Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:44 (25602): wrapper (7.7.26015): starting
12:11:44 (25602): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:11:44] Arguments: --nthreads 8
[2025-11-25 12:11:44] Threads: 8
[2025-11-25 12:11:44] Checking for CVMFS
[2025-11-25 12:11:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:11:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:11:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:11:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:11:45] 2.11.2.0 12825 116503 138528 153290 3 49 10553552 18432001 1885 130560 0 81498189 99.975 4621952 22825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:11:45] CVMFS is ok
[2025-11-25 12:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:11:45] Further information can be found at the LHC@home message board.
[2025-11-25 12:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:11:45] Checking for apptainer binary...
[2025-11-25 12:11:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:11:45] Running /usr/bin/apptainer --version
[2025-11-25 12:11:45] apptainer version 1.3.2-1.el7
[2025-11-25 12:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:11:46] c-206-8.aglt2.org
[2025-11-25 12:11:46] apptainer works
[2025-11-25 12:11:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:11:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:11:46] Starting ATLAS job with PandaID=6895374042
[2025-11-25 12:11:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:34:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:34:59] 2025-11-26 12:34:18,789 | INFO     | monitor loop #4980: job 0:6895374042 is in state 'finished'
[2025-11-26 07:34:59] 2025-11-26 12:34:18,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:34:59] 2025-11-26 12:34:19,126 | INFO     | time since job start (69742s) is within the limit (172800.0s)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,657 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:34:59] 2025-11-26 12:34:20,661 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.0833333333335
[2025-11-26 07:34:59] 2025-11-26 12:34:20,664 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895374042/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,664 | INFO     | extracted standard info from prmon json
[2025-11-26 07:34:59] 2025-11-26 12:34:20,664 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:34:59] 2025-11-26 12:34:20,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:34:59] 2025-11-26 12:34:20,679 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:34:59] 2025-11-26 12:34:20,680 | INFO     | sum of square deviations: 463035987461.9813
[2025-11-26 07:34:59] 2025-11-26 12:34:20,704 | INFO     | sum of deviations: 2257461133447.5015
[2025-11-26 07:34:59] 2025-11-26 12:34:20,704 | INFO     | mean x: 1764125574.6911635
[2025-11-26 07:34:59] 2025-11-26 12:34:20,704 | INFO     | mean y: 2859196.970253718
[2025-11-26 07:34:59] 2025-11-26 12:34:20,704 | INFO     | intersect: -8597865211.546757
[2025-11-26 07:34:59] 2025-11-26 12:34:20,705 | INFO     | chi2: 5.605537279402357
[2025-11-26 07:34:59] 2025-11-26 12:34:20,706 | INFO     | sum of square deviations: 456986152182.0811
[2025-11-26 07:34:59] 2025-11-26 12:34:20,730 | INFO     | sum of deviations: 2598585859795.71
[2025-11-26 07:34:59] 2025-11-26 12:34:20,730 | INFO     | mean x: 1764125422.1942003
[2025-11-26 07:34:59] 2025-11-26 12:34:20,730 | INFO     | mean y: 2867793.865553603
[2025-11-26 07:34:59] 2025-11-26 12:34:20,730 | INFO     | intersect: -10028577043.424503
[2025-11-26 07:34:59] 2025-11-26 12:34:20,731 | INFO     | chi2: 2.9763614003585688
[2025-11-26 07:34:59] 2025-11-26 12:34:20,731 | INFO     | current chi2=2.9763614003585688 (change=46.90319139799035 %)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,732 | INFO     | sum of square deviations: 450989248127.1618
[2025-11-26 07:34:59] 2025-11-26 12:34:20,767 | INFO     | sum of deviations: 2718757642052.4204
[2025-11-26 07:34:59] 2025-11-26 12:34:20,767 | INFO     | mean x: 1764125269.697264
[2025-11-26 07:34:59] 2025-11-26 12:34:20,767 | INFO     | mean y: 2870847.1994704325
[2025-11-26 07:34:59] 2025-11-26 12:34:20,767 | INFO     | intersect: -10632036921.543764
[2025-11-26 07:34:59] 2025-11-26 12:34:20,769 | INFO     | chi2: 2.519791766039356
[2025-11-26 07:34:59] 2025-11-26 12:34:20,769 | INFO     | current chi2=2.519791766039356 (change=15.339858737054202 %)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,769 | INFO     | right removable region: 1132
[2025-11-26 07:34:59] 2025-11-26 12:34:20,771 | INFO     | sum of square deviations: 456985739761.46936
[2025-11-26 07:34:59] 2025-11-26 12:34:20,813 | INFO     | sum of deviations: 1952834551714.3782
[2025-11-26 07:34:59] 2025-11-26 12:34:20,813 | INFO     | mean x: 1764125727.1933217
[2025-11-26 07:34:59] 2025-11-26 12:34:20,813 | INFO     | mean y: 2866867.4710017573
[2025-11-26 07:34:59] 2025-11-26 12:34:20,813 | INFO     | intersect: -7535761526.993924
[2025-11-26 07:34:59] 2025-11-26 12:34:20,815 | INFO     | chi2: 3.5081862986789973
