Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:10:35 (2600568): wrapper (7.7.26015): starting
16:10:35 (2600568): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 16:10:35] Arguments: --nthreads 8
[2025-11-25 16:10:35] Threads: 8
[2025-11-25 16:10:35] Checking for CVMFS
[2025-11-25 16:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:10:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:10:37] 2.13.2.0 12166 34924 291684 153297 2 397 31483407 40960001 22387 16776704 0 63934893 99.727 38938535 33755 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 16:10:37] CVMFS is ok
[2025-11-25 16:10:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:10:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:10:37] Further information can be found at the LHC@home message board.
[2025-11-25 16:10:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:10:37] Checking for apptainer binary...
[2025-11-25 16:10:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:10:37] Running /usr/bin/apptainer --version
[2025-11-25 16:10:37] apptainer version 1.4.4-1.el9
[2025-11-25 16:10:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:10:38] c-211-33-1.aglt2.org
[2025-11-25 16:10:38] apptainer works
[2025-11-25 16:10:38] Set ATHENA_PROC_NUMBER=8
[2025-11-25 16:10:38] Set ATHENA_CORE_NUMBER=8
[2025-11-25 16:10:38] Starting ATLAS job with PandaID=6896218906
[2025-11-25 16:10:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:58:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:58:30] 2025-11-26 13:49:12,660 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:58:30] 2025-11-26 13:49:12,662 | INFO     | sum of square deviations: 290166605068.54926
[2025-11-26 08:58:30] 2025-11-26 13:49:12,693 | INFO     | sum of deviations: 1717244785309.298
[2025-11-26 08:58:30] 2025-11-26 13:49:12,693 | INFO     | mean x: 1764135083.0214725
[2025-11-26 08:58:30] 2025-11-26 13:49:12,693 | INFO     | mean y: 2988821.1288343556
[2025-11-26 08:58:30] 2025-11-26 13:49:12,693 | INFO     | intersect: -10437398594.177378
[2025-11-26 08:58:30] 2025-11-26 13:49:12,695 | INFO     | chi2: 10.330130274355014
[2025-11-26 08:58:30] 2025-11-26 13:49:12,696 | INFO     | sum of square deviations: 285741993571.028
[2025-11-26 08:58:30] 2025-11-26 13:49:12,771 | INFO     | sum of deviations: 2063217965039.369
[2025-11-26 08:58:30] 2025-11-26 13:49:12,771 | INFO     | mean x: 1764134930.5477903
[2025-11-26 08:58:30] 2025-11-26 13:49:12,772 | INFO     | mean y: 3000741.3576567317
[2025-11-26 08:58:30] 2025-11-26 13:49:12,772 | INFO     | intersect: -12735046039.83736
[2025-11-26 08:58:30] 2025-11-26 13:49:12,773 | INFO     | chi2: 7.026176254170748
[2025-11-26 08:58:30] 2025-11-26 13:49:12,773 | INFO     | current chi2=7.026176254170748 (change=31.983662668673908 %)
[2025-11-26 08:58:30] 2025-11-26 13:49:12,775 | INFO     | sum of square deviations: 281362342612.3624
[2025-11-26 08:58:30] 2025-11-26 13:49:12,911 | INFO     | sum of deviations: 2337852183604.777
[2025-11-26 08:58:30] 2025-11-26 13:49:12,912 | INFO     | mean x: 1764134778.0692148
[2025-11-26 08:58:30] 2025-11-26 13:49:12,912 | INFO     | mean y: 3010294.9287190083
[2025-11-26 08:58:30] 2025-11-26 13:49:12,912 | INFO     | intersect: -14655263818.051426
[2025-11-26 08:58:30] 2025-11-26 13:49:12,913 | INFO     | chi2: 4.75011949597073
[2025-11-26 08:58:30] 2025-11-26 13:49:12,914 | INFO     | current chi2=4.75011949597073 (change=32.39396046816997 %)
[2025-11-26 08:58:30] 2025-11-26 13:49:12,915 | INFO     | sum of square deviations: 277027479443.50946
[2025-11-26 08:58:30] 2025-11-26 13:49:12,982 | INFO     | sum of deviations: 2520397630421.238
