Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:17 (22804): wrapper (7.7.26015): starting
21:23:17 (22804): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 21:23:17] Arguments: --nthreads 8
[2025-11-27 21:23:17] Threads: 8
[2025-11-27 21:23:17] Checking for CVMFS
[2025-11-27 21:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:23:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:23:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:23:19] 2.11.2.0 31738 287120 139420 153384 3 84 19211404 25165824 1288 130560 10 123194826 99.872 79755711 2802 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 21:23:19] CVMFS is ok
[2025-11-27 21:23:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:23:19] Checking for apptainer binary...
[2025-11-27 21:23:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:23:19] Running /usr/bin/apptainer --version
[2025-11-27 21:23:19] apptainer version 1.3.2-1.el7
[2025-11-27 21:23:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:23:21] cg-vwn375.simple-grid.lan
[2025-11-27 21:23:21] apptainer works
[2025-11-27 21:23:21] Set ATHENA_PROC_NUMBER=8
[2025-11-27 21:23:21] Set ATHENA_CORE_NUMBER=8
[2025-11-27 21:23:21] Starting ATLAS job with PandaID=6896201975
[2025-11-27 21:23:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 20:06:49]  *** The last 200 lines of the pilot log: ***
[2025-11-28 20:06:49] 2025-11-28 19:05:45,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:06:49] 2025-11-28 19:05:46,642 | INFO     | time since job start (81509s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:48,499 | INFO     | monitor loop #5510: job 0:6896201975 is in state 'finished'
[2025-11-28 20:06:49] 2025-11-28 19:05:48,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:06:49] 2025-11-28 19:05:48,650 | INFO     | time since job start (81511s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:50,664 | INFO     | time since job start (81513s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:51,015 | INFO     | monitor loop #5511: job 0:6896201975 is in state 'finished'
[2025-11-28 20:06:49] 2025-11-28 19:05:51,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:06:49] 2025-11-28 19:05:52,671 | INFO     | time since job start (81515s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:53,520 | INFO     | monitor loop #5512: job 0:6896201975 is in state 'finished'
[2025-11-28 20:06:49] 2025-11-28 19:05:53,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:06:49] 2025-11-28 19:05:54,680 | INFO     | time since job start (81517s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:56,025 | INFO     | monitor loop #5513: job 0:6896201975 is in state 'finished'
[2025-11-28 20:06:49] 2025-11-28 19:05:56,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:06:49] 2025-11-28 19:05:56,689 | INFO     | time since job start (81519s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,245 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 20:06:49] 2025-11-28 19:05:58,248 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 20:06:49] 2025-11-28 19:05:58,250 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6896201975/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,251 | INFO     | extracted standard info from prmon json
[2025-11-28 20:06:49] 2025-11-28 19:05:58,251 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 20:06:49] 2025-11-28 19:05:58,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 20:06:49] 2025-11-28 19:05:58,275 | INFO     | fitting pss+swap vs Time
[2025-11-28 20:06:49] 2025-11-28 19:05:58,277 | INFO     | sum of square deviations: 722952445040.2079
[2025-11-28 20:06:49] 2025-11-28 19:05:58,324 | INFO     | sum of deviations: 2616514141693.3
[2025-11-28 20:06:49] 2025-11-28 19:05:58,324 | INFO     | mean x: 1764316179.5837104
[2025-11-28 20:06:49] 2025-11-28 19:05:58,325 | INFO     | mean y: 2826711.560331825
[2025-11-28 20:06:49] 2025-11-28 19:05:58,325 | INFO     | intersect: -6382597759.951525
[2025-11-28 20:06:49] 2025-11-28 19:05:58,326 | INFO     | chi2: 23.71698798416496
[2025-11-28 20:06:49] 2025-11-28 19:05:58,328 | INFO     | sum of square deviations: 714805502651.8141
[2025-11-28 20:06:49] 2025-11-28 19:05:58,379 | INFO     | sum of deviations: 3059194419937.1006
[2025-11-28 20:06:49] 2025-11-28 19:05:58,379 | INFO     | mean x: 1764316027.0878122
[2025-11-28 20:06:49] 2025-11-28 19:05:58,379 | INFO     | mean y: 2834996.9818319455
[2025-11-28 20:06:49] 2025-11-28 19:05:58,379 | INFO     | intersect: -7548010267.987719
[2025-11-28 20:06:49] 2025-11-28 19:05:58,381 | INFO     | chi2: 20.383148702407155
[2025-11-28 20:06:49] 2025-11-28 19:05:58,381 | INFO     | current chi2=20.383148702407155 (change=14.0567566336151 %)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,381 | INFO     | right removable region: 1320
[2025-11-28 20:06:49] 2025-11-28 19:05:58,383 | INFO     | sum of square deviations: 714804626081.8138
[2025-11-28 20:06:49] 2025-11-28 19:05:58,444 | INFO     | sum of deviations: 2056487356687.4404
[2025-11-28 20:06:49] 2025-11-28 19:05:58,444 | INFO     | mean x: 1764316332.0878122
[2025-11-28 20:06:49] 2025-11-28 19:05:58,444 | INFO     | mean y: 2837193.194549584
[2025-11-28 20:06:49] 2025-11-28 19:05:58,444 | INFO     | intersect: -5073087189.142149
