Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:39:21 (2405212): wrapper (7.7.26015): starting
12:39:21 (2405212): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:39:21] Arguments: --nthreads 8
[2025-11-25 12:39:21] Threads: 8
[2025-11-25 12:39:21] Checking for CVMFS
[2025-11-25 12:39:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:39:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:39:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:39:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:39:23] 2.13.2.0 11666 33275 284560 153291 3 420 21891381 40960001 23515 16776704 0 56069285 99.775 28071955 35126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:39:23] CVMFS is ok
[2025-11-25 12:39:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:39:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:39:23] Further information can be found at the LHC@home message board.
[2025-11-25 12:39:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:39:23] Checking for apptainer binary...
[2025-11-25 12:39:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:39:23] Running /usr/bin/apptainer --version
[2025-11-25 12:39:23] apptainer version 1.4.4-1.el9
[2025-11-25 12:39:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:39:24] c-211-33-2.aglt2.org
[2025-11-25 12:39:24] apptainer works
[2025-11-25 12:39:24] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:39:24] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:39:24] Starting ATLAS job with PandaID=6894053155
[2025-11-25 12:39:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:55:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:55:43] 2025-11-26 01:54:55,824 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 20:55:43] 2025-11-26 01:54:55,836 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2646.4812604166673
[2025-11-25 20:55:43] 2025-11-26 01:54:55,854 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894053155/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,854 | INFO     | extracted standard info from prmon json
[2025-11-25 20:55:43] 2025-11-26 01:54:55,855 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:55:43] 2025-11-26 01:54:55,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:55:43] 2025-11-26 01:54:55,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 20:55:43] 2025-11-26 01:54:55,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 20:55:43] 2025-11-26 01:54:55,863 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:55:43] 2025-11-26 01:54:55,864 | INFO     | sum of square deviations: 35156596719.652916
[2025-11-25 20:55:43] 2025-11-26 01:54:55,869 | INFO     | sum of deviations: 410178537414.4216
[2025-11-25 20:55:43] 2025-11-26 01:54:55,869 | INFO     | mean x: 1764107327.214876
[2025-11-25 20:55:43] 2025-11-26 01:54:55,869 | INFO     | mean y: 2501485.0247933883
[2025-11-25 20:55:43] 2025-11-26 01:54:55,869 | INFO     | intersect: -20579666040.723305
[2025-11-25 20:55:43] 2025-11-26 01:54:55,870 | INFO     | chi2: 7.653843729710057
[2025-11-25 20:55:43] 2025-11-26 01:54:55,871 | INFO     | sum of square deviations: 34078337842.071163
[2025-11-25 20:55:43] 2025-11-26 01:54:55,876 | INFO     | sum of deviations: 475052901673.78253
[2025-11-25 20:55:43] 2025-11-26 01:54:55,876 | INFO     | mean x: 1764107174.7223382
[2025-11-25 20:55:43] 2025-11-26 01:54:55,876 | INFO     | mean y: 2510599.9081419623
[2025-11-25 20:55:43] 2025-11-26 01:54:55,876 | INFO     | intersect: -24589188563.91621
[2025-11-25 20:55:43] 2025-11-26 01:54:55,877 | INFO     | chi2: 6.009747969955128
[2025-11-25 20:55:43] 2025-11-26 01:54:55,877 | INFO     | current chi2=6.009747969955128 (change=21.48065492078202 %)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,877 | INFO     | right removable region: 478
[2025-11-25 20:55:43] 2025-11-26 01:54:55,878 | INFO     | sum of square deviations: 34078126782.071114
[2025-11-25 20:55:43] 2025-11-26 01:54:55,883 | INFO     | sum of deviations: 263968133544.51367
[2025-11-25 20:55:43] 2025-11-26 01:54:55,883 | INFO     | mean x: 1764107479.7223382
[2025-11-25 20:55:43] 2025-11-26 01:54:55,883 | INFO     | mean y: 2522147.7557411273
[2025-11-25 20:55:43] 2025-11-26 01:54:55,883 | INFO     | intersect: -13662200733.644386
[2025-11-25 20:55:43] 2025-11-26 01:54:55,884 | INFO     | chi2: 4.372426177496988
[2025-11-25 20:55:43] 2025-11-26 01:54:55,884 | INFO     | current chi2=4.372426177496988 (change=42.87280571819796 %)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,885 | INFO     | sum of square deviations: 33022023622.295433
[2025-11-25 20:55:43] 2025-11-26 01:54:55,890 | INFO     | sum of deviations: 154435028605.2402
[2025-11-25 20:55:43] 2025-11-26 01:54:55,890 | INFO     | mean x: 1764107632.2236288
[2025-11-25 20:55:43] 2025-11-26 01:54:55,890 | INFO     | mean y: 2537952.139240506
[2025-11-25 20:55:43] 2025-11-26 01:54:55,890 | INFO     | intersect: -8247713933.127892
[2025-11-25 20:55:43] 2025-11-26 01:54:55,891 | INFO     | chi2: 2.6213353385639633
[2025-11-25 20:55:43] 2025-11-26 01:54:55,891 | INFO     | current chi2=2.6213353385639633 (change=40.04849408196168 %)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,892 | INFO     | sum of square deviations: 31987967755.518116
[2025-11-25 20:55:43] 2025-11-26 01:54:55,897 | INFO     | sum of deviations: 103903281432.28574
[2025-11-25 20:55:43] 2025-11-26 01:54:55,897 | INFO     | mean x: 1764107784.7249467
[2025-11-25 20:55:43] 2025-11-26 01:54:55,897 | INFO     | mean y: 2545393.4285714286
[2025-11-25 20:55:43] 2025-11-26 01:54:55,897 | INFO     | intersect: -5727627558.916691
[2025-11-25 20:55:43] 2025-11-26 01:54:55,898 | INFO     | chi2: 2.2560618794554457
[2025-11-25 20:55:43] 2025-11-26 01:54:55,898 | INFO     | current chi2=2.2560618794554457 (change=13.934632999249308 %)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,898 | INFO     | left removable region: 30
[2025-11-25 20:55:43] 2025-11-26 01:54:55,898 | INFO     | sum of square deviations: 27880436732.0
[2025-11-25 20:55:43] 2025-11-26 01:54:55,903 | INFO     | sum of deviations: 111183151457.99994
[2025-11-25 20:55:43] 2025-11-26 01:54:55,903 | INFO     | mean x: 1764108059.25
[2025-11-25 20:55:43] 2025-11-26 01:54:55,903 | INFO     | mean y: 2564452.839285714
[2025-11-25 20:55:43] 2025-11-26 01:54:55,903 | INFO     | intersect: -7032443478.537586
[2025-11-25 20:55:43] 2025-11-26 01:54:55,904 | INFO     | chi2: 0.4057931793307795
[2025-11-25 20:55:43] 2025-11-26 01:54:55,904 | INFO     | current memory leak: 3.99 B/s (using 448 data points, chi2=0.41)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | could have reported an average CPU frequency of 2603 MHz (20 samples)
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | ..............................
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . Timing measurements:
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . get job = 0 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . initial setup = 8 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . payload setup = 49 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . stage-in = 0 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . payload execution = 29516 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,905 | INFO     | . stage-out = 2 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,906 | INFO     | . log creation = 0 s
[2025-11-25 20:55:43] 2025-11-26 01:54:55,906 | INFO     | ..............................
[2025-11-25 20:55:43] 2025-11-26 01:54:56,296 | INFO     | 
[2025-11-25 20:55:43] 2025-11-26 01:54:56,296 | INFO     | job summary report
[2025-11-25 20:55:43] 2025-11-26 01:54:56,296 | INFO     | --------------------------------------------------
[2025-11-25 20:55:43] 2025-11-26 01:54:56,296 | INFO     | PanDA job id: 6894053155
[2025-11-25 20:55:43] 2025-11-26 01:54:56,296 | INFO     | task id: 47523618
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | errors: (none)
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | pilot state: finished 
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | transexitcode: 0
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | exeerrorcode: 0
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | exeerrordiag: 
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | exitcode: 0
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | exitmsg: OK
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | cpuconsumptiontime: 88611 s
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | nevents: 400
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | neventsw: 0
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | pid: 2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:56,297 | INFO     | pgrp: 2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | corecount: 8
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | event service: False
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | sizes: {0: 2283115, 1: 2283800, 2: 2283999, 13: 2283999, 24: 2284055, 33: 2284345, 35: 2284529, 29569: 2322360, 29570: 2322359, 29572: 2331413, 29575: 2331469, 295
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | --------------------------------------------------
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | 
[2025-11-25 20:55:43] 2025-11-26 01:54:56,298 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 20:55:43] 2025-11-26 01:54:56,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | job 6894053155 has completed (purged errors)
[2025-11-25 20:55:43] 2025-11-26 01:54:56,366 | INFO     | overall cleanup function is called
[2025-11-25 20:55:43] 2025-11-26 01:54:57,392 | INFO     | --- collectZombieJob: --- 10, [2419619]
[2025-11-25 20:55:43] 2025-11-26 01:54:57,392 | INFO     | zombie collector waiting for pid 2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:57,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:55:43] 2025-11-26 01:54:57,392 | INFO     | collected zombie processes
[2025-11-25 20:55:43] 2025-11-26 01:54:57,392 | INFO     | will attempt to kill all subprocesses of pid=2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:57,877 | INFO     | process IDs to be killed: [2419619] (in reverse order)
[2025-11-25 20:55:43] 2025-11-26 01:54:57,975 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:55:43] 2025-11-26 01:54:57,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:55:43] 2025-11-26 01:54:57,987 | INFO     | did not find any defunct processes belonging to 2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:57,999 | INFO     | did not find any defunct processes belonging to 2419619
