Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:11 (11003): wrapper (7.7.26015): starting
12:30:11 (11003): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:30:11] Arguments: --nthreads 12
[2025-11-25 12:30:11] Threads: 12
[2025-11-25 12:30:11] Checking for CVMFS
[2025-11-25 12:30:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:30:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:30:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:30:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:30:12] 2.11.2.0 30551 116485 92080 153291 0 81 16931674 20275200 1 130560 0 51743193 99.916 6353862 28888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:30:12] CVMFS is ok
[2025-11-25 12:30:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:30:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:30:12] Further information can be found at the LHC@home message board.
[2025-11-25 12:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:30:12] Checking for apptainer binary...
[2025-11-25 12:30:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:30:12] Running /usr/bin/apptainer --version
[2025-11-25 12:30:12] apptainer version 1.3.2-1.el7
[2025-11-25 12:30:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:30:13] c-205-16.aglt2.org
[2025-11-25 12:30:13] apptainer works
[2025-11-25 12:30:13] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:30:13] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:30:13] Starting ATLAS job with PandaID=6896218913
[2025-11-25 12:30:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:30:29 (26971): wrapper (7.7.26015): starting
17:30:29 (26971): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 17:30:29] Arguments: --nthreads 12
[2025-11-25 17:30:29] Threads: 12
[2025-11-25 17:30:29] This job has been restarted, cleaning up previous attempt
[2025-11-25 17:30:29] Checking for CVMFS
[2025-11-25 17:30:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:30:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:30:30] 2.11.2.0 30551 116785 93628 153300 0 49 17281184 20275200 1 130560 0 51878984 99.917 6368309 28916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 17:30:30] CVMFS is ok
[2025-11-25 17:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:30:30] Further information can be found at the LHC@home message board.
[2025-11-25 17:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:30:30] Checking for apptainer binary...
[2025-11-25 17:30:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:30:30] Running /usr/bin/apptainer --version
[2025-11-25 17:30:30] apptainer version 1.3.2-1.el7
[2025-11-25 17:30:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:30:32] c-205-16.aglt2.org
[2025-11-25 17:30:32] apptainer works
[2025-11-25 17:30:32] Set ATHENA_PROC_NUMBER=12
[2025-11-25 17:30:32] Set ATHENA_CORE_NUMBER=12
[2025-11-25 17:30:32] Starting ATLAS job with PandaID=6896218913
[2025-11-25 17:30:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:43:36]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:43:36] 2025-11-26 05:42:48,921 | INFO     | time since job start (25920s) is within the limit (172800.0s)
[2025-11-26 00:43:36] 2025-11-26 05:42:50,330 | INFO     | monitor loop #1941: job 0:6896218913 is in state 'finished'
[2025-11-26 00:43:36] 2025-11-26 05:42:50,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:43:36] 2025-11-26 05:42:50,927 | INFO     | time since job start (25922s) is within the limit (172800.0s)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,063 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 00:43:36] 2025-11-26 05:42:52,066 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-26 00:43:36] 2025-11-26 05:42:52,069 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896218913/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,070 | INFO     | extracted standard info from prmon json
[2025-11-26 00:43:36] 2025-11-26 05:42:52,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:43:36] 2025-11-26 05:42:52,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:43:36] 2025-11-26 05:42:52,077 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:43:36] 2025-11-26 05:42:52,078 | INFO     | sum of square deviations: 23803499255.519913
