Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:53:20 (1011): wrapper (7.7.26015): starting
12:53:20 (1011): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:53:20] Arguments: --nthreads 12
[2025-11-25 12:53:20] Threads: 12
[2025-11-25 12:53:20] Checking for CVMFS
[2025-11-25 12:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:53:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:53:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:53:20] 2.11.2.0 2987 286520 95700 153292 2 80 16438191 20275200 1 130560 1 128634682 99.967 17018069 14063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:53:20] CVMFS is ok
[2025-11-25 12:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:53:20] Further information can be found at the LHC@home message board.
[2025-11-25 12:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:53:20] Checking for apptainer binary...
[2025-11-25 12:53:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:53:20] Running /usr/bin/apptainer --version
[2025-11-25 12:53:20] apptainer version 1.3.2-1.el7
[2025-11-25 12:53:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:53:21] c-205-19.aglt2.org
[2025-11-25 12:53:21] apptainer works
[2025-11-25 12:53:21] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:53:21] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:53:21] Starting ATLAS job with PandaID=6896201962
[2025-11-25 12:53:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:00:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:00:24] 2025-11-26 00:59:35,773 | INFO     | monitor loop #1911: job 0:6896201962 is in state 'finished'
[2025-11-25 20:00:24] 2025-11-26 00:59:35,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,190 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 20:00:24] 2025-11-26 00:59:36,194 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 20:00:24] 2025-11-26 00:59:36,197 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896201962/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,197 | INFO     | extracted standard info from prmon json
[2025-11-25 20:00:24] 2025-11-26 00:59:36,197 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:00:24] 2025-11-26 00:59:36,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:00:24] 2025-11-26 00:59:36,204 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:00:24] 2025-11-26 00:59:36,205 | INFO     | sum of square deviations: 22809655520.849644
[2025-11-25 20:00:24] 2025-11-26 00:59:36,208 | INFO     | sum of deviations: 357940868871.0838
[2025-11-25 20:00:24] 2025-11-26 00:59:36,209 | INFO     | mean x: 1764105994.183771
[2025-11-25 20:00:24] 2025-11-26 00:59:36,209 | INFO     | mean y: 3420242.4534606207
[2025-11-25 20:00:24] 2025-11-26 00:59:36,209 | INFO     | intersect: -27679840110.235332
[2025-11-25 20:00:24] 2025-11-26 00:59:36,209 | INFO     | chi2: 6.097271368963205
[2025-11-25 20:00:24] 2025-11-26 00:59:36,210 | INFO     | sum of square deviations: 22002808063.178802
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | sum of deviations: 529726681180.0967
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | mean x: 1764105841.6859903
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | mean y: 3452682.1545893718
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | intersect: -42468123222.31349
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | chi2: 2.67573747060662
[2025-11-25 20:00:24] 2025-11-26 00:59:36,214 | INFO     | current chi2=2.67573747060662 (change=56.11582118147369 %)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,215 | INFO     | sum of square deviations: 21215191769.877888
[2025-11-25 20:00:24] 2025-11-26 00:59:36,219 | INFO     | sum of deviations: 560109524331.8829
[2025-11-25 20:00:24] 2025-11-26 00:59:36,219 | INFO     | mean x: 1764105689.1858191
[2025-11-25 20:00:24] 2025-11-26 00:59:36,219 | INFO     | mean y: 3458515.738386308
[2025-11-25 20:00:24] 2025-11-26 00:59:36,219 | INFO     | intersect: -46571298345.23742
[2025-11-25 20:00:24] 2025-11-26 00:59:36,219 | INFO     | chi2: 2.3301054966395722
[2025-11-25 20:00:24] 2025-11-26 00:59:36,220 | INFO     | current chi2=2.3301054966395722 (change=12.917260297912906 %)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,220 | INFO     | right removable region: 408
[2025-11-25 20:00:24] 2025-11-26 00:59:36,220 | INFO     | sum of square deviations: 22002761093.178795
[2025-11-25 20:00:24] 2025-11-26 00:59:36,224 | INFO     | sum of deviations: 229818164477.9904
[2025-11-25 20:00:24] 2025-11-26 00:59:36,224 | INFO     | mean x: 1764106146.6859903
[2025-11-25 20:00:24] 2025-11-26 00:59:36,224 | INFO     | mean y: 3444368.084541063
[2025-11-25 20:00:24] 2025-11-26 00:59:36,224 | INFO     | intersect: -18422590203.613033
[2025-11-25 20:00:24] 2025-11-26 00:59:36,225 | INFO     | chi2: 3.9297770807237615
[2025-11-25 20:00:24] 2025-11-26 00:59:36,225 | INFO     | current chi2=3.9297770807237615 (change=35.54859472505337 %)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,225 | INFO     | sum of square deviations: 21215122840.503723
[2025-11-25 20:00:24] 2025-11-26 00:59:36,229 | INFO     | sum of deviations: 199419012917.56992