[2025-11-28 20:06:49] 2025-11-28 19:05:58,446 | INFO     | chi2: 18.914719868203036
[2025-11-28 20:06:49] 2025-11-28 19:05:58,446 | INFO     | current chi2=18.914719868203036 (change=20.248220891996223 %)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,446 | INFO     | left removable region: 10
[2025-11-28 20:06:49] 2025-11-28 19:05:58,448 | INFO     | sum of square deviations: 697096428213.1882
[2025-11-28 20:06:49] 2025-11-28 19:05:58,500 | INFO     | sum of deviations: 2135858932103.655
[2025-11-28 20:06:49] 2025-11-28 19:05:58,500 | INFO     | mean x: 1764316301.5969465
[2025-11-28 20:06:49] 2025-11-28 19:05:58,500 | INFO     | mean y: 2856271.76259542
[2025-11-28 20:06:49] 2025-11-28 19:05:58,500 | INFO     | intersect: -5402896188.454403
[2025-11-28 20:06:49] 2025-11-28 19:05:58,502 | INFO     | chi2: 11.525746364377426
[2025-11-28 20:06:49] 2025-11-28 19:05:58,502 | INFO     | current memory leak: 3.06 B/s (using 1310 data points, chi2=11.53)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | ..............................
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . Timing measurements:
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . get job = 0 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . initial setup = 9 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . payload setup = 157 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . stage-in = 0 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,504 | INFO     | . payload execution = 81052 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,505 | INFO     | . stage-out = 5 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,505 | INFO     | . log creation = 1 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,505 | INFO     | ..............................
[2025-11-28 20:06:49] 2025-11-28 19:05:58,610 | INFO     | 
[2025-11-28 20:06:49] 2025-11-28 19:05:58,610 | INFO     | job summary report
[2025-11-28 20:06:49] 2025-11-28 19:05:58,610 | INFO     | --------------------------------------------------
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | PanDA job id: 6896201975
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | task id: 47556173
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | errors: (none)
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | pilot state: finished 
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | transexitcode: 0
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | exeerrorcode: 0
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | exeerrordiag: 
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | exitcode: 0
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | exitmsg: OK
[2025-11-28 20:06:49] 2025-11-28 19:05:58,611 | INFO     | cpuconsumptiontime: 305499 s
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | nevents: 1000
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | neventsw: 0
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | pid: 818
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | pgrp: 818
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | corecount: 8
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | event service: False
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | sizes: {0: 2284080, 1: 2284335, 12: 2284335, 23: 2284363, 33: 2284391, 44: 2284447, 55: 2284603, 66: 2284631, 76: 2284659, 87: 2284715, 98: 2284743, 99: 2285313, 1
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | --------------------------------------------------
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | 
[2025-11-28 20:06:49] 2025-11-28 19:05:58,612 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-28 20:06:49] 2025-11-28 19:05:58,708 | INFO     | time since job start (81521s) is within the limit (172800.0s)
[2025-11-28 20:06:49] 2025-11-28 19:05:59,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 20:06:49] 2025-11-28 19:05:59,098 | INFO     | job 6896201975 has completed (purged errors)
[2025-11-28 20:06:49] 2025-11-28 19:05:59,099 | INFO     | overall cleanup function is called
[2025-11-28 20:06:49] 2025-11-28 19:06:00,118 | INFO     | --- collectZombieJob: --- 10, [818]
[2025-11-28 20:06:49] 2025-11-28 19:06:00,118 | INFO     | zombie collector waiting for pid 818
[2025-11-28 20:06:49] 2025-11-28 19:06:00,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 20:06:49] 2025-11-28 19:06:00,118 | INFO     | collected zombie processes
[2025-11-28 20:06:49] 2025-11-28 19:06:00,118 | INFO     | will attempt to kill all subprocesses of pid=818
[2025-11-28 20:06:49] 2025-11-28 19:06:00,245 | INFO     | process IDs to be killed: [818] (in reverse order)
[2025-11-28 20:06:49] 2025-11-28 19:06:00,943 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 20:06:49] 2025-11-28 19:06:00,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 20:06:49] 2025-11-28 19:06:00,947 | INFO     | did not find any defunct processes belonging to 818
[2025-11-28 20:06:49] 2025-11-28 19:06:00,950 | INFO     | did not find any defunct processes belonging to 818
[2025-11-28 20:06:49] 2025-11-28 19:06:00,995 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 20:06:49] 2025-11-28 19:06:00,995 | INFO     | ready for new job
[2025-11-28 20:06:49] 2025-11-28 19:06:00,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 20:06:49] 2025-11-28 19:06:01,000 | INFO     | ***************************************
[2025-11-28 20:06:49] 2025-11-28 19:06:01,001 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 20:06:49] 2025-11-28 19:06:01,001 | INFO     | ***************************************
[2025-11-28 20:06:49] 2025-11-28 19:06:01,001 | INFO     | 
[2025-11-28 20:06:49] 2025-11-28 19:06:01,002 | INFO     | pilot is running in a VM
[2025-11-28 20:06:49] 2025-11-28 19:06:01,002 | INFO     | architecture information:
[2025-11-28 20:06:49] 2025-11-28 19:06:01,004 | INFO     | executing command: cat /etc/os-release
[2025-11-28 20:06:49] 2025-11-28 19:06:01,248 | INFO     | cat /etc/os-release:
[2025-11-28 20:06:49] NAME="CentOS Linux"
[2025-11-28 20:06:49] VERSION="7 (Core)"
[2025-11-28 20:06:49] ID="centos"
[2025-11-28 20:06:49] ID_LIKE="rhel fedora"
[2025-11-28 20:06:49] VERSION_ID="7"
[2025-11-28 20:06:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 20:06:49] ANSI_COLOR="0;31"
[2025-11-28 20:06:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 20:06:49] HOME_URL="https://www.centos.org/"
[2025-11-28 20:06:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 20:06:49] 
[2025-11-28 20:06:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 20:06:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 20:06:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 20:06:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 20:06:49] 
[2025-11-28 20:06:49] 2025-11-28 19:06:01,249 | INFO     | ***************************************
[2025-11-28 20:06:49] 2025-11-28 19:06:01,752 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-28 20:06:49] 2025-11-28 19:06:02,025 | INFO     | sufficient remaining disk space (489193209856 B)
[2025-11-28 20:06:49] 2025-11-28 19:06:02,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 20:06:49] 2025-11-28 19:06:02,025 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 20:06:49] 2025-11-28 19:06:02,025 | INFO     | update_server=False
[2025-11-28 20:06:49] 2025-11-28 19:06:02,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 20:06:49] 2025-11-28 19:06:02,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:06:49] 2025-11-28 19:06:02,051 | INFO     | aborting loop
[2025-11-28 20:06:49] 2025-11-28 19:06:02,197 | INFO     | all payload control threads have been joined
[2025-11-28 20:06:49] 2025-11-28 19:06:02,831 | INFO     | all data control threads have been joined
[2025-11-28 20:06:49] 2025-11-28 19:06:02,879 | INFO     | all job control threads have been joined
[2025-11-28 20:06:49] 2025-11-28 19:06:03,032 | INFO     | [job] retrieve thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,057 | INFO     | [job] job monitor thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 20:06:49] 2025-11-28 19:06:03,203 | INFO     | [payload] control thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,212 | INFO     | [job] validate thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,417 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:06:49] 2025-11-28 19:06:03,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,820 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,837 | INFO     | [data] control thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:03,885 | INFO     | [job] control thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:04,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 20:06:49] 2025-11-28 19:06:04,244 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:04,435 | INFO     | [data] copytool_in thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:04,435 | INFO     | [payload] failed_post thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:04,532 | INFO     | [payload] validate_post thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:04,633 | INFO     | [job] queue monitor thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:05,120 | INFO     | [data] copytool_out thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:08,050 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 20:06:49] 2025-11-28 19:06:31,923 | INFO     | PID=26588 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 20:06:49] 2025-11-28 19:06:31,923 | INFO     | .. there are 9 such processes running
[2025-11-28 20:06:49] 2025-11-28 19:06:31,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 20:06:49] 2025-11-28 19:06:31,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 20:06:49] 2025-11-28 19:06:31,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 20:06:49] 2025-11-28 19:06:39,113 | INFO     | [monitor] cgroup control has ended
[2025-11-28 20:06:49] 2025-11-28 19:06:39,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076230354752)>', '<ExcThread(monitor, started 140075190974208)>']
[2025-11-28 20:06:49] 2025-11-28 19:06:39,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 20:06:49] 2025-11-28 19:06:39,977 | INFO     | [monitor] control thread has ended
[2025-11-28 20:06:49] 2025-11-28 19:06:44,391 | INFO     | all workflow threads have been joined
[2025-11-28 20:06:49] 2025-11-28 19:06:44,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 20:06:49] 2025-11-28 19:06:44,391 | INFO     | traces error code: 0