[2025-11-26 08:58:30] 2025-11-26 13:49:12,995 | INFO     | mean x: 1764134625.5867083
[2025-11-26 08:58:30] 2025-11-26 13:49:12,995 | INFO     | mean y: 3016716.1588785048
[2025-11-26 08:58:30] 2025-11-26 13:49:12,995 | INFO     | intersect: -16047090439.292017
[2025-11-26 08:58:30] 2025-11-26 13:49:12,996 | INFO     | chi2: 3.697933721542876
[2025-11-26 08:58:30] 2025-11-26 13:49:12,997 | INFO     | current chi2=3.697933721542876 (change=22.15072221489094 %)
[2025-11-26 08:58:30] 2025-11-26 13:49:12,997 | INFO     | right removable region: 962
[2025-11-26 08:58:30] 2025-11-26 13:49:12,998 | INFO     | sum of square deviations: 285737625650.42773
[2025-11-26 08:58:30] 2025-11-26 13:49:13,030 | INFO     | sum of deviations: 1386383593480.7761
[2025-11-26 08:58:30] 2025-11-26 13:49:13,030 | INFO     | mean x: 1764135235.5704007
[2025-11-26 08:58:30] 2025-11-26 13:49:13,030 | INFO     | mean y: 3000210.3463514904
[2025-11-26 08:58:30] 2025-11-26 13:49:13,035 | INFO     | intersect: -8556489082.352915
[2025-11-26 08:58:30] 2025-11-26 13:49:13,036 | INFO     | chi2: 7.604863498982955
[2025-11-26 08:58:30] 2025-11-26 13:49:13,036 | INFO     | current chi2=7.604863498982955 (change=26.381727074029733 %)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,038 | INFO     | sum of square deviations: 281354436485.17285
[2025-11-26 08:58:30] 2025-11-26 13:49:13,111 | INFO     | sum of deviations: 1276539348504.3643
[2025-11-26 08:58:30] 2025-11-26 13:49:13,112 | INFO     | mean x: 1764135388.1105373
[2025-11-26 08:58:30] 2025-11-26 13:49:13,112 | INFO     | mean y: 3004028.4545454546
[2025-11-26 08:58:30] 2025-11-26 13:49:13,112 | INFO     | intersect: -8001093106.622253
[2025-11-26 08:58:30] 2025-11-26 13:49:13,118 | INFO     | chi2: 7.316246276446424
[2025-11-26 08:58:30] 2025-11-26 13:49:13,118 | INFO     | current chi2=7.316246276446424 (change=3.7951663770839583 %)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,118 | INFO     | left removable region: 20
[2025-11-26 08:58:30] 2025-11-26 13:49:13,119 | INFO     | sum of square deviations: 259297529213.86136
[2025-11-26 08:58:30] 2025-11-26 13:49:13,175 | INFO     | sum of deviations: 1999999583241.714
[2025-11-26 08:58:30] 2025-11-26 13:49:13,175 | INFO     | mean x: 1764135205.1847134
[2025-11-26 08:58:30] 2025-11-26 13:49:13,175 | INFO     | mean y: 3037035.1050955416
[2025-11-26 08:58:30] 2025-11-26 13:49:13,175 | INFO     | intersect: -13603994570.049324
[2025-11-26 08:58:30] 2025-11-26 13:49:13,178 | INFO     | chi2: 0.5155013735481563
[2025-11-26 08:58:30] 2025-11-26 13:49:13,178 | INFO     | current memory leak: 7.71 B/s (using 942 data points, chi2=0.52)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | could have reported an average CPU frequency of 2589 MHz (36 samples)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | ..............................
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | . Timing measurements:
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | . get job = 0 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | . initial setup = 4 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,179 | INFO     | . payload setup = 48 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,180 | INFO     | . stage-in = 0 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,180 | INFO     | . payload execution = 59675 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,180 | INFO     | . stage-out = 5 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,180 | INFO     | . log creation = 1 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,180 | INFO     | ..............................