[2025-11-26 07:34:59] 2025-11-26 12:34:20,815 | INFO     | current chi2=3.5081862986789973 (change=37.41569944472784 %)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,817 | INFO     | sum of square deviations: 450988562610.72516
[2025-11-26 07:34:59] 2025-11-26 12:34:20,856 | INFO     | sum of deviations: 1857502298048.4812
[2025-11-26 07:34:59] 2025-11-26 12:34:20,856 | INFO     | mean x: 1764125879.6937335
[2025-11-26 07:34:59] 2025-11-26 12:34:20,856 | INFO     | mean y: 2869291.3212709622
[2025-11-26 07:34:59] 2025-11-26 12:34:20,856 | INFO     | intersect: -7263097403.285054
[2025-11-26 07:34:59] 2025-11-26 12:34:20,857 | INFO     | chi2: 3.4053722966109645
[2025-11-26 07:34:59] 2025-11-26 12:34:20,857 | INFO     | current chi2=3.4053722966109645 (change=2.9306882050918244 %)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,857 | INFO     | left removable region: 20
[2025-11-26 07:34:59] 2025-11-26 12:34:20,858 | INFO     | sum of square deviations: 426373705047.47345
[2025-11-26 07:34:59] 2025-11-26 12:34:20,880 | INFO     | sum of deviations: 2185759446914.8074
[2025-11-26 07:34:59] 2025-11-26 12:34:20,880 | INFO     | mean x: 1764125849.2023382
[2025-11-26 07:34:59] 2025-11-26 12:34:20,880 | INFO     | mean y: 2885027.6897482015
[2025-11-26 07:34:59] 2025-11-26 12:34:20,880 | INFO     | intersect: -9040718493.806227
[2025-11-26 07:34:59] 2025-11-26 12:34:20,881 | INFO     | chi2: 0.2161123123482611
[2025-11-26 07:34:59] 2025-11-26 12:34:20,881 | INFO     | current memory leak: 5.13 B/s (using 1112 data points, chi2=0.22)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,882 | INFO     | could have reported an average CPU frequency of 2631 MHz (41 samples)
[2025-11-26 07:34:59] 2025-11-26 12:34:20,882 | INFO     | ..............................
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . Timing measurements:
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . get job = 0 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . initial setup = 2 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . payload setup = 5 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . stage-in = 0 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . payload execution = 69705 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . stage-out = 4 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | . log creation = 0 s
[2025-11-26 07:34:59] 2025-11-26 12:34:20,883 | INFO     | ..............................
[2025-11-26 07:34:59] 2025-11-26 12:34:21,014 | INFO     | 
[2025-11-26 07:34:59] 2025-11-26 12:34:21,014 | INFO     | job summary report
[2025-11-26 07:34:59] 2025-11-26 12:34:21,014 | INFO     | --------------------------------------------------
[2025-11-26 07:34:59] 2025-11-26 12:34:21,014 | INFO     | PanDA job id: 6895374042
[2025-11-26 07:34:59] 2025-11-26 12:34:21,014 | INFO     | task id: 47556149
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | errors: (none)
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | pilot state: finished 
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | transexitcode: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | exeerrorcode: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:21,015 | INFO     | exeerrordiag: 
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | exitcode: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | exitmsg: OK
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | cpuconsumptiontime: 536647 s
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | nevents: 1000
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | neventsw: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:21,016 | INFO     | pid: 3418
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | pgrp: 3418
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | corecount: 8
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | event service: False
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | sizes: {0: 2284314, 1: 2284314, 4: 2284604, 12: 2284632, 69714: 2340972, 69719: 2349966, 69722: 2350150, 69728: 2350492}
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | --------------------------------------------------
[2025-11-26 07:34:59] 2025-11-26 12:34:21,017 | INFO     | 
[2025-11-26 07:34:59] 2025-11-26 12:34:21,018 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 07:34:59] 2025-11-26 12:34:21,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:34:59] 2025-11-26 12:34:21,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:34:59] 2025-11-26 12:34:21,045 | INFO     | job 6895374042 has completed (purged errors)
[2025-11-26 07:34:59] 2025-11-26 12:34:21,045 | INFO     | overall cleanup function is called
[2025-11-26 07:34:59] 2025-11-26 12:34:22,062 | INFO     | --- collectZombieJob: --- 10, [3418]
[2025-11-26 07:34:59] 2025-11-26 12:34:22,062 | INFO     | zombie collector waiting for pid 3418
[2025-11-26 07:34:59] 2025-11-26 12:34:22,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:34:59] 2025-11-26 12:34:22,062 | INFO     | collected zombie processes
[2025-11-26 07:34:59] 2025-11-26 12:34:22,063 | INFO     | will attempt to kill all subprocesses of pid=3418
[2025-11-26 07:34:59] 2025-11-26 12:34:22,240 | INFO     | process IDs to be killed: [3418] (in reverse order)