[2025-11-28 20:06:49] 2025-11-28 19:06:44,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 20:06:49] 2025-11-28 19:06:44,772 [wrapper] ==== pilot stdout END ====
[2025-11-28 20:06:49] 2025-11-28 19:06:44,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 20:06:49] 2025-11-28 19:06:44,958 [wrapper] pilotpid: 26588
[2025-11-28 20:06:49] 2025-11-28 19:06:45,067 [wrapper] Pilot exit status: 0
[2025-11-28 20:06:49] 2025-11-28 19:06:45,413 [wrapper] pandaids: 6896201975
[2025-11-28 20:06:49] 2025-11-28 19:06:46,497 [wrapper] cleanup supervisor_pilot 24311 26589
[2025-11-28 20:06:49] 2025-11-28 19:06:46,587 [wrapper] Test setup, not cleaning
[2025-11-28 20:06:49] 2025-11-28 19:06:46,677 [wrapper] apfmon messages muted
[2025-11-28 20:06:49] 2025-11-28 19:06:46,754 [wrapper] ==== wrapper stdout END ====
[2025-11-28 20:06:49] 2025-11-28 19:06:46,833 [wrapper] ==== wrapper stderr END ====
[2025-11-28 20:06:49]  *** Error codes and diagnostics ***
[2025-11-28 20:06:49]     "exeErrorCode": 0,
[2025-11-28 20:06:49]     "exeErrorDiag": "",
[2025-11-28 20:06:49]     "pilotErrorCode": 0,
[2025-11-28 20:06:49]     "pilotErrorDiag": "",
[2025-11-28 20:06:49]  *** Listing of results directory ***
[2025-11-28 20:06:49] total 1308768
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc    576529 Nov 24 20:02 pilot3.tar.gz
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc      5112 Nov 24 20:27 queuedata.json
[2025-11-28 20:06:49] -rwx------. 1 boinc boinc     36292 Nov 24 20:30 runpilot2-wrapper.sh
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc       100 Nov 27 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 20:06:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 21:23 run_atlas
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc       105 Nov 27 21:23 job.xml
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc 408487669 Nov 27 21:23 EVNT.47483658._003049.pool.root.1
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc      6392 Nov 27 21:23 init_data.xml
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:23 start_atlas.sh
[2025-11-28 20:06:49] drwxrwx--x. 2 boinc boinc        68 Nov 27 21:23 shared
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc    590102 Nov 27 21:23 input.tar.gz
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc         0 Nov 27 21:23 boinc_lockfile
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc      2782 Nov 27 21:23 pandaJob.out
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc    991500 Nov 27 21:27 agis_schedconf.cvmfs.json
[2025-11-28 20:06:49] drwx------. 5 boinc boinc      4096 Nov 27 21:27 pilot3
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc       533 Nov 28 19:37 boinc_task_state.xml
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc 901256041 Nov 28 20:03 HITS.47556173._000311.pool.root.1
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc      1032 Nov 28 20:04 memory_monitor_summary.json
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc   1516240 Nov 28 20:04 agis_ddmendpoints.agis.ALL.json
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc   2420378 Nov 28 20:04 log.47556173._000311.job.log.tgz.1
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc      8621 Nov 28 20:05 heartbeat.json
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc        95 Nov 28 20:06 pilot_heartbeat.json
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc      4884 Nov 28 20:06 pilotlog.txt
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc  10845762 Nov 28 20:06 log.47556173._000311.job.log.1
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc      8192 Nov 28 20:06 boinc_mmap_file
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc       353 Nov 28 20:06 output.list
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc        29 Nov 28 20:06 wrapper_checkpoint.txt
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc       620 Nov 28 20:06 runtime_log
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc  13281280 Nov 28 20:06 result.tar.gz
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc       662 Nov 28 20:06 ywnNDmpRrh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4AJKDm2NP7wm.diag
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc      8817 Nov 28 20:06 runtime_log.err
[2025-11-28 20:06:49] -rw-r--r--. 1 boinc boinc     21425 Nov 28 20:06 stderr.txt
[2025-11-28 20:06:49] HITS file was successfully produced:
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc 901256041 Nov 28 20:03 shared/HITS.pool.root.1
[2025-11-28 20:06:49]  *** Contents of shared directory: ***
[2025-11-28 20:06:49] total 1292620
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc 408487669 Nov 27 21:23 ATLAS.root_0
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:23 start_atlas.sh
[2025-11-28 20:06:49] -rw-r--r--. 2 boinc boinc    590102 Nov 27 21:23 input.tar.gz
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc 901256041 Nov 28 20:03 HITS.pool.root.1
[2025-11-28 20:06:49] -rw-------. 1 boinc boinc  13281280 Nov 28 20:06 result.tar.gz
20:06:50 (22804): run_atlas exited; CPU time 306029.085443
20:06:50 (22804): called boinc_finish(0)

</stderr_txt>
]]>

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