[2025-11-25 20:00:24] 2025-11-26 00:59:36,229 | INFO     | mean x: 1764106299.1882641
[2025-11-25 20:00:24] 2025-11-26 00:59:36,229 | INFO     | mean y: 3450246.577017115
[2025-11-25 20:00:24] 2025-11-26 00:59:36,229 | INFO     | intersect: -16578887716.328598
[2025-11-25 20:00:24] 2025-11-26 00:59:36,230 | INFO     | chi2: 3.8860905569158257
[2025-11-25 20:00:24] 2025-11-26 00:59:36,230 | INFO     | current chi2=3.8860905569158257 (change=1.111679439076221 %)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,230 | INFO     | left removable region: 20
[2025-11-25 20:00:24] 2025-11-26 00:59:36,230 | INFO     | sum of square deviations: 18112199176.886528
[2025-11-25 20:00:24] 2025-11-26 00:59:36,234 | INFO     | sum of deviations: 360624670178.07196
[2025-11-25 20:00:24] 2025-11-26 00:59:36,234 | INFO     | mean x: 1764106268.6907218
[2025-11-25 20:00:24] 2025-11-26 00:59:36,234 | INFO     | mean y: 3497777.9922680412
[2025-11-25 20:00:24] 2025-11-26 00:59:36,234 | INFO     | intersect: -35120908435.33536
[2025-11-25 20:00:24] 2025-11-26 00:59:36,235 | INFO     | chi2: 0.06197265561030715
[2025-11-25 20:00:24] 2025-11-26 00:59:36,235 | INFO     | current memory leak: 19.91 B/s (using 388 data points, chi2=0.06)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,235 | INFO     | could have reported an average CPU frequency of 2364 MHz (18 samples)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,235 | INFO     | ..............................
[2025-11-25 20:00:24] 2025-11-26 00:59:36,235 | INFO     | . Timing measurements:
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . get job = 0 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . initial setup = 2 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . payload setup = 7 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . stage-in = 0 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . payload execution = 25522 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . stage-out = 3 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | . log creation = 0 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,236 | INFO     | ..............................
[2025-11-25 20:00:24] 2025-11-26 00:59:36,316 | INFO     | 
[2025-11-25 20:00:24] 2025-11-26 00:59:36,316 | INFO     | job summary report
[2025-11-25 20:00:24] 2025-11-26 00:59:36,316 | INFO     | --------------------------------------------------
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | PanDA job id: 6896201962
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | task id: 47556173
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | errors: (none)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | pilot state: finished 
[2025-11-25 20:00:24] 2025-11-26 00:59:36,317 | INFO     | transexitcode: 0
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | exeerrorcode: 0
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | exeerrordiag: 
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | exitcode: 0
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | exitmsg: OK
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | cpuconsumptiontime: 293764 s
[2025-11-25 20:00:24] 2025-11-26 00:59:36,318 | INFO     | nevents: 1000
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | neventsw: 0
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | pid: 11240
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | pgrp: 11240
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | corecount: 12
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | event service: False
[2025-11-25 20:00:24] 2025-11-26 00:59:36,319 | INFO     | sizes: {0: 2284142, 1: 2284341, 5: 2284603, 11: 2284659, 25533: 2321811, 25537: 2330805, 25538: 2330989, 25543: 2331235}
[2025-11-25 20:00:24] 2025-11-26 00:59:36,320 | INFO     | --------------------------------------------------
[2025-11-25 20:00:24] 2025-11-26 00:59:36,320 | INFO     | 
[2025-11-25 20:00:24] 2025-11-26 00:59:36,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:00:24] 2025-11-26 00:59:36,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,348 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:00:24] 2025-11-26 00:59:36,348 | INFO     | job 6896201962 has completed (purged errors)
[2025-11-25 20:00:24] 2025-11-26 00:59:36,349 | INFO     | overall cleanup function is called
[2025-11-25 20:00:24] 2025-11-26 00:59:37,366 | INFO     | --- collectZombieJob: --- 10, [11240]
[2025-11-25 20:00:24] 2025-11-26 00:59:37,366 | INFO     | zombie collector waiting for pid 11240
[2025-11-25 20:00:24] 2025-11-26 00:59:37,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:00:24] 2025-11-26 00:59:37,367 | INFO     | collected zombie processes
[2025-11-25 20:00:24] 2025-11-26 00:59:37,367 | INFO     | will attempt to kill all subprocesses of pid=11240
[2025-11-25 20:00:24] 2025-11-26 00:59:37,462 | INFO     | process IDs to be killed: [11240] (in reverse order)
[2025-11-25 20:00:24] 2025-11-26 00:59:37,515 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:00:24] 2025-11-26 00:59:37,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:00:24] 2025-11-26 00:59:37,519 | INFO     | did not find any defunct processes belonging to 11240
[2025-11-25 20:00:24] 2025-11-26 00:59:37,522 | INFO     | did not find any defunct processes belonging to 11240
[2025-11-25 20:00:24] 2025-11-26 00:59:37,525 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:00:24] 2025-11-26 00:59:37,525 | INFO     | ready for new job
[2025-11-25 20:00:24] 2025-11-26 00:59:37,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:00:24] 2025-11-26 00:59:37,528 | INFO     | ***************************************
[2025-11-25 20:00:24] 2025-11-26 00:59:37,528 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:00:24] 2025-11-26 00:59:37,528 | INFO     | ***************************************
[2025-11-25 20:00:24] 2025-11-26 00:59:37,529 | INFO     | 
[2025-11-25 20:00:24] 2025-11-26 00:59:37,529 | INFO     | architecture information:
[2025-11-25 20:00:24] 2025-11-26 00:59:37,530 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:00:24] 2025-11-26 00:59:37,544 | INFO     | cat /etc/os-release:
[2025-11-25 20:00:24] NAME="CentOS Linux"
[2025-11-25 20:00:24] VERSION="7 (Core)"
[2025-11-25 20:00:24] ID="centos"
[2025-11-25 20:00:24] ID_LIKE="rhel fedora"
[2025-11-25 20:00:24] VERSION_ID="7"
[2025-11-25 20:00:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:00:24] ANSI_COLOR="0;31"
[2025-11-25 20:00:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:00:24] HOME_URL="https://www.centos.org/"
[2025-11-25 20:00:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:00:24] 
[2025-11-25 20:00:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:00:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:00:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:00:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:00:24] 
[2025-11-25 20:00:24] 2025-11-26 00:59:37,545 | INFO     | ***************************************
[2025-11-25 20:00:24] 2025-11-26 00:59:38,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:00:24] 2025-11-26 00:59:38,064 | INFO     | sufficient remaining disk space (28257026048 B)
[2025-11-25 20:00:24] 2025-11-26 00:59:38,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:00:24] 2025-11-26 00:59:38,065 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:00:24] 2025-11-26 00:59:38,065 | INFO     | update_server=False
[2025-11-25 20:00:24] 2025-11-26 00:59:38,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:00:24] 2025-11-26 00:59:38,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:00:24] 2025-11-26 00:59:38,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:00:24] 2025-11-26 00:59:38,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:00:24] 2025-11-26 00:59:38,141 | INFO     | all job control threads have been joined
[2025-11-25 20:00:24] 2025-11-26 00:59:38,276 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 20:00:24] 2025-11-26 00:59:38,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 20:00:24] 2025-11-26 00:59:38,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:00:24] 2025-11-26 00:59:38,288 | INFO     | will abort loop
[2025-11-25 20:00:24] 2025-11-26 00:59:38,540 | INFO     | all data control threads have been joined
[2025-11-25 20:00:24] 2025-11-26 00:59:39,067 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,072 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,078 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,147 | INFO     | [job] control thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,294 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,334 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,365 | INFO     | all payload control threads have been joined
[2025-11-25 20:00:24] 2025-11-26 00:59:39,427 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:39,546 | INFO     | [data] control thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,014 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,073 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,370 | INFO     | [payload] control thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,428 | INFO     | [job] validate thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,504 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:40,512 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:00:24] 2025-11-26 00:59:42,068 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:00:24] 2025-11-26 01:00:07,715 | INFO     | PID=4864 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 20:00:24] 2025-11-26 01:00:07,716 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:00:24] 2025-11-26 01:00:07,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:00:24] 2025-11-26 01:00:07,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:00:24] 2025-11-26 01:00:18,254 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:00:24] 2025-11-26 01:00:18,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895343343424)>', '<ExcThread(monitor, started 139894433232640)>']
[2025-11-25 20:00:24] 2025-11-26 01:00:19,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:00:24] 2025-11-26 01:00:19,776 | INFO     | [monitor] control thread has ended
[2025-11-25 20:00:24] 2025-11-26 01:00:23,948 | INFO     | all workflow threads have been joined
[2025-11-25 20:00:24] 2025-11-26 01:00:23,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:00:24] 2025-11-26 01:00:23,949 | INFO     | traces error code: 0
[2025-11-25 20:00:24] 2025-11-26 01:00:23,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:00:24] 2025-11-26 01:00:24,057 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:00:24] 2025-11-26 01:00:24,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:00:24] 2025-11-26 01:00:24,065 [wrapper] pilotpid: 4864
[2025-11-25 20:00:24] 2025-11-26 01:00:24,069 [wrapper] Pilot exit status: 0
[2025-11-25 20:00:24] 2025-11-26 01:00:24,083 [wrapper] pandaids: 6896201962
[2025-11-25 20:00:24] 2025-11-26 01:00:24,129 [wrapper] cleanup supervisor_pilot 13091 4865
[2025-11-25 20:00:24] 2025-11-26 01:00:24,133 [wrapper] Test setup, not cleaning
[2025-11-25 20:00:24] 2025-11-26 01:00:24,137 [wrapper] apfmon messages muted
[2025-11-25 20:00:24] 2025-11-26 01:00:24,141 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:00:24] 2025-11-26 01:00:24,145 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:00:24]  *** Error codes and diagnostics ***
[2025-11-25 20:00:24]     "exeErrorCode": 0,
[2025-11-25 20:00:24]     "exeErrorDiag": "",
[2025-11-25 20:00:24]     "pilotErrorCode": 0,
[2025-11-25 20:00:24]     "pilotErrorDiag": "",
[2025-11-25 20:00:24]  *** Listing of results directory ***
[2025-11-25 20:00:24] total 1304656
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 14:27 queuedata.json
[2025-11-25 20:00:24] -rwx------ 1 boincer umatlas     36292 Nov 24 14:27 runpilot2-wrapper.sh
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas       100 Nov 25 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:00:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 12:53 run_atlas
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas       105 Nov 25 12:53 job.xml
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas 407811585 Nov 25 12:53 EVNT.47483658._003047.pool.root.1
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:53 start_atlas.sh
[2025-11-25 20:00:24] drwxrwx--x 2 boincer umatlas      4096 Nov 25 12:53 shared
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 12:53 input.tar.gz
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas         0 Nov 25 12:53 boinc_lockfile
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 12:53 pandaJob.out
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas        57 Nov 25 12:53 setup.sh.local
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas    991543 Nov 25 12:53 agis_schedconf.cvmfs.json
[2025-11-25 20:00:24] drwx------ 5 boincer umatlas      4096 Nov 25 12:53 pilot3
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas       532 Nov 25 19:50 boinc_task_state.xml
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 19:54 init_data.xml
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas 912736838 Nov 25 19:58 HITS.47556173._000298.pool.root.1
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas      1061 Nov 25 19:59 memory_monitor_summary.json
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas   1516240 Nov 25 19:59 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas   2172354 Nov 25 19:59 log.47556173._000298.job.log.tgz.1
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas      8667 Nov 25 19:59 heartbeat.json
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas        95 Nov 25 20:00 pilot_heartbeat.json
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:00 boinc_mmap_file
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:00 wrapper_checkpoint.txt
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas      4931 Nov 25 20:00 pilotlog.txt
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas   3573337 Nov 25 20:00 log.47556173._000298.job.log.1
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas       353 Nov 25 20:00 output.list
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:00 runtime_log
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas   5765120 Nov 25 20:00 result.tar.gz
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 20:00 runtime_log.err
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas       670 Nov 25 20:00 oRhMDmoOrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbsLKDmSO5Xdn.diag
[2025-11-25 20:00:24] -rw-r--r-- 1 boincer umatlas     21312 Nov 25 20:00 stderr.txt
[2025-11-25 20:00:24] HITS file was successfully produced:
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas 912736838 Nov 25 19:58 shared/HITS.pool.root.1
[2025-11-25 20:00:24]  *** Contents of shared directory: ***
[2025-11-25 20:00:24] total 1295840
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas 407811585 Nov 25 12:53 ATLAS.root_0
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:53 start_atlas.sh
[2025-11-25 20:00:24] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 12:53 input.tar.gz
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas 912736838 Nov 25 19:58 HITS.pool.root.1
[2025-11-25 20:00:24] -rw------- 1 boincer umatlas   5765120 Nov 25 20:00 result.tar.gz
20:00:25 (1011): run_atlas exited; CPU time 287159.098423
20:00:25 (1011): called boinc_finish(0)

</stderr_txt>
]]>

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