 | WARNING  | wrong length of table data, x=[1764093365.0], y=[1122.0] (must be same and length>=4)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | could have reported an average CPU frequency of 2745 MHz (4 samples)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . Timing measurements:
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . get job = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . initial setup = 2 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload setup = 4 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-in = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . payload execution = 44 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . stage-out = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | . log creation = 0 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,608 | INFO     | ..............................
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 09:59:48] 2025-11-25 17:58:52,609 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891104776/pilotlog.txt
[2025-11-25 09:59:48] [end log extracts]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,617 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,618 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 09:59:48] 2025-11-25 17:58:52,672 | INFO     | 
[2025-11-25 09:59:48] 2025-11-25 17:58:52,672 | INFO     | job summary report
[2025-11-25 09:59:48] 2025-11-25 17:58:52,672 | INFO     | --------------------------------------------------
[2025-11-25 09:59:48] 2025-11-25 17:58:52,672 | INFO     | PanDA job id: 6891104776
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | task id: 47483661
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 09:56:41,980 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | pilot state: failed 
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | transexitcode: 65
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | exeerrorcode: 65
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | exitcode: 65
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | cpuconsumptiontime: 39 s
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | nevents: 0
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | neventsw: 0
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | pid: 1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | pgrp: 1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | corecount: 12
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | event service: False
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | sizes: {0: 2284301, 3: 2284563, 11: 2284591, 52: 2314387, 55: 2314387, 176: 2314613}
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | --------------------------------------------------
[2025-11-25 09:59:48] 2025-11-25 17:58:52,673 | INFO     | 
[2025-11-25 09:59:48] 2025-11-25 17:58:52,674 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 09:59:48] 2025-11-25 17:58:52,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:59:48] 2025-11-25 17:58:52,689 | INFO     | job 6891104776 has completed (purged errors)
[2025-11-25 09:59:48] 2025-11-25 17:58:52,689 | INFO     | overall cleanup function is called
[2025-11-25 09:59:48] 2025-11-25 17:58:53,696 | INFO     | --- collectZombieJob: --- 10, [1452254]
[2025-11-25 09:59:48] 2025-11-25 17:58:53,696 | INFO     | zombie collector waiting for pid 1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:53,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:59:48] 2025-11-25 17:58:53,696 | INFO     | collected zombie processes
[2025-11-25 09:59:48] 2025-11-25 17:58:53,696 | INFO     | will attempt to kill all subprocesses of pid=1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:53,836 | INFO     | process IDs to be killed: [1452254] (in reverse order)
[2025-11-25 09:59:48] 2025-11-25 17:58:53,889 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:59:48] 2025-11-25 17:58:53,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:59:48] 2025-11-25 17:58:53,895 | INFO     | did not find any defunct processes belonging to 1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:53,900 | INFO     | did not find any defunct processes belonging to 1452254
[2025-11-25 09:59:48] 2025-11-25 17:58:53,900 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:59:48] 2025-11-25 17:58:53,900 | INFO     | ready for new job
[2025-11-25 09:59:48] 2025-11-25 17:58:53,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:59:48] 2025-11-25 17:58:53,902 | INFO     | ***************************************
[2025-11-25 09:59:48] 2025-11-25 17:58:53,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:59:48] 2025-11-25 17:58:53,902 | INFO     | ***************************************
[2025-11-25 09:59:48] 2025-11-25 17:58:53,902 | INFO     | 
[2025-11-25 09:59:48] 2025-11-25 17:58:53,904 | INFO     | architecture information:
[2025-11-25 09:59:48] 2025-11-25 17:58:53,904 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:59:48] 2025-11-25 17:58:53,915 | INFO     | cat /etc/os-release:
[2025-11-25 09:59:48] NAME="CentOS Linux"
[2025-11-25 09:59:48] VERSION="7 (Core)"
[2025-11-25 09:59:48] ID="centos"
[2025-11-25 09:59:48] ID_LIKE="rhel fedora"
[2025-11-25 09:59:48] VERSION_ID="7"
[2025-11-25 09:59:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:59:48] ANSI_COLOR="0;31"
[2025-11-25 09:59:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:59:48] HOME_URL="https://www.centos.org/"
[2025-11-25 09:59:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:59:48] 
[2025-11-25 09:59:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:59:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:59:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:59:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:59:48] 
[2025-11-25 09:59:48] 2025-11-25 17:58:53,915 | INFO     | ***************************************
[2025-11-25 09:59:48] 2025-11-25 17:58:54,418 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 09:59:48] 2025-11-25 17:58:54,428 | INFO     | sufficient remaining disk space (1997946224640 B)
[2025-11-25 09:59:48] 2025-11-25 17:58:54,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:59:48] 2025-11-25 17:58:54,429 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:59:48] 2025-11-25 17:58:54,429 | INFO     | update_server=False
[2025-11-25 09:59:48] 2025-11-25 17:58:54,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:59:48] 2025-11-25 17:58:54,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:59:48] 2025-11-25 17:58:54,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:59:48] 2025-11-25 17:58:54,493 | INFO     | aborting loop
[2025-11-25 09:59:48] 2025-11-25 17:58:54,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:59:48] 2025-11-25 17:58:54,781 | INFO     | all payload control threads have been joined
[2025-11-25 09:59:48] 2025-11-25 17:58:54,888 | INFO     | all job control threads have been joined
[2025-11-25 09:59:48] 2025-11-25 17:58:55,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:59:48] 2025-11-25 17:58:55,285 | INFO     | all data control threads have been joined
[2025-11-25 09:59:48] 2025-11-25 17:58:55,434 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:55,434 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:55,498 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:55,786 | INFO     | [payload] control thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:55,890 | INFO     | [job] control thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,030 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,033 | INFO     | [job] validate thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,165 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,252 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,291 | INFO     | [data] control thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,440 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,520 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:56,760 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:57,018 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:58:59,241 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:59:48] 2025-11-25 17:59:24,643 | INFO     | PID=1440170 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 09:59:48] 2025-11-25 17:59:24,644 | INFO     | .. there are 18 such processes running
[2025-11-25 09:59:48] 2025-11-25 17:59:24,644 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:59:48] 2025-11-25 17:59:24,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:59:48] 2025-11-25 17:59:24,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:59:48] 2025-11-25 17:59:42,463 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:59:48] 2025-11-25 17:59:43,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812352239424)>', '<ExcThread(monitor, started 139811939653376)>']
[2025-11-25 09:59:48] 2025-11-25 17:59:43,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:59:48] 2025-11-25 17:59:43,732 | INFO     | [monitor] control thread has ended
[2025-11-25 09:59:48] 2025-11-25 17:59:48,251 | INFO     | all workflow threads have been joined
[2025-11-25 09:59:48] 2025-11-25 17:59:48,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:59:48] 2025-11-25 17:59:48,252 | INFO     | traces error code: 0
[2025-11-25 09:59:48] 2025-11-25 17:59:48,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:59:48] 2025-11-25 17:59:48,343 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:59:48] 2025-11-25 17:59:48,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:59:48] 2025-11-25 17:59:48,346 [wrapper] pilotpid: 1440170
[2025-11-25 09:59:48] 2025-11-25 17:59:48,348 [wrapper] Pilot exit status: 0
[2025-11-25 09:59:48] 2025-11-25 17:59:48,354 [wrapper] pandaids: 6891104776
[2025-11-25 09:59:48] 2025-11-25 17:59:48,387 [wrapper] cleanup supervisor_pilot 1440176 1440171
[2025-11-25 09:59:48] 2025-11-25 17:59:48,389 [wrapper] Test setup, not cleaning
[2025-11-25 09:59:48] 2025-11-25 17:59:48,391 [wrapper] apfmon messages muted
[2025-11-25 09:59:48] 2025-11-25 17:59:48,392 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:59:48] 2025-11-25 17:59:48,394 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:59:48]  *** Error codes and diagnostics ***
[2025-11-25 09:59:48]     "exeErrorCode": 65,
[2025-11-25 09:59:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 09:59:48]     "pilotErrorCode": 1305,
[2025-11-25 09:59:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 09:59:48]  *** Listing of results directory ***
[2025-11-25 09:59:48] total 405436
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc    576529 Nov 17 22:54 pilot3.tar.gz
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc      5112 Nov 17 22:57 queuedata.json
[2025-11-25 09:59:48] -rwx------. 1 boinc boinc     36292 Nov 17 22:58 runpilot2-wrapper.sh
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc       100 Nov 25 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:59:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 09:55 run_atlas
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc       105 Nov 25 09:55 job.xml
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc      6595 Nov 25 09:55 init_data.xml
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc 410970329 Nov 25 09:55 EVNT.47483658._000226.pool.root.1
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc     15120 Nov 25 09:55 start_atlas.sh
[2025-11-25 09:59:48] drwxrwx--x. 2 boinc boinc      4096 Nov 25 09:55 shared
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc    590098 Nov 25 09:55 input.tar.gz
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc         0 Nov 25 09:55 boinc_lockfile
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc      2773 Nov 25 09:55 pandaJob.out
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc    991543 Nov 25 09:55 agis_schedconf.cvmfs.json
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc   1516240 Nov 25 09:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:59:48] drwx------. 5 boinc boinc      4096 Nov 25 09:55 pilot3
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc       524 Nov 25 09:56 boinc_task_state.xml
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc       995 Nov 25 09:56 memory_monitor_summary.json
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc     46729 Nov 25 09:56 log.47483661._001959.job.log.tgz.1
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc        95 Nov 25 09:58 pilot_heartbeat.json
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc     10320 Nov 25 09:58 heartbeat.json
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc      8192 Nov 25 09:59 boinc_mmap_file
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc        23 Nov 25 09:59 wrapper_checkpoint.txt
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc      4823 Nov 25 09:59 pilotlog.txt
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc     92561 Nov 25 09:59 log.47483661._001959.job.log.1
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc       186 Nov 25 09:59 output.list
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc       620 Nov 25 09:59 runtime_log
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc    163840 Nov 25 09:59 result.tar.gz
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc       644 Nov 25 09:59 SLGODmRqUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDm66qMDmbnVx1n.diag
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc      8528 Nov 25 09:59 runtime_log.err
[2025-11-25 09:59:48] -rw-r--r--. 1 boinc boinc     22381 Nov 25 09:59 stderr.txt
[2025-11-25 09:59:48] No HITS result produced
[2025-11-25 09:59:48]  *** Contents of shared directory: ***
[2025-11-25 09:59:48] total 402100
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc 410970329 Nov 25 09:55 ATLAS.root_0
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc     15120 Nov 25 09:55 start_atlas.sh
[2025-11-25 09:59:48] -rw-r--r--. 2 boinc boinc    590098 Nov 25 09:55 input.tar.gz
[2025-11-25 09:59:48] -rw-------. 1 boinc boinc    163840 Nov 25 09:59 result.tar.gz
09:59:49 (1436394): run_atlas exited; CPU time 38.453023
09:59:49 (1436394): called boinc_finish(0)

</stderr_txt>
]]>

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