Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:12 (718501): wrapper (7.7.26015): starting
12:25:12 (718501): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:25:12] Arguments: --nthreads 8
[2025-11-25 12:25:12] Threads: 8
[2025-11-25 12:25:12] Checking for CVMFS
[2025-11-25 12:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:25:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:25:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:25:34] 2.13.3.0 11334 28907 337528 153291 2 276 21272417 32935936 31239 16776704 0 123162867 99.508 163467758 40798 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 12:25:34] CVMFS is ok
[2025-11-25 12:25:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:25:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:25:34] Further information can be found at the LHC@home message board.
[2025-11-25 12:25:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:25:34] Checking for apptainer binary...
[2025-11-25 12:25:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:25:34] Running /usr/bin/apptainer --version
[2025-11-25 12:25:35] apptainer version 1.4.4-1.el9
[2025-11-25 12:25:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:25:35] c6-4-5-2.aglt2.org
[2025-11-25 12:25:35] apptainer works
[2025-11-25 12:25:35] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:25:35] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:25:35] Starting ATLAS job with PandaID=6895366644
[2025-11-25 12:25:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:52:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:52:04] 2025-11-26 06:51:07,099 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895366644/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,100 | INFO     | extracted standard info from prmon json
[2025-11-26 01:52:04] 2025-11-26 06:51:07,100 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:52:04] 2025-11-26 06:51:07,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:52:04] 2025-11-26 06:51:07,112 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:52:04] 2025-11-26 06:51:07,114 | INFO     | sum of square deviations: 152888137491.17596
[2025-11-26 01:52:04] 2025-11-26 06:51:07,125 | INFO     | sum of deviations: 1305076060885.645
[2025-11-26 01:52:04] 2025-11-26 06:51:07,125 | INFO     | mean x: 1764115788.2797468
[2025-11-26 01:52:04] 2025-11-26 06:51:07,125 | INFO     | mean y: 2840792.2278481014
[2025-11-26 01:52:04] 2025-11-26 06:51:07,125 | INFO     | intersect: -15055916032.821352
[2025-11-26 01:52:04] 2025-11-26 06:51:07,126 | INFO     | chi2: 7.241153764738193
[2025-11-26 01:52:04] 2025-11-26 06:51:07,127 | INFO     | sum of square deviations: 150004056407.73746
[2025-11-26 01:52:04] 2025-11-26 06:51:07,138 | INFO     | sum of deviations: 1550712659716.1304
[2025-11-26 01:52:04] 2025-11-26 06:51:07,138 | INFO     | mean x: 1764115635.7910829
[2025-11-26 01:52:04] 2025-11-26 06:51:07,138 | INFO     | mean y: 2853771.647133758
[2025-11-26 01:52:04] 2025-11-26 06:51:07,138 | INFO     | intersect: -18234229378.88088
[2025-11-26 01:52:04] 2025-11-26 06:51:07,139 | INFO     | chi2: 4.320641754971306
[2025-11-26 01:52:04] 2025-11-26 06:51:07,139 | INFO     | current chi2=4.320641754971306 (change=40.332136350821976 %)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,140 | INFO     | sum of square deviations: 147156344475.39853
[2025-11-26 01:52:04] 2025-11-26 06:51:07,151 | INFO     | sum of deviations: 1612725721000.713
[2025-11-26 01:52:04] 2025-11-26 06:51:07,151 | INFO     | mean x: 1764115483.298718
[2025-11-26 01:52:04] 2025-11-26 06:51:07,151 | INFO     | mean y: 2857082.3102564104
[2025-11-26 01:52:04] 2025-11-26 06:51:07,151 | INFO     | intersect: -19330556131.192585
[2025-11-26 01:52:04] 2025-11-26 06:51:07,152 | INFO     | chi2: 3.916902131696505
[2025-11-26 01:52:04] 2025-11-26 06:51:07,152 | INFO     | current chi2=3.916902131696505 (change=9.34443645577096 %)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,153 | INFO     | right removable region: 779
[2025-11-26 01:52:04] 2025-11-26 06:51:07,153 | INFO     | sum of square deviations: 150003198747.73767
[2025-11-26 01:52:04] 2025-11-26 06:51:07,164 | INFO     | sum of deviations: 1031909114470.8562
[2025-11-26 01:52:04] 2025-11-26 06:51:07,164 | INFO     | mean x: 1764115940.7910829
[2025-11-26 01:52:04] 2025-11-26 06:51:07,164 | INFO     | mean y: 2855225.7796178344
[2025-11-26 01:52:04] 2025-11-26 06:51:07,164 | INFO     | intersect: -12132934767.2528
[2025-11-26 01:52:04] 2025-11-26 06:51:07,165 | INFO     | chi2: 4.075806243429957
[2025-11-26 01:52:04] 2025-11-26 06:51:07,165 | INFO     | current chi2=4.075806243429957 (change=43.71330348931875 %)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,166 | INFO     | sum of square deviations: 147154915733.39835
[2025-11-26 01:52:04] 2025-11-26 06:51:07,177 | INFO     | sum of deviations: 921649015401.3842
[2025-11-26 01:52:04] 2025-11-26 06:51:07,177 | INFO     | mean x: 1764116093.298718
[2025-11-26 01:52:04] 2025-11-26 06:51:07,177 | INFO     | mean y: 2861119.3846153845
[2025-11-26 01:52:04] 2025-11-26 06:51:07,177 | INFO     | intersect: -11046011100.3389
[2025-11-26 01:52:04] 2025-11-26 06:51:07,178 | INFO     | chi2: 3.5336324476078347
[2025-11-26 01:52:04] 2025-11-26 06:51:07,178 | INFO     | current chi2=3.5336324476078347 (change=13.302246560323757 %)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,178 | INFO     | left removable region: 20
[2025-11-26 01:52:04] 2025-11-26 06:51:07,179 | INFO     | sum of square deviations: 135587348693.69449
[2025-11-26 01:52:04] 2025-11-26 06:51:07,189 | INFO     | sum of deviations: 1133019017568.2605
[2025-11-26 01:52:04] 2025-11-26 06:51:07,189 | INFO     | mean x: 1764116062.8247695
[2025-11-26 01:52:04] 2025-11-26 06:51:07,189 | INFO     | mean y: 2882952.347826087
[2025-11-26 01:52:04] 2025-11-26 06:51:07,190 | INFO     | intersect: -14738736141.433167
[2025-11-26 01:52:04] 2025-11-26 06:51:07,190 | INFO     | chi2: 0.11262948835948876
[2025-11-26 01:52:04] 2025-11-26 06:51:07,191 | INFO     | current memory leak: 8.36 B/s (using 759 data points, chi2=0.11)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | could have reported an average CPU frequency of 3153 MHz (30 samples)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | ..............................
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | . Timing measurements:
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | . get job = 0 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | . initial setup = 5 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | . payload setup = 42 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,192 | INFO     | . stage-in = 0 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,193 | INFO     | . payload execution = 48156 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,193 | INFO     | . stage-out = 3 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,193 | INFO     | . log creation = 1 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,193 | INFO     | ..............................
[2025-11-26 01:52:04] 2025-11-26 06:51:07,627 | INFO     | time since job start (48275s) is within the limit (172800.0s)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,798 | INFO     | 
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | job summary report
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | --------------------------------------------------
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | PanDA job id: 6895366644
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | task id: 47556137
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | errors: (none)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | pilot state: finished 
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | transexitcode: 0
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | exeerrorcode: 0
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | exeerrordiag: 
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | exitcode: 0
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | exitmsg: OK
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | cpuconsumptiontime: 224932 s
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | nevents: 1000
[2025-11-26 01:52:04] 2025-11-26 06:51:07,799 | INFO     | neventsw: 0
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | pid: 739010
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | pgrp: 739010
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | corecount: 8
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | event service: False
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 27: 2284661, 34: 2284689, 48200: 2332653, 48204: 2341647, 48206: 2341703, 48214: 2341949}
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | --------------------------------------------------
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | 
[2025-11-26 01:52:04] 2025-11-26 06:51:07,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 01:52:04] 2025-11-26 06:51:07,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | job 6895366644 has completed (purged errors)
[2025-11-26 01:52:04] 2025-11-26 06:51:07,823 | INFO     | overall cleanup function is called
[2025-11-26 01:52:04] 2025-11-26 06:51:08,839 | INFO     | --- collectZombieJob: --- 10, [739010]
[2025-11-26 01:52:04] 2025-11-26 06:51:08,839 | INFO     | zombie collector waiting for pid 739010
[2025-11-26 01:52:04] 2025-11-26 06:51:08,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:52:04] 2025-11-26 06:51:08,840 | INFO     | collected zombie processes
[2025-11-26 01:52:04] 2025-11-26 06:51:08,840 | INFO     | will attempt to kill all subprocesses of pid=739010
[2025-11-26 01:52:04] 2025-11-26 06:51:09,492 | INFO     | PID=726232 has CPU usage=18.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 01:52:04] 2025-11-26 06:51:09,492 | INFO     | .. there are 46 such processes running
[2025-11-26 01:52:04] 2025-11-26 06:51:09,517 | INFO     | process IDs to be killed: [739010] (in reverse order)
[2025-11-26 01:52:04] 2025-11-26 06:51:09,658 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:52:04] 2025-11-26 06:51:09,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:52:04] 2025-11-26 06:51:09,694 | INFO     | did not find any defunct processes belonging to 739010
[2025-11-26 01:52:04] 2025-11-26 06:51:09,709 | INFO     | did not find any defunct processes belonging to 739010
[2025-11-26 01:52:04] 2025-11-26 06:51:09,710 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:52:04] 2025-11-26 06:51:09,710 | INFO     | ready for new job
[2025-11-26 01:52:04] 2025-11-26 06:51:09,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:52:04] 2025-11-26 06:51:09,714 | INFO     | ***************************************
[2025-11-26 01:52:04] 2025-11-26 06:51:09,714 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:52:04] 2025-11-26 06:51:09,715 | INFO     | ***************************************
[2025-11-26 01:52:04] 2025-11-26 06:51:09,715 | INFO     | 
[2025-11-26 01:52:04] 2025-11-26 06:51:09,718 | INFO     | architecture information:
[2025-11-26 01:52:04] 2025-11-26 06:51:09,718 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:52:04] 2025-11-26 06:51:09,735 | INFO     | cat /etc/os-release:
[2025-11-26 01:52:04] NAME="CentOS Linux"
[2025-11-26 01:52:04] VERSION="7 (Core)"
[2025-11-26 01:52:04] ID="centos"
[2025-11-26 01:52:04] ID_LIKE="rhel fedora"
[2025-11-26 01:52:04] VERSION_ID="7"
[2025-11-26 01:52:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:52:04] ANSI_COLOR="0;31"
[2025-11-26 01:52:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:52:04] HOME_URL="https://www.centos.org/"
[2025-11-26 01:52:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:52:04] 
[2025-11-26 01:52:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:52:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:52:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:52:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:52:04] 
[2025-11-26 01:52:04] 2025-11-26 06:51:09,735 | INFO     | ***************************************
[2025-11-26 01:52:04] 2025-11-26 06:51:10,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 01:52:04] 2025-11-26 06:51:10,263 | INFO     | sufficient remaining disk space (72004665344 B)
[2025-11-26 01:52:04] 2025-11-26 06:51:10,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:52:04] 2025-11-26 06:51:10,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | INFO     | update_server=False
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:52:04] 2025-11-26 06:51:10,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:52:04] 2025-11-26 06:51:10,422 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 01:52:04] 2025-11-26 06:51:10,422 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 01:52:04] 2025-11-26 06:51:10,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:52:04] 2025-11-26 06:51:10,423 | INFO     | will abort loop
[2025-11-26 01:52:04] 2025-11-26 06:51:10,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:52:04] 2025-11-26 06:51:10,994 | INFO     | all payload control threads have been joined
[2025-11-26 01:52:04] 2025-11-26 06:51:11,270 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:11,295 | INFO     | all data control threads have been joined
[2025-11-26 01:52:04] 2025-11-26 06:51:11,429 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:11,448 | INFO     | all job control threads have been joined
[2025-11-26 01:52:04] 2025-11-26 06:51:11,682 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:11,700 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:11,999 | INFO     | [payload] control thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,219 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,223 | INFO     | [job] validate thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,300 | INFO     | [data] control thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:52:04] 2025-11-26 06:51:12,335 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,373 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,413 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,454 | INFO     | [job] control thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:12,686 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:13,338 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:14,272 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:20,734 | INFO     | job.realtimelogging is not enabled
[2025-11-26 01:52:04] 2025-11-26 06:51:21,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:52:04] 2025-11-26 06:51:59,175 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:52:04] 2025-11-26 06:51:59,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945441716032)>', '<ExcThread(monitor, started 139945083639552)>']
[2025-11-26 01:52:04] 2025-11-26 06:51:59,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:52:04] 2025-11-26 06:51:59,586 | INFO     | [monitor] control thread has ended
[2025-11-26 01:52:04] 2025-11-26 06:52:04,303 | INFO     | all workflow threads have been joined
[2025-11-26 01:52:04] 2025-11-26 06:52:04,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:52:04] 2025-11-26 06:52:04,305 | INFO     | traces error code: 0