[2025-11-26 08:58:30] 2025-11-26 13:49:13,618 | INFO     | 
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | job summary report
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | --------------------------------------------------
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | PanDA job id: 6896218906
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | task id: 47556149
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | errors: (none)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | pilot state: finished 
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | transexitcode: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | exeerrorcode: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:13,619 | INFO     | exeerrordiag: 
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | exitcode: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | exitmsg: OK
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | cpuconsumptiontime: 269441 s
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | nevents: 1000
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | neventsw: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | pid: 2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | pgrp: 2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | corecount: 8
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | event service: False
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | sizes: {0: 2284088, 1: 2284172, 2: 2284172, 3: 2284172, 4: 2284371, 15: 2284399, 26: 2284555, 37: 2284583, 41: 2284873, 49: 2284901, 59727: 2337657, 59733: 2346707
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | --------------------------------------------------
[2025-11-26 08:58:30] 2025-11-26 13:49:13,620 | INFO     | 
[2025-11-26 08:58:30] 2025-11-26 13:49:13,621 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:58:30] 2025-11-26 13:49:13,670 | INFO     | job 6896218906 has completed (purged errors)
[2025-11-26 08:58:30] 2025-11-26 13:49:13,670 | INFO     | overall cleanup function is called
[2025-11-26 08:58:30] 2025-11-26 13:49:13,996 | INFO     | PID=2605607 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:58:30] 2025-11-26 13:49:13,996 | INFO     | .. there are 21 such processes running
[2025-11-26 08:58:30] 2025-11-26 13:49:14,712 | INFO     | --- collectZombieJob: --- 10, [2612515]
[2025-11-26 08:58:30] 2025-11-26 13:49:14,712 | INFO     | zombie collector waiting for pid 2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:14,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:58:30] 2025-11-26 13:49:14,712 | INFO     | collected zombie processes
[2025-11-26 08:58:30] 2025-11-26 13:49:14,712 | INFO     | will attempt to kill all subprocesses of pid=2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:15,187 | INFO     | process IDs to be killed: [2612515] (in reverse order)
[2025-11-26 08:58:30] 2025-11-26 13:49:15,459 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:58:30] 2025-11-26 13:49:15,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:58:30] 2025-11-26 13:49:15,480 | INFO     | did not find any defunct processes belonging to 2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:15,497 | INFO     | did not find any defunct processes belonging to 2612515
[2025-11-26 08:58:30] 2025-11-26 13:49:15,498 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:58:30] 2025-11-26 13:49:15,499 | INFO     | ready for new job
[2025-11-26 08:58:30] 2025-11-26 13:49:15,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:58:30] 2025-11-26 13:49:15,504 | INFO     | ***************************************
[2025-11-26 08:58:30] 2025-11-26 13:49:15,505 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:58:30] 2025-11-26 13:49:15,505 | INFO     | ***************************************
[2025-11-26 08:58:30] 2025-11-26 13:49:15,505 | INFO     | 
[2025-11-26 08:58:30] 2025-11-26 13:49:15,511 | INFO     | architecture information:
[2025-11-26 08:58:30] 2025-11-26 13:49:15,512 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:58:30] 2025-11-26 13:49:15,534 | INFO     | cat /etc/os-release:
[2025-11-26 08:58:30] NAME="CentOS Linux"
[2025-11-26 08:58:30] VERSION="7 (Core)"
[2025-11-26 08:58:30] ID="centos"
[2025-11-26 08:58:30] ID_LIKE="rhel fedora"
[2025-11-26 08:58:30] VERSION_ID="7"
[2025-11-26 08:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:58:30] ANSI_COLOR="0;31"
[2025-11-26 08:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:58:30] HOME_URL="https://www.centos.org/"
[2025-11-26 08:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:58:30] 
[2025-11-26 08:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:58:30] 
[2025-11-26 08:58:30] 2025-11-26 13:49:15,535 | INFO     | ***************************************
[2025-11-26 08:58:30] 2025-11-26 13:49:16,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 08:58:30] 2025-11-26 13:49:16,171 | INFO     | sufficient remaining disk space (116169637888 B)
[2025-11-26 08:58:30] 2025-11-26 13:49:16,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:58:30] 2025-11-26 13:49:16,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:58:30] 2025-11-26 13:49:16,172 | INFO     | update_server=False
[2025-11-26 08:58:30] 2025-11-26 13:49:16,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:58:30] 2025-11-26 13:49:16,288 | INFO     | all data control threads have been joined
[2025-11-26 08:58:30] 2025-11-26 13:49:16,698 | INFO     | all payload control threads have been joined
[2025-11-26 08:58:30] 2025-11-26 13:49:16,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:58:30] 2025-11-26 13:49:17,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:58:30] 2025-11-26 13:49:17,170 | INFO     | aborting loop
[2025-11-26 08:58:30] 2025-11-26 13:49:17,180 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,227 | INFO     | all job control threads have been joined
[2025-11-26 08:58:30] 2025-11-26 13:49:17,294 | INFO     | [data] control thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,383 | INFO     | [job] validate thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,654 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,704 | INFO     | [payload] control thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,738 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:17,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:58:30] 2025-11-26 13:49:17,932 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,073 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,171 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,176 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,233 | INFO     | [job] control thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,249 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:58:30] 2025-11-26 13:49:18,870 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:19,640 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:21,844 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:58:30] 2025-11-26 13:49:34,120 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:58:30] 2025-11-26 13:49:34,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826476021568)>', '<ExcThread(monitor, started 139826133194496)>']