[2025-11-26 00:43:36] 2025-11-26 05:42:52,081 | INFO     | sum of deviations: 340431623374.1598
[2025-11-26 00:43:36] 2025-11-26 05:42:52,082 | INFO     | mean x: 1764122810.24
[2025-11-26 00:43:36] 2025-11-26 05:42:52,082 | INFO     | mean y: 3423902.0376470587
[2025-11-26 00:43:36] 2025-11-26 05:42:52,082 | INFO     | intersect: -25226614155.58619
[2025-11-26 00:43:36] 2025-11-26 05:42:52,082 | INFO     | chi2: 6.099493781082728
[2025-11-26 00:43:36] 2025-11-26 05:42:52,083 | INFO     | sum of square deviations: 22973245030.228535
[2025-11-26 00:43:36] 2025-11-26 05:42:52,087 | INFO     | sum of deviations: 512284992169.4852
[2025-11-26 00:43:36] 2025-11-26 05:42:52,087 | INFO     | mean x: 1764122657.7428572
[2025-11-26 00:43:36] 2025-11-26 05:42:52,087 | INFO     | mean y: 3455438.495238095
[2025-11-26 00:43:36] 2025-11-26 05:42:52,087 | INFO     | intersect: -39335069037.20095
[2025-11-26 00:43:36] 2025-11-26 05:42:52,088 | INFO     | chi2: 2.782867129100321
[2025-11-26 00:43:36] 2025-11-26 05:42:52,088 | INFO     | current chi2=2.782867129100321 (change=54.37544115986736 %)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,088 | INFO     | sum of square deviations: 22162526054.930126
[2025-11-26 00:43:36] 2025-11-26 05:42:52,092 | INFO     | sum of deviations: 558796457608.3452
[2025-11-26 00:43:36] 2025-11-26 05:42:52,092 | INFO     | mean x: 1764122505.245783
[2025-11-26 00:43:36] 2025-11-26 05:42:52,092 | INFO     | mean y: 3464151.339759036
[2025-11-26 00:43:36] 2025-11-26 05:42:52,092 | INFO     | intersect: -44476366544.63868
[2025-11-26 00:43:36] 2025-11-26 05:42:52,093 | INFO     | chi2: 2.350420284995686
[2025-11-26 00:43:36] 2025-11-26 05:42:52,093 | INFO     | current chi2=2.350420284995686 (change=15.539615225698606 %)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,093 | INFO     | right removable region: 414
[2025-11-26 00:43:36] 2025-11-26 05:42:52,093 | INFO     | sum of square deviations: 22973208612.711945
[2025-11-26 00:43:36] 2025-11-26 05:42:52,097 | INFO     | sum of deviations: 208998283672.91864
[2025-11-26 00:43:36] 2025-11-26 05:42:52,097 | INFO     | mean x: 1764122962.7404761
[2025-11-26 00:43:36] 2025-11-26 05:42:52,097 | INFO     | mean y: 3447955.6047619046
[2025-11-26 00:43:36] 2025-11-26 05:42:52,097 | INFO     | intersect: -16045623709.4098
[2025-11-26 00:43:36] 2025-11-26 05:42:52,098 | INFO     | chi2: 3.895539652782623
[2025-11-26 00:43:36] 2025-11-26 05:42:52,098 | INFO     | current chi2=3.895539652782623 (change=36.13339413732263 %)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,098 | INFO     | sum of square deviations: 22162427722.419178
[2025-11-26 00:43:36] 2025-11-26 05:42:52,102 | INFO     | sum of deviations: 177200728461.14493
[2025-11-26 00:43:36] 2025-11-26 05:42:52,102 | INFO     | mean x: 1764123115.2433734
[2025-11-26 00:43:36] 2025-11-26 05:42:52,102 | INFO     | mean y: 3453929.325301205
[2025-11-26 00:43:36] 2025-11-26 05:42:52,103 | INFO     | intersect: -14101675031.796799
[2025-11-26 00:43:36] 2025-11-26 05:42:52,103 | INFO     | chi2: 3.8433472726921143
[2025-11-26 00:43:36] 2025-11-26 05:42:52,103 | INFO     | current chi2=3.8433472726921143 (change=1.3397984552211424 %)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,103 | INFO     | left removable region: 20
[2025-11-26 00:43:36] 2025-11-26 05:42:52,104 | INFO     | sum of square deviations: 18965410734.61949
[2025-11-26 00:43:36] 2025-11-26 05:42:52,108 | INFO     | sum of deviations: 355186748048.5736
[2025-11-26 00:43:36] 2025-11-26 05:42:52,108 | INFO     | mean x: 1764123084.746193
[2025-11-26 00:43:36] 2025-11-26 05:42:52,108 | INFO     | mean y: 3503022.2157360404
[2025-11-26 00:43:36] 2025-11-26 05:42:52,108 | INFO     | intersect: -33035229984.743843
[2025-11-26 00:43:36] 2025-11-26 05:42:52,109 | INFO     | chi2: 0.04037474917099998
[2025-11-26 00:43:36] 2025-11-26 05:42:52,109 | INFO     | current memory leak: 18.73 B/s (using 394 data points, chi2=0.04)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,109 | INFO     | could have reported an average CPU frequency of 2384 MHz (18 samples)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,109 | INFO     | ..............................
