Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:31 (1131231): wrapper (7.7.26015): starting
20:26:31 (1131231): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 20:26:31] Arguments: --nthreads 4
[2025-11-28 20:26:31] Threads: 4
[2025-11-28 20:26:31] Checking for CVMFS
[2025-11-28 20:26:31] No cvmfs_config command found, will try listing directly
[2025-11-28 20:26:31] CVMFS is ok
[2025-11-28 20:26:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 20:26:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 20:26:31] Further information can be found at the LHC@home message board.
[2025-11-28 20:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 20:26:31] Checking for apptainer binary...
[2025-11-28 20:26:31] which: no apptainer in ((null))
[2025-11-28 20:26:31] apptainer is not installed, using version from CVMFS
[2025-11-28 20:26:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 20:26:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-28 20:26:31] apptainer works
[2025-11-28 20:26:31] Set ATHENA_PROC_NUMBER=4
[2025-11-28 20:26:31] Set ATHENA_CORE_NUMBER=4
[2025-11-28 20:26:31] Starting ATLAS job with PandaID=6896045953
[2025-11-28 20:26:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 13:54:39]  *** The last 200 lines of the pilot log: ***
[2025-11-29 13:54:39] 2025-11-29 12:05:16,326 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-29 13:54:39] 2025-11-29 12:05:16,336 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2573.116515625001
[2025-11-29 13:54:39] 2025-11-29 12:05:16,349 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6896045953/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,350 | INFO     | extracted standard info from prmon json
[2025-11-29 13:54:39] 2025-11-29 12:05:16,350 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 13:54:39] 2025-11-29 12:05:16,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 13:54:39] 2025-11-29 12:05:16,370 | INFO     | fitting pss+swap vs Time
[2025-11-29 13:54:39] 2025-11-29 12:05:16,371 | INFO     | sum of square deviations: 293638121425.5
[2025-11-29 13:54:39] 2025-11-29 12:05:16,391 | INFO     | sum of deviations: 696519282351.0002
[2025-11-29 13:54:39] 2025-11-29 12:05:16,391 | INFO     | mean x: 1764387949.5
[2025-11-29 13:54:39] 2025-11-29 12:05:16,391 | INFO     | mean y: 2298608.3564154785
[2025-11-29 13:54:39] 2025-11-29 12:05:16,391 | INFO     | intersect: -4182887642.013632
[2025-11-29 13:54:39] 2025-11-29 12:05:16,392 | INFO     | chi2: 4.278290957343383
[2025-11-29 13:54:39] 2025-11-29 12:05:16,394 | INFO     | sum of square deviations: 289175609848.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,413 | INFO     | sum of deviations: 912423293998.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,413 | INFO     | mean x: 1764387797.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,413 | INFO     | mean y: 2305979.649948823
[2025-11-29 13:54:39] 2025-11-29 12:05:16,414 | INFO     | intersect: -5564790520.897982
[2025-11-29 13:54:39] 2025-11-29 12:05:16,415 | INFO     | chi2: 1.970415310872132
[2025-11-29 13:54:39] 2025-11-29 12:05:16,415 | INFO     | current chi2=1.970415310872132 (change=53.9438684624744 %)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,416 | INFO     | sum of square deviations: 284758540983.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,435 | INFO     | sum of deviations: 949108727975.0001
[2025-11-29 13:54:39] 2025-11-29 12:05:16,435 | INFO     | mean x: 1764387644.5
[2025-11-29 13:54:39] 2025-11-29 12:05:16,436 | INFO     | mean y: 2307242.3436213993
[2025-11-29 13:54:39] 2025-11-29 12:05:16,436 | INFO     | intersect: -5878449510.8881445
[2025-11-29 13:54:39] 2025-11-29 12:05:16,437 | INFO     | chi2: 1.806194922211322
[2025-11-29 13:54:39] 2025-11-29 12:05:16,437 | INFO     | current chi2=1.806194922211322 (change=8.334303319442025 %)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,437 | INFO     | right removable region: 971
[2025-11-29 13:54:39] 2025-11-29 12:05:16,438 | INFO     | sum of square deviations: 289175609848.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,458 | INFO     | sum of deviations: 527915003763.99994
[2025-11-29 13:54:39] 2025-11-29 12:05:16,458 | INFO     | mean x: 1764388102.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,458 | INFO     | mean y: 2304359.69703173
[2025-11-29 13:54:39] 2025-11-29 12:05:16,458 | INFO     | intersect: -3218738217.158206
[2025-11-29 13:54:39] 2025-11-29 12:05:16,459 | INFO     | chi2: 2.630011853580073
[2025-11-29 13:54:39] 2025-11-29 12:05:16,459 | INFO     | current chi2=2.630011853580073 (change=38.5265780237353 %)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,461 | INFO     | sum of square deviations: 284758540983.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,479 | INFO     | sum of deviations: 512834024820.99976
[2025-11-29 13:54:39] 2025-11-29 12:05:16,479 | INFO     | mean x: 1764388254.5
[2025-11-29 13:54:39] 2025-11-29 12:05:16,479 | INFO     | mean y: 2304879.925925926
[2025-11-29 13:54:39] 2025-11-29 12:05:16,479 | INFO     | intersect: -3175258563.0478606
[2025-11-29 13:54:39] 2025-11-29 12:05:16,481 | INFO     | chi2: 2.627869348267113
[2025-11-29 13:54:39] 2025-11-29 12:05:16,481 | INFO     | current chi2=2.627869348267113 (change=0.08146371317846145 %)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,481 | INFO     | left removable region: 20
[2025-11-29 13:54:39] 2025-11-29 12:05:16,482 | INFO     | sum of square deviations: 266697837700.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,499 | INFO     | sum of deviations: 760017047704.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,500 | INFO     | mean x: 1764388224.0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,500 | INFO     | mean y: 2313685.5226077815
[2025-11-29 13:54:39] 2025-11-29 12:05:16,500