[2025-11-26 07:34:59] 2025-11-26 12:34:22,305 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:34:59] 2025-11-26 12:34:22,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:34:59] 2025-11-26 12:34:22,311 | INFO     | did not find any defunct processes belonging to 3418
[2025-11-26 07:34:59] 2025-11-26 12:34:22,316 | INFO     | did not find any defunct processes belonging to 3418
[2025-11-26 07:34:59] 2025-11-26 12:34:22,318 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:34:59] 2025-11-26 12:34:22,318 | INFO     | ready for new job
[2025-11-26 07:34:59] 2025-11-26 12:34:22,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:34:59] 2025-11-26 12:34:22,323 | INFO     | ***************************************
[2025-11-26 07:34:59] 2025-11-26 12:34:22,323 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:34:59] 2025-11-26 12:34:22,324 | INFO     | ***************************************
[2025-11-26 07:34:59] 2025-11-26 12:34:22,324 | INFO     | 
[2025-11-26 07:34:59] 2025-11-26 12:34:22,325 | INFO     | architecture information:
[2025-11-26 07:34:59] 2025-11-26 12:34:22,326 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:34:59] 2025-11-26 12:34:22,338 | INFO     | cat /etc/os-release:
[2025-11-26 07:34:59] NAME="CentOS Linux"
[2025-11-26 07:34:59] VERSION="7 (Core)"
[2025-11-26 07:34:59] ID="centos"
[2025-11-26 07:34:59] ID_LIKE="rhel fedora"
[2025-11-26 07:34:59] VERSION_ID="7"
[2025-11-26 07:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:34:59] ANSI_COLOR="0;31"
[2025-11-26 07:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:34:59] HOME_URL="https://www.centos.org/"
[2025-11-26 07:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:34:59] 
[2025-11-26 07:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:34:59] 
[2025-11-26 07:34:59] 2025-11-26 12:34:22,338 | INFO     | ***************************************
[2025-11-26 07:34:59] 2025-11-26 12:34:22,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 07:34:59] 2025-11-26 12:34:22,860 | INFO     | sufficient remaining disk space (25702694912 B)
[2025-11-26 07:34:59] 2025-11-26 12:34:22,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:34:59] 2025-11-26 12:34:22,861 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:34:59] 2025-11-26 12:34:22,861 | INFO     | update_server=False
[2025-11-26 07:34:59] 2025-11-26 12:34:22,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:34:59] 2025-11-26 12:34:22,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:34:59] 2025-11-26 12:34:22,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:34:59] 2025-11-26 12:34:22,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:34:59] 2025-11-26 12:34:22,863 | INFO     | aborting loop
[2025-11-26 07:34:59] 2025-11-26 12:34:23,845 | INFO     | all data control threads have been joined
[2025-11-26 07:34:59] 2025-11-26 12:34:23,868 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:23,868 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:23,869 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:23,922 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,045 | INFO     | all payload control threads have been joined
[2025-11-26 07:34:59] 2025-11-26 12:34:24,128 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,135 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,143 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,229 | INFO     | [job] validate thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,275 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,454 | INFO     | all job control threads have been joined
[2025-11-26 07:34:59] 2025-11-26 12:34:24,850 | INFO     | [data] control thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,868 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:24,899 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:25,051 | INFO     | [payload] control thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:25,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:34:59] 2025-11-26 12:34:25,460 | INFO     | [job] control thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:29,365 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:34:59] 2025-11-26 12:34:52,367 | INFO     | PID=29272 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:34:59] 2025-11-26 12:34:52,367 | INFO     | .. there are 3 such processes running
[2025-11-26 07:34:59] 2025-11-26 12:34:52,368 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:34:59] 2025-11-26 12:34:52,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:34:59] 2025-11-26 12:34:52,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:34:59] 2025-11-26 12:34:52,991 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:34:59] 2025-11-26 12:34:53,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806874699584)>', '<ExcThread(monitor, started 139806570944256)>']
[2025-11-26 07:34:59] 2025-11-26 12:34:54,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:34:59] 2025-11-26 12:34:54,379 | INFO     | [monitor] control thread has ended
[2025-11-26 07:34:59] 2025-11-26 12:34:58,701 | INFO     | all workflow threads have been joined