[2025-11-26 00:43:36] 2025-11-26 05:42:52,109 | INFO     | . Timing measurements:
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . get job = 0 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . initial setup = 2 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . payload setup = 7 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . stage-in = 0 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . payload execution = 25886 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . stage-out = 3 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | . log creation = 0 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,110 | INFO     | ..............................
[2025-11-26 00:43:36] 2025-11-26 05:42:52,541 | INFO     | 
[2025-11-26 00:43:36] 2025-11-26 05:42:52,541 | INFO     | job summary report
[2025-11-26 00:43:36] 2025-11-26 05:42:52,541 | INFO     | --------------------------------------------------
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | PanDA job id: 6896218913
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | task id: 47556149
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | errors: (none)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | pilot state: finished 
[2025-11-26 00:43:36] 2025-11-26 05:42:52,542 | INFO     | transexitcode: 0
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | exeerrorcode: 0
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | exeerrordiag: 
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | exitcode: 0
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | exitmsg: OK
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | cpuconsumptiontime: 296935 s
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | nevents: 1000
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | neventsw: 0
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | pid: 5280
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | pgrp: 5280
[2025-11-26 00:43:36] 2025-11-26 05:42:52,543 | INFO     | corecount: 12
[2025-11-26 00:43:36] 2025-11-26 05:42:52,544 | INFO     | event service: False
[2025-11-26 00:43:36] 2025-11-26 05:42:52,544 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 25898: 2321925, 25902: 2330975, 25907: 2331165}
[2025-11-26 00:43:36] 2025-11-26 05:42:52,544 | INFO     | --------------------------------------------------
[2025-11-26 00:43:36] 2025-11-26 05:42:52,544 | INFO     | 
[2025-11-26 00:43:36] 2025-11-26 05:42:52,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 00:43:36] 2025-11-26 05:42:52,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:43:36] 2025-11-26 05:42:52,611 | INFO     | job 6896218913 has completed (purged errors)
[2025-11-26 00:43:36] 2025-11-26 05:42:52,611 | INFO     | overall cleanup function is called
[2025-11-26 00:43:36] 2025-11-26 05:42:53,628 | INFO     | --- collectZombieJob: --- 10, [5280]
[2025-11-26 00:43:36] 2025-11-26 05:42:53,628 | INFO     | zombie collector waiting for pid 5280
[2025-11-26 00:43:36] 2025-11-26 05:42:53,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:43:36] 2025-11-26 05:42:53,628 | INFO     | collected zombie processes
[2025-11-26 00:43:36] 2025-11-26 05:42:53,628 | INFO     | will attempt to kill all subprocesses of pid=5280
[2025-11-26 00:43:36] 2025-11-26 05:42:53,718 | INFO     | process IDs to be killed: [5280] (in reverse order)
[2025-11-26 00:43:36] 2025-11-26 05:42:53,770 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:43:36] 2025-11-26 05:42:53,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:43:36] 2025-11-26 05:42:53,773 | INFO     | did not find any defunct processes belonging to 5280
[2025-11-26 00:43:36] 2025-11-26 05:42:53,776 | INFO     | did not find any defunct processes belonging to 5280
[2025-11-26 00:43:36] 2025-11-26 05:42:53,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:43:36] 2025-11-26 05:42:53,778 | INFO     | ready for new job
[2025-11-26 00:43:36] 2025-11-26 05:42:53,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:43:36] 2025-11-26 05:42:53,780 | INFO     | ***************************************
[2025-11-26 00:43:36] 2025-11-26 05:42:53,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:43:36] 2025-11-26 05:42:53,780 | INFO     | ***************************************
[2025-11-26 00:43:36] 2025-11-26 05:42:53,780 | INFO     | 
[2025-11-26 00:43:36] 2025-11-26 05:42:53,781 | INFO     | architecture information:
[2025-11-26 00:43:36] 2025-11-26 05:42:53,781 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:43:36] 2025-11-26 05:42:53,797 | INFO     | cat /etc/os-release:
[2025-11-26 00:43:36] NAME="CentOS Linux"
[2025-11-26 00:43:36] VERSION="7 (Core)"
[2025-11-26 00:43:36] ID="centos"
[2025-11-26 00:43:36] ID_LIKE="rhel fedora"
[2025-11-26 00:43:36] VERSION_ID="7"
[2025-11-26 00:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:43:36] ANSI_COLOR="0;31"
[2025-11-26 00:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:43:36] HOME_URL="https://www.centos.org/"
[2025-11-26 00:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:43:36] 
[2025-11-26 00:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:43:36] 
[2025-11-26 00:43:36] 2025-11-26 05:42:53,797 | INFO     | ***************************************
[2025-11-26 00:43:36] 2025-11-26 05:42:54,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 00:43:36] 2025-11-26 05:42:54,317 | INFO     | sufficient remaining disk space (28386000896 B)
[2025-11-26 00:43:36] 2025-11-26 05:42:54,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:43:36] 2025-11-26 05:42:54,317 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:43:36] 2025-11-26 05:42:54,317 | INFO     | update_server=False
[2025-11-26 00:43:36] 2025-11-26 05:42:54,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:43:36] 2025-11-26 05:42:54,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:43:36] 2025-11-26 05:42:54,318 | INFO     | aborting loop
[2025-11-26 00:43:36] 2025-11-26 05:42:54,575 | INFO     | all payload control threads have been joined
[2025-11-26 00:43:36] 2025-11-26 05:42:54,620 | INFO     | all data control threads have been joined
[2025-11-26 00:43:36] 2025-11-26 05:42:54,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:43:36] 2025-11-26 05:42:55,323 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,324 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,531 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,576 | INFO     | [payload] control thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,626 | INFO     | [data] control thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,780 | INFO     | all job control threads have been joined
[2025-11-26 00:43:36] 2025-11-26 05:42:55,846 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:55,919 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,048 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,097 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,450 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,508 | INFO     | [job] validate thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,725 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:56,784 | INFO     | [job] control thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:42:57,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:43:36] 2025-11-26 05:42:57,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:43:36] 2025-11-26 05:42:58,202 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:43:01,720 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:43:36] 2025-11-26 05:43:24,111 | INFO     | PID=31047 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:43:36] 2025-11-26 05:43:24,111 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:43:36] 2025-11-26 05:43:24,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:43:36] 2025-11-26 05:43:24,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:43:36] 2025-11-26 05:43:30,502 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:43:36] 2025-11-26 05:43:30,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238189287232)>', '<ExcThread(monitor, started 140236789118720)>']
[2025-11-26 00:43:36] 2025-11-26 05:43:31,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:43:36] 2025-11-26 05:43:31,139 | INFO     | [monitor] control thread has ended
[2025-11-26 00:43:36] 2025-11-26 05:43:35,715 | INFO     | all workflow threads have been joined
[2025-11-26 00:43:36] 2025-11-26 05:43:35,715 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:43:36] 2025-11-26 05:43:35,725 | INFO     | traces error code: 0
[2025-11-26 00:43:36] 2025-11-26 05:43:35,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:43:36] 2025-11-26 05:43:35,814 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:43:36] 2025-11-26 05:43:35,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:43:36] 2025-11-26 05:43:35,822 [wrapper] pilotpid: 31047
[2025-11-26 00:43:36] 2025-11-26 05:43:35,826 [wrapper] Pilot exit status: 0
[2025-11-26 00:43:36] 2025-11-26 05:43:35,840 [wrapper] pandaids: 6896218913 6896218913
[2025-11-26 00:43:36] 2025-11-26 05:43:35,886 [wrapper] cleanup supervisor_pilot 10291 31048
[2025-11-26 00:43:36] 2025-11-26 05:43:35,890 [wrapper] Test setup, not cleaning