[2025-11-26 01:52:04] 2025-11-26 06:52:04,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:52:04] 2025-11-26 06:52:04,524 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:52:04] 2025-11-26 06:52:04,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:52:04] 2025-11-26 06:52:04,551 [wrapper] pilotpid: 726232
[2025-11-26 01:52:04] 2025-11-26 06:52:04,565 [wrapper] Pilot exit status: 0
[2025-11-26 01:52:04] 2025-11-26 06:52:04,576 [wrapper] pandaids: 6895366644
[2025-11-26 01:52:04] 2025-11-26 06:52:04,646 [wrapper] cleanup supervisor_pilot  619693 726233
[2025-11-26 01:52:04] 2025-11-26 06:52:04,648 [wrapper] Test setup, not cleaning
[2025-11-26 01:52:04] 2025-11-26 06:52:04,651 [wrapper] apfmon messages muted
[2025-11-26 01:52:04] 2025-11-26 06:52:04,653 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:52:04] 2025-11-26 06:52:04,655 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:52:04]  *** Error codes and diagnostics ***
[2025-11-26 01:52:04]     "exeErrorCode": 0,
[2025-11-26 01:52:04]     "exeErrorDiag": "",
[2025-11-26 01:52:04]     "pilotErrorCode": 0,
[2025-11-26 01:52:04]     "pilotErrorDiag": "",
[2025-11-26 01:52:04]  *** Listing of results directory ***
[2025-11-26 01:52:04] total 1317224
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 13:49 queuedata.json
[2025-11-26 01:52:04] -rwx------. 1 boincer umatlas     36292 Nov 23 13:49 runpilot2-wrapper.sh
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:52:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:25 run_atlas
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:25 job.xml
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas 409657776 Nov 25 12:25 EVNT.47483658._000849.pool.root.1
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 12:25 input.tar.gz
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:25 start_atlas.sh
[2025-11-26 01:52:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:25 shared
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:25 boinc_lockfile
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 12:25 pandaJob.out
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas        57 Nov 25 12:25 setup.sh.local
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas    991543 Nov 25 12:26 agis_schedconf.cvmfs.json
[2025-11-26 01:52:04] drwx------. 5 boincer umatlas      4096 Nov 25 12:26 pilot3
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas       533 Nov 26 01:41 boinc_task_state.xml
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas      6876 Nov 26 01:48 init_data.xml
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas 918726445 Nov 26 01:50 HITS.47556137._008360.pool.root.1
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas      1063 Nov 26 01:50 memory_monitor_summary.json
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas   1516240 Nov 26 01:50 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas   2004504 Nov 26 01:50 log.47556137._008360.job.log.tgz.1
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas        95 Nov 26 01:50 pilot_heartbeat.json
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas      8627 Nov 26 01:51 heartbeat.json
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas        29 Nov 26 01:52 wrapper_checkpoint.txt
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas      4810 Nov 26 01:52 pilotlog.txt
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 01:52 boinc_mmap_file
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas   6261411 Nov 26 01:52 log.47556137._008360.job.log.1
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas       353 Nov 26 01:52 output.list
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas       620 Nov 26 01:52 runtime_log
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas   8284160 Nov 26 01:52 result.tar.gz
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 01:52 runtime_log.err
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas       660 Nov 26 01:52 DZjMDmpKUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmngIKDmzaMbLn.diag
[2025-11-26 01:52:04] -rw-r--r--. 1 boincer umatlas     21337 Nov 26 01:52 stderr.txt
[2025-11-26 01:52:04] HITS file was successfully produced:
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas 918726445 Nov 26 01:50 shared/HITS.pool.root.1
[2025-11-26 01:52:04]  *** Contents of shared directory: ***
[2025-11-26 01:52:04] total 1305948
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas 409657776 Nov 25 12:25 ATLAS.root_0
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 12:25 input.tar.gz
[2025-11-26 01:52:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:25 start_atlas.sh
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas 918726445 Nov 26 01:50 HITS.pool.root.1
[2025-11-26 01:52:04] -rw-------. 1 boincer umatlas   8284160 Nov 26 01:52 result.tar.gz
01:52:06 (718501): run_atlas exited; CPU time 226064.742139
01:52:06 (718501): called boinc_finish(0)

</stderr_txt>
]]>

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