[2025-11-25 20:55:43] 2025-11-26 01:54:58,000 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:55:43] 2025-11-26 01:54:58,001 | INFO     | ready for new job
[2025-11-25 20:55:43] 2025-11-26 01:54:58,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:55:43] 2025-11-26 01:54:58,003 | INFO     | ***************************************
[2025-11-25 20:55:43] 2025-11-26 01:54:58,004 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:55:43] 2025-11-26 01:54:58,004 | INFO     | ***************************************
[2025-11-25 20:55:43] 2025-11-26 01:54:58,004 | INFO     | 
[2025-11-25 20:55:43] 2025-11-26 01:54:58,009 | INFO     | architecture information:
[2025-11-25 20:55:43] 2025-11-26 01:54:58,009 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:55:43] 2025-11-26 01:54:58,028 | INFO     | cat /etc/os-release:
[2025-11-25 20:55:43] NAME="CentOS Linux"
[2025-11-25 20:55:43] VERSION="7 (Core)"
[2025-11-25 20:55:43] ID="centos"
[2025-11-25 20:55:43] ID_LIKE="rhel fedora"
[2025-11-25 20:55:43] VERSION_ID="7"
[2025-11-25 20:55:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:55:43] ANSI_COLOR="0;31"
[2025-11-25 20:55:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:55:43] HOME_URL="https://www.centos.org/"
[2025-11-25 20:55:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:55:43] 
[2025-11-25 20:55:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:55:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:55:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:55:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:55:43] 
[2025-11-25 20:55:43] 2025-11-26 01:54:58,029 | INFO     | ***************************************
[2025-11-25 20:55:43] 2025-11-26 01:54:58,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 20:55:43] 2025-11-26 01:54:58,559 | INFO     | sufficient remaining disk space (124527837184 B)
[2025-11-25 20:55:43] 2025-11-26 01:54:58,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:55:43] 2025-11-26 01:54:58,560 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:55:43] 2025-11-26 01:54:58,560 | INFO     | update_server=False
[2025-11-25 20:55:43] 2025-11-26 01:54:58,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:55:43] 2025-11-26 01:54:58,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:55:43] 2025-11-26 01:54:58,585 | INFO     | all data control threads have been joined
[2025-11-25 20:55:43] 2025-11-26 01:54:59,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:55:43] 2025-11-26 01:54:59,133 | INFO     | aborting loop
[2025-11-25 20:55:43] 2025-11-26 01:54:59,185 | INFO     | all payload control threads have been joined
[2025-11-25 20:55:43] 2025-11-26 01:54:59,481 | INFO     | all job control threads have been joined
[2025-11-25 20:55:43] 2025-11-26 01:54:59,565 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:54:59,590 | INFO     | [data] control thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:54:59,733 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:54:59,734 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:54:59,973 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:54:59,985 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:55:43] 2025-11-26 01:55:00,147 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,168 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,206 | INFO     | [job] validate thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,210 | INFO     | [payload] control thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,490 | INFO     | [job] control thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,567 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:00,772 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:01,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:55:43] 2025-11-26 01:55:02,028 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:04,025 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:55:43] 2025-11-26 01:55:28,033 | INFO     | PID=2410371 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 20:55:43] 2025-11-26 01:55:28,033 | INFO     | .. there are 17 such processes running
[2025-11-25 20:55:43] 2025-11-26 01:55:28,034 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:55:43] 2025-11-26 01:55:28,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:55:43] 2025-11-26 01:55:28,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:55:43] 2025-11-26 01:55:31,281 [wrapper] supervise_pilot (15 min periods counter: 34)
[2025-11-25 20:55:43] 2025-11-26 01:55:35,747 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:55:43] 2025-11-26 01:55:37,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988435797824)>', '<ExcThread(monitor, started 139987790055168)>']
[2025-11-25 20:55:43] 2025-11-26 01:55:38,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:55:43] 2025-11-26 01:55:38,108 | INFO     | [monitor] control thread has ended
[2025-11-25 20:55:43] 2025-11-26 01:55:42,435 | INFO     | all workflow threads have been joined
