Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:12 (1062580): wrapper (7.7.26015): starting
12:36:12 (1062580): wrapper: running run_atlas (--nthreads 11)
[2025-11-25 12:36:12] Arguments: --nthreads 11
[2025-11-25 12:36:12] Threads: 11
[2025-11-25 12:36:12] Checking for CVMFS
[2025-11-25 12:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:36:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:36:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:36:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:36:13] 2.13.3.0 10223 28896 204020 153291 1 364 38612629 40960000 45025 16776704 0 374942416 99.773 222628378 50733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 12:36:13] CVMFS is ok
[2025-11-25 12:36:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:36:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:36:13] Further information can be found at the LHC@home message board.
[2025-11-25 12:36:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:36:13] Checking for apptainer binary...
[2025-11-25 12:36:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:36:13] Running /usr/bin/apptainer --version
[2025-11-25 12:36:14] apptainer version 1.4.4-1.el9
[2025-11-25 12:36:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:36:14] c8-7-6.aglt2.org
[2025-11-25 12:36:14] apptainer works
[2025-11-25 12:36:14] Set ATHENA_PROC_NUMBER=11
[2025-11-25 12:36:14] Set ATHENA_CORE_NUMBER=11
[2025-11-25 12:36:14] Starting ATLAS job with PandaID=6895401437
[2025-11-25 12:36:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:43:16]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:43:16] 2025-11-25 22:42:09,474 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:43:16] 2025-11-25 22:42:09,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:43:16] 2025-11-25 22:42:09,484 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:43:16] 2025-11-25 22:42:09,484 | INFO     | sum of square deviations: 8373320680.596647
[2025-11-25 17:43:16] 2025-11-25 22:42:09,485 | INFO     | sum of deviations: 124667735327.41003
[2025-11-25 17:43:16] 2025-11-25 22:42:09,485 | INFO     | mean x: 1764101361.0366666
[2025-11-25 17:43:16] 2025-11-25 22:42:09,485 | INFO     | mean y: 3244157.69
[2025-11-25 17:43:16] 2025-11-25 22:42:09,485 | INFO     | intersect: -26261905590.853004
[2025-11-25 17:43:16] 2025-11-25 22:42:09,486 | INFO     | chi2: 7.028001000876554
[2025-11-25 17:43:16] 2025-11-25 22:42:09,486 | INFO     | sum of square deviations: 7961879917.877968
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | sum of deviations: 244053912025.87433
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | mean x: 1764101208.5796611
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | mean y: 3288418.345762712
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | intersect: -54071352948.286064
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | chi2: 3.448525038349757
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | current chi2=3.448525038349757 (change=50.931637062663384 %)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,487 | INFO     | sum of square deviations: 7564070993.686198
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | sum of deviations: 285391453385.1761
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | mean x: 1764101056.1068966
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | mean y: 3304085.9620689657
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | intersect: -66556008318.81489
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | chi2: 2.329800285796946
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | current chi2=2.329800285796946 (change=32.44067362457548 %)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,489 | INFO     | sum of square deviations: 7179625039.768383
[2025-11-25 17:43:16] 2025-11-25 22:42:09,490 | INFO     | sum of deviations: 276000642468.21063
[2025-11-25 17:43:16] 2025-11-25 22:42:09,490 | INFO     | mean x: 1764100903.6105263
[2025-11-25 17:43:16] 2025-11-25 22:42:09,490 | INFO     | mean y: 3300360.596491228
[2025-11-25 17:43:16] 2025-11-25 22:42:09,490 | INFO     | intersect: -67812634326.566986
[2025-11-25 17:43:16] 2025-11-25 22:42:09,491 | INFO     | chi2: 2.3281122196807797
[2025-11-25 17:43:16] 2025-11-25 22:42:09,491 | INFO     | current chi2=2.3281122196807797 (change=0.0724553999953272 %)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,491 | INFO     | right removable region: 284
[2025-11-25 17:43:16] 2025-11-25 22:42:09,491 | INFO     | sum of square deviations: 7961415707.877974
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | sum of deviations: 38563622360.3764
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | mean x: 1764101513.5796611
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | mean y: 3275872.9627118646
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | intersect: -8541704953.467107
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | chi2: 4.866432068706299
[2025-11-25 17:43:16] 2025-11-25 22:42:09,492 | INFO     | current chi2=4.866432068706299 (change=30.756525673525903 %)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,493 | INFO     | sum of square deviations: 7563303674.468944
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | sum of deviations: 21369173442.08283
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | mean x: 1764101666.110345
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | mean y: 3282454.872413793
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | intersect: -4980967298.291988
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | chi2: 4.836885022895695
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | current chi2=4.836885022895695 (change=0.607160346501231 %)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,494 | INFO     | left removable region: 20
[2025-11-25 17:43:16] 2025-11-25 22:42:09,495 | INFO     | sum of square deviations: 5706221124.9962015
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | sum of deviations: 142155472214.947
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | mean x: 1764101483.246212
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | mean y: 3355475.446969697
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | intersect: -43944587286.0808
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | chi2: 0.024482451581128193
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | current memory leak: 24.91 B/s (using 264 data points, chi2=0.02)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | could have reported an average CPU frequency of 3790 MHz (13 samples)
[2025-11-25 17:43:16] 2025-11-25 22:42:09,496 | INFO     | ..............................
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . Timing measurements:
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . get job = 0 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . initial setup = 2 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . payload setup = 12 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . stage-in = 0 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . payload execution = 18274 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . stage-out = 3 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | . log creation = 0 s
[2025-11-25 17:43:16] 2025-11-25 22:42:09,497 | INFO     | ..............................
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | 
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | job summary report
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | --------------------------------------------------
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | PanDA job id: 6895401437
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | task id: 47556149
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | errors: (none)
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | pilot state: finished 
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | transexitcode: 0
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | exeerrorcode: 0
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | exeerrordiag: 
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | exitcode: 0
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | exitmsg: OK
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | cpuconsumptiontime: 132520 s
[2025-11-25 17:43:16] 2025-11-25 22:42:10,061 | INFO     | nevents: 1000
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | neventsw: 0
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | pid: 1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | pgrp: 1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | corecount: 11
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | event service: False
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | sizes: {0: 2283481, 1: 2284337, 11: 2284627, 18290: 2317975, 18294: 2326969, 18295: 2327025, 18312: 2327399}
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | --------------------------------------------------
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | 
[2025-11-25 17:43:16] 2025-11-25 22:42:10,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 17:43:16] 2025-11-25 22:42:10,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | job 6895401437 has completed (purged errors)
[2025-11-25 17:43:16] 2025-11-25 22:42:10,171 | INFO     | overall cleanup function is called
[2025-11-25 17:43:16] 2025-11-25 22:42:11,195 | INFO     | --- collectZombieJob: --- 10, [1078116]
[2025-11-25 17:43:16] 2025-11-25 22:42:11,195 | INFO     | zombie collector waiting for pid 1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:11,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:43:16] 2025-11-25 22:42:11,195 | INFO     | collected zombie processes
[2025-11-25 17:43:16] 2025-11-25 22:42:11,195 | INFO     | will attempt to kill all subprocesses of pid=1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:11,901 | INFO     | process IDs to be killed: [1078116] (in reverse order)
[2025-11-25 17:43:16] 2025-11-25 22:42:12,140 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:43:16] 2025-11-25 22:42:12,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:43:16] 2025-11-25 22:42:12,178 | INFO     | did not find any defunct processes belonging to 1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:12,206 | INFO     | did not find any defunct processes belonging to 1078116
[2025-11-25 17:43:16] 2025-11-25 22:42:12,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:43:16] 2025-11-25 22:42:12,207 | INFO     | ready for new job
[2025-11-25 17:43:16] 2025-11-25 22:42:12,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:43:16] 2025-11-25 22:42:12,209 | INFO     | ***************************************
[2025-11-25 17:43:16] 2025-11-25 22:42:12,209 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:43:16] 2025-11-25 22:42:12,209 | INFO     | ***************************************
[2025-11-25 17:43:16] 2025-11-25 22:42:12,209 | INFO     | 
[2025-11-25 17:43:16] 2025-11-25 22:42:12,214 | INFO     | architecture information:
[2025-11-25 17:43:16] 2025-11-25 22:42:12,214 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:43:16] 2025-11-25 22:42:12,227 | INFO     | cat /etc/os-release:
[2025-11-25 17:43:16] NAME="CentOS Linux"
[2025-11-25 17:43:16] VERSION="7 (Core)"
[2025-11-25 17:43:16] ID="centos"
[2025-11-25 17:43:16] ID_LIKE="rhel fedora"
[2025-11-25 17:43:16] VERSION_ID="7"
[2025-11-25 17:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:43:16] ANSI_COLOR="0;31"
[2025-11-25 17:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:43:16] HOME_URL="https://www.centos.org/"
[2025-11-25 17:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:43:16] 
[2025-11-25 17:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:43:16] 
[2025-11-25 17:43:16] 2025-11-25 22:42:12,228 | INFO     | ***************************************
[2025-11-25 17:43:16] 2025-11-25 22:42:12,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 17:43:16] 2025-11-25 22:42:12,773 | INFO     | sufficient remaining disk space (158008868864 B)
[2025-11-25 17:43:16] 2025-11-25 22:42:12,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:43:16] 2025-11-25 22:42:12,773 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:43:16] 2025-11-25 22:42:12,773 | INFO     | update_server=False
[2025-11-25 17:43:16] 2025-11-25 22:42:12,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:43:16] 2025-11-25 22:42:12,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:43:16] 2025-11-25 22:42:12,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:43:16] 2025-11-25 22:42:12,774 | INFO     | aborting loop
[2025-11-25 17:43:16] 2025-11-25 22:42:12,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:43:16] 2025-11-25 22:42:13,085 | INFO     | all job control threads have been joined
[2025-11-25 17:43:16] 2025-11-25 22:42:13,485 | INFO     | all data control threads have been joined
[2025-11-25 17:43:16] 2025-11-25 22:42:13,692 | INFO     | all payload control threads have been joined
[2025-11-25 17:43:16] 2025-11-25 22:42:13,778 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:13,782 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:13,960 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,054 | INFO     | [job] validate thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,091 | INFO     | [job] control thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,213 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,464 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,490 | INFO     | [data] control thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:43:16] 2025-11-25 22:42:14,692 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,698 | INFO     | [payload] control thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,784 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,791 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:14,957 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:15,622 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:16,787 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:43:16] 2025-11-25 22:42:42,059 | INFO     | PID=1067108 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 17:43:16] 2025-11-25 22:42:42,061 | INFO     | .. there are 66 such processes running
[2025-11-25 17:43:16] 2025-11-25 22:42:42,062 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:43:16] 2025-11-25 22:42:42,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:43:16] 2025-11-25 22:42:42,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:43:16] 2025-11-25 22:43:10,113 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:43:16] 2025-11-25 22:43:10,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987561445184)>', '<ExcThread(monitor, started 139986909247232)>']
[2025-11-25 17:43:16] 2025-11-25 22:43:11,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:43:16] 2025-11-25 22:43:11,283 | INFO     | [monitor] control thread has ended
[2025-11-25 17:43:16] 2025-11-25 22:43:15,994 | INFO     | all workflow threads have been joined
[2025-11-25 17:43:16] 2025-11-25 22:43:15,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:43:16] 2025-11-25 22:43:15,995 | INFO     | traces error code: 0
[2025-11-25 17:43:16] 2025-11-25 22:43:15,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:43:16] 2025-11-25 22:43:16,132 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:43:16] 2025-11-25 22:43:16,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:43:16] 2025-11-25 22:43:16,156 [wrapper] pilotpid: 1067108
[2025-11-25 17:43:16] 2025-11-25 22:43:16,162 [wrapper] Pilot exit status: 0
[2025-11-25 17:43:16] 2025-11-25 22:43:16,195 [wrapper] pandaids: 6895401437
[2025-11-25 17:43:16] 2025-11-25 22:43:16,353 [wrapper] cleanup supervisor_pilot 3286334 1067109
[2025-11-25 17:43:16] 2025-11-25 22:43:16,363 [wrapper] Test setup, not cleaning
[2025-11-25 17:43:16] 2025-11-25 22:43:16,367 [wrapper] apfmon messages muted
[2025-11-25 17:43:16] 2025-11-25 22:43:16,370 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:43:16] 2025-11-25 22:43:16,375 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:43:16]  *** Error codes and diagnostics ***
[2025-11-25 17:43:16]     "exeErrorCode": 0,
[2025-11-25 17:43:16]     "exeErrorDiag": "",
[2025-11-25 17:43:16]     "pilotErrorCode": 0,
[2025-11-25 17:43:16]     "pilotErrorDiag": "",
[2025-11-25 17:43:16]  *** Listing of results directory ***
[2025-11-25 17:43:16] total 1304008
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 02:32 pilot3.tar.gz
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 02:39 queuedata.json
[2025-11-25 17:43:16] -rwx------. 1 boincer umatlas     36292 Nov 24 02:40 runpilot2-wrapper.sh
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:43:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:36 run_atlas
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:36 job.xml
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas 412228251 Nov 25 12:36 EVNT.47483658._001264.pool.root.1
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:36 start_atlas.sh
[2025-11-25 17:43:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:36 shared
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 12:36 input.tar.gz
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:36 boinc_lockfile
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 12:36 pandaJob.out
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas        57 Nov 25 12:36 setup.sh.local
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas    991543 Nov 25 12:36 agis_schedconf.cvmfs.json
[2025-11-25 17:43:16] drwx------. 5 boincer umatlas      4096 Nov 25 12:36 pilot3
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas       532 Nov 25 17:32 boinc_task_state.xml
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas      7174 Nov 25 17:38 init_data.xml
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas 910593671 Nov 25 17:41 HITS.47556149._002501.pool.root.1
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas      1075 Nov 25 17:41 memory_monitor_summary.json
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas   1516240 Nov 25 17:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas   1916370 Nov 25 17:41 log.47556149._002501.job.log.tgz.1
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas      8632 Nov 25 17:42 heartbeat.json
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas        95 Nov 25 17:42 pilot_heartbeat.json
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 17:43 boinc_mmap_file
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas        29 Nov 25 17:43 wrapper_checkpoint.txt
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas      4825 Nov 25 17:43 pilotlog.txt
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas   2365102 Nov 25 17:43 log.47556149._002501.job.log.1
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas       353 Nov 25 17:43 output.list
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas       620 Nov 25 17:43 runtime_log
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas   4300800 Nov 25 17:43 result.tar.gz
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas       664 Nov 25 17:43 XWoNDmGMgh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWWLKDmuUK5cm.diag
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas      9335 Nov 25 17:43 runtime_log.err
[2025-11-25 17:43:16] -rw-r--r--. 1 boincer umatlas     21114 Nov 25 17:43 stderr.txt
[2025-11-25 17:43:16] HITS file was successfully produced:
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas 910593671 Nov 25 17:41 shared/HITS.pool.root.1
[2025-11-25 17:43:16]  *** Contents of shared directory: ***
[2025-11-25 17:43:16] total 1296624
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas 412228251 Nov 25 12:36 ATLAS.root_0
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:36 start_atlas.sh
[2025-11-25 17:43:16] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 12:36 input.tar.gz
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas 910593671 Nov 25 17:41 HITS.pool.root.1
[2025-11-25 17:43:16] -rw-------. 1 boincer umatlas   4300800 Nov 25 17:43 result.tar.gz
17:43:18 (1062580): run_atlas exited; CPU time 132772.080680
17:43:18 (1062580): called boinc_finish(0)

</stderr_txt>
]]>

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