[2025-11-26 00:43:36] 2025-11-26 05:43:35,894 [wrapper] apfmon messages muted
[2025-11-26 00:43:36] 2025-11-26 05:43:35,898 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:43:36] 2025-11-26 05:43:35,902 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:43:36]  *** Error codes and diagnostics ***
[2025-11-26 00:43:36]     "exeErrorCode": 0,
[2025-11-26 00:43:36]     "exeErrorDiag": "",
[2025-11-26 00:43:36]     "pilotErrorCode": 0,
[2025-11-26 00:43:36]     "pilotErrorDiag": "",
[2025-11-26 00:43:36]  *** Listing of results directory ***
[2025-11-26 00:43:36] total 1713632
[2025-11-26 00:43:36] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 14:46 queuedata.json
[2025-11-26 00:43:36] -rwx------ 1 boincer umatlas     36292 Nov 24 14:46 runpilot2-wrapper.sh
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas       100 Nov 25 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:43:36] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 12:30 run_atlas
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas       105 Nov 25 12:30 job.xml
[2025-11-26 00:43:36] -rw-r--r-- 3 boincer umatlas 408621800 Nov 25 12:30 EVNT.47483658._001408.pool.root.1
[2025-11-26 00:43:36] -rw-r--r-- 3 boincer umatlas 408621800 Nov 25 12:30 ATLAS.root_0
[2025-11-26 00:43:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:30 start_atlas.sh
[2025-11-26 00:43:36] drwxrwx--x 2 boincer umatlas      4096 Nov 25 12:30 shared
[2025-11-26 00:43:36] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 12:30 input.tar.gz
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas         0 Nov 25 12:30 boinc_lockfile
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 17:30 pandaJob.out
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas        57 Nov 25 17:30 setup.sh.local
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas    991877 Nov 25 17:30 agis_schedconf.cvmfs.json
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas       532 Nov 26 00:33 boinc_task_state.xml
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 00:38 init_data.xml
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas 922013983 Nov 26 00:42 HITS.47556149._003943.pool.root.1
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas      1061 Nov 26 00:42 memory_monitor_summary.json
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas   1516240 Nov 26 00:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas   2164859 Nov 26 00:42 log.47556149._003943.job.log.tgz.1
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas      8662 Nov 26 00:42 heartbeat.json
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 00:43 boinc_mmap_file
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas        29 Nov 26 00:43 wrapper_checkpoint.txt
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas        96 Nov 26 00:43 pilot_heartbeat.json
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas      4746 Nov 26 00:43 pilotlog.txt
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas   3622888 Nov 26 00:43 log.47556149._003943.job.log.1
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas       353 Nov 26 00:43 output.list
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas       620 Nov 26 00:43 runtime_log
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas   5806080 Nov 26 00:43 result.tar.gz
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas       795 Nov 26 00:43 ubiNDmGhrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOtLKDmpkh42m.diag
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas      9430 Nov 26 00:43 runtime_log.err
[2025-11-26 00:43:36] -rw-r--r-- 1 boincer umatlas     23439 Nov 26 00:43 stderr.txt
[2025-11-26 00:43:36] HITS file was successfully produced:
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas 922013983 Nov 26 00:42 shared/HITS.pool.root.1
[2025-11-26 00:43:36]  *** Contents of shared directory: ***
[2025-11-26 00:43:36] total 1305728
[2025-11-26 00:43:36] -rw-r--r-- 3 boincer umatlas 408621800 Nov 25 12:30 ATLAS.root_0
[2025-11-26 00:43:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:30 start_atlas.sh
[2025-11-26 00:43:36] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 12:30 input.tar.gz
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas 922013983 Nov 26 00:42 HITS.pool.root.1
[2025-11-26 00:43:36] -rw------- 1 boincer umatlas   5806080 Nov 26 00:43 result.tar.gz
00:43:37 (26971): run_atlas exited; CPU time 290269.357968
00:43:37 (26971): called boinc_finish(0)

</stderr_txt>
]]>

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