[2025-11-25 20:55:43] 2025-11-26 01:55:42,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:55:43] 2025-11-26 01:55:42,435 | INFO     | traces error code: 0
[2025-11-25 20:55:43] 2025-11-26 01:55:42,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:55:43] 2025-11-26 01:55:43,218 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:55:43] 2025-11-26 01:55:43,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:55:43] 2025-11-26 01:55:43,222 [wrapper] pilotpid: 2410371
[2025-11-25 20:55:43] 2025-11-26 01:55:43,224 [wrapper] Pilot exit status: 0
[2025-11-25 20:55:43] 2025-11-26 01:55:43,235 [wrapper] pandaids: 6894053155
[2025-11-25 20:55:43] 2025-11-26 01:55:43,315 [wrapper] cleanup supervisor_pilot 3332425 2410372
[2025-11-25 20:55:43] 2025-11-26 01:55:43,328 [wrapper] Test setup, not cleaning
[2025-11-25 20:55:43] 2025-11-26 01:55:43,348 [wrapper] apfmon messages muted
[2025-11-25 20:55:43] 2025-11-26 01:55:43,388 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:55:43] 2025-11-26 01:55:43,401 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:55:43]  *** Error codes and diagnostics ***
[2025-11-25 20:55:43]     "exeErrorCode": 0,
[2025-11-25 20:55:43]     "exeErrorDiag": "",
[2025-11-25 20:55:43]     "pilotErrorCode": 0,
[2025-11-25 20:55:43]     "pilotErrorDiag": "",
[2025-11-25 20:55:43]  *** Listing of results directory ***
[2025-11-25 20:55:43] total 607416
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 16:23 pilot3.tar.gz
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 16:29 queuedata.json
[2025-11-25 20:55:43] -rwx------. 1 boincer umatlas     36292 Nov 23 16:31 runpilot2-wrapper.sh
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:55:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:39 run_atlas
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:39 job.xml
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas 308463861 Nov 25 12:39 EVNT.47523616._000005.pool.root.1
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:39 start_atlas.sh
[2025-11-25 20:55:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:39 shared
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas    589948 Nov 25 12:39 input.tar.gz
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:39 boinc_lockfile
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas      2609 Nov 25 12:39 pandaJob.out
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas        57 Nov 25 12:39 setup.sh.local
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas    991543 Nov 25 12:40 agis_schedconf.cvmfs.json
[2025-11-25 20:55:43] drwx------. 5 boincer umatlas      4096 Nov 25 12:40 pilot3
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas      6880 Nov 25 20:46 init_data.xml
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas 300860230 Nov 25 20:53 HITS.47523618._000101.pool.root.1
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas       531 Nov 25 20:53 boinc_task_state.xml
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas      1047 Nov 25 20:54 memory_monitor_summary.json
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:54 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas    644332 Nov 25 20:54 log.47523618._000101.job.log.tgz.1
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas        95 Nov 25 20:54 pilot_heartbeat.json
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas      7821 Nov 25 20:54 heartbeat.json
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas      4825 Nov 25 20:55 pilotlog.txt
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas        28 Nov 25 20:55 wrapper_checkpoint.txt
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 20:55 boinc_mmap_file
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas   3728911 Nov 25 20:55 log.47523618._000101.job.log.1
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas       357 Nov 25 20:55 output.list
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:55 runtime_log
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas   4392960 Nov 25 20:55 result.tar.gz
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas       660 Nov 25 20:55 YOGMDmqqWh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDCLKDmJiQyyn.diag
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas      9353 Nov 25 20:55 runtime_log.err
[2025-11-25 20:55:43] -rw-r--r--. 1 boincer umatlas     21305 Nov 25 20:55 stderr.txt
[2025-11-25 20:55:43] HITS file was successfully produced:
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas 300860230 Nov 25 20:53 shared/HITS.pool.root.1
[2025-11-25 20:55:43]  *** Contents of shared directory: ***
[2025-11-25 20:55:43] total 599944
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas 308463861 Nov 25 12:39 ATLAS.root_0
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:39 start_atlas.sh
[2025-11-25 20:55:43] -rw-r--r--. 2 boincer umatlas    589948 Nov 25 12:39 input.tar.gz
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas 300860230 Nov 25 20:53 HITS.pool.root.1
[2025-11-25 20:55:43] -rw-------. 1 boincer umatlas   4392960 Nov 25 20:55 result.tar.gz
20:55:44 (2405212): run_atlas exited; CPU time 89744.906037
20:55:44 (2405212): called boinc_finish(0)

</stderr_txt>
]]>

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