[2025-11-26 08:58:30] 2025-11-26 13:49:39,929 | INFO     | all workflow threads have been joined
[2025-11-26 08:58:30] 2025-11-26 13:49:39,929 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:58:30] 2025-11-26 13:49:39,929 | INFO     | traces error code: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:39,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:58:30] 2025-11-26 13:49:46,948 | INFO     | PID=2605607 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:58:30] 2025-11-26 13:49:46,948 | INFO     | .. there are 21 such processes running
[2025-11-26 08:58:30] 2025-11-26 13:49:46,949 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:58:30] 2025-11-26 13:49:46,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:58:30] 2025-11-26 13:49:46,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:58:30] 2025-11-26 13:49:46,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:58:30] 2025-11-26 13:49:46,950 | INFO     | [monitor] control thread has ended
[2025-11-26 08:58:30] 2025-11-26 13:49:47,122 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:58:30] 2025-11-26 13:49:47,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:58:30] 2025-11-26 13:49:47,127 [wrapper] pilotpid: 2605607
[2025-11-26 08:58:30] 2025-11-26 13:49:47,129 [wrapper] Pilot exit status: 0
[2025-11-26 08:58:30] 2025-11-26 13:49:47,168 [wrapper] pandaids: 6896218906
[2025-11-26 08:58:30] 2025-11-26 13:49:47,466 [wrapper] cleanup supervisor_pilot  356946 2605608
[2025-11-26 08:58:30] 2025-11-26 13:49:47,471 [wrapper] Test setup, not cleaning
[2025-11-26 08:58:30] 2025-11-26 13:49:47,475 [wrapper] apfmon messages muted
[2025-11-26 08:58:30] 2025-11-26 13:49:47,494 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:58:30] 2025-11-26 13:49:47,510 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:58:30]  *** Error codes and diagnostics ***
[2025-11-26 08:58:30]     "exeErrorCode": 0,
[2025-11-26 08:58:30]     "exeErrorDiag": "",
[2025-11-26 08:58:30]     "pilotErrorCode": 0,
[2025-11-26 08:58:30]     "pilotErrorDiag": "",
[2025-11-26 08:58:30]  *** Listing of results directory ***
[2025-11-26 08:58:30] total 1326520
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:37 queuedata.json
[2025-11-26 08:58:30] -rwx------. 1 boincer umatlas     36292 Nov 24 14:39 runpilot2-wrapper.sh
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas       100 Nov 25 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:58:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 16:10 run_atlas
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas       105 Nov 25 16:10 job.xml
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas 410989595 Nov 25 16:10 EVNT.47483658._001407.pool.root.1
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:10 start_atlas.sh
[2025-11-26 08:58:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 16:10 shared
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 16:10 input.tar.gz
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas         0 Nov 25 16:10 boinc_lockfile
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 16:10 pandaJob.out
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas        57 Nov 25 16:10 setup.sh.local
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas    991893 Nov 25 16:11 agis_schedconf.cvmfs.json
[2025-11-26 08:58:30] drwx------. 5 boincer umatlas      4096 Nov 25 16:11 pilot3
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:26 boinc_task_state.xml
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas      6881 Nov 26 08:45 init_data.xml
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas 923968608 Nov 26 08:47 HITS.47556149._003936.pool.root.1
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas      1060 Nov 26 08:48 memory_monitor_summary.json
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas   2119674 Nov 26 08:48 log.47556149._003936.job.log.tgz.1
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas      8625 Nov 26 08:49 heartbeat.json
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas        95 Nov 26 08:49 pilot_heartbeat.json
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas       823 Nov 26 08:49 pilotlog.txt
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas   7615223 Nov 26 08:49 log.47556149._003936.job.log.1
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas       353 Nov 26 08:49 output.list
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:49 runtime_log
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas   9758720 Nov 26 08:49 result.tar.gz
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 08:49 runtime_log.err
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas       662 Nov 26 08:49 JXiKDmuarh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHBJKDm1i1i6m.diag
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:58 wrapper_checkpoint.txt
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:58 boinc_mmap_file
[2025-11-26 08:58:30] -rw-r--r--. 1 boincer umatlas     21293 Nov 26 08:58 stderr.txt
[2025-11-26 08:58:30] HITS file was successfully produced:
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas 923968608 Nov 26 08:47 shared/HITS.pool.root.1
[2025-11-26 08:58:30]  *** Contents of shared directory: ***
[2025-11-26 08:58:30] total 1313812
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas 410989595 Nov 25 16:10 ATLAS.root_0
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:10 start_atlas.sh
[2025-11-26 08:58:30] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 16:10 input.tar.gz
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas 923968608 Nov 26 08:47 HITS.pool.root.1
[2025-11-26 08:58:30] -rw-------. 1 boincer umatlas   9758720 Nov 26 08:49 result.tar.gz
08:58:32 (2600568): run_atlas exited; CPU time 271185.828042
08:58:32 (2600568): called boinc_finish(0)

</stderr_txt>
]]>

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