[2025-11-26 07:34:59] 2025-11-26 12:34:58,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:34:59] 2025-11-26 12:34:58,702 | INFO     | traces error code: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:58,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:34:59] 2025-11-26 12:34:58,837 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:34:59] 2025-11-26 12:34:58,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:34:59] 2025-11-26 12:34:58,841 [wrapper] pilotpid: 29272
[2025-11-26 07:34:59] 2025-11-26 12:34:58,844 [wrapper] Pilot exit status: 0
[2025-11-26 07:34:59] 2025-11-26 12:34:58,852 [wrapper] pandaids: 6895374042
[2025-11-26 07:34:59] 2025-11-26 12:34:58,888 [wrapper] cleanup supervisor_pilot 29844 29273
[2025-11-26 07:34:59] 2025-11-26 12:34:58,890 [wrapper] Test setup, not cleaning
[2025-11-26 07:34:59] 2025-11-26 12:34:58,893 [wrapper] apfmon messages muted
[2025-11-26 07:34:59] 2025-11-26 12:34:58,895 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:34:59] 2025-11-26 12:34:58,897 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:34:59]  *** Error codes and diagnostics ***
[2025-11-26 07:34:59]     "exeErrorCode": 0,
[2025-11-26 07:34:59]     "exeErrorDiag": "",
[2025-11-26 07:34:59]     "pilotErrorCode": 0,
[2025-11-26 07:34:59]     "pilotErrorDiag": "",
[2025-11-26 07:34:59]  *** Listing of results directory ***
[2025-11-26 07:34:59] total 1316868
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:43 queuedata.json
[2025-11-26 07:34:59] -rwx------ 1 boincer umatlas     36292 Nov 23 17:46 runpilot2-wrapper.sh
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas       100 Nov 25 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:34:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 12:11 run_atlas
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas       105 Nov 25 12:11 job.xml
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas 408438497 Nov 25 12:11 EVNT.47483658._001200.pool.root.1
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:11 start_atlas.sh
[2025-11-26 07:34:59] drwxrwx--x 2 boincer umatlas      4096 Nov 25 12:11 shared
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 12:11 input.tar.gz
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas         0 Nov 25 12:11 boinc_lockfile
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 12:11 pandaJob.out
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas        57 Nov 25 12:11 setup.sh.local
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas    991543 Nov 25 12:11 agis_schedconf.cvmfs.json
[2025-11-26 07:34:59] drwx------ 5 boincer umatlas      4096 Nov 25 12:11 pilot3
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas       533 Nov 26 07:21 boinc_task_state.xml
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas      5953 Nov 26 07:29 init_data.xml
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas 912168921 Nov 26 07:33 HITS.47556149._001867.pool.root.1
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas      1068 Nov 26 07:34 memory_monitor_summary.json
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas   1516240 Nov 26 07:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas   2317140 Nov 26 07:34 log.47556149._001867.job.log.tgz.1
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas      8658 Nov 26 07:34 heartbeat.json
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas        95 Nov 26 07:34 pilot_heartbeat.json
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:34 boinc_mmap_file
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:34 wrapper_checkpoint.txt
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas      4821 Nov 26 07:34 pilotlog.txt
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas   9650322 Nov 26 07:34 log.47556149._001867.job.log.1
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas       353 Nov 26 07:34 output.list
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:34 runtime_log
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas  11991040 Nov 26 07:34 result.tar.gz
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 07:34 runtime_log.err
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas       667 Nov 26 07:34 bSeKDm21Xh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDGLKDm4YrSOn.diag
[2025-11-26 07:34:59] -rw-r--r-- 1 boincer umatlas     21307 Nov 26 07:34 stderr.txt
[2025-11-26 07:34:59] HITS file was successfully produced:
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas 912168921 Nov 26 07:33 shared/HITS.pool.root.1
[2025-11-26 07:34:59]  *** Contents of shared directory: ***
[2025-11-26 07:34:59] total 1301976
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas 408438497 Nov 25 12:11 ATLAS.root_0
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:11 start_atlas.sh
[2025-11-26 07:34:59] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 12:11 input.tar.gz
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas 912168921 Nov 26 07:33 HITS.pool.root.1
[2025-11-26 07:34:59] -rw------- 1 boincer umatlas  11991040 Nov 26 07:34 result.tar.gz
07:35:00 (25602): run_atlas exited; CPU time 535348.581583
07:35:00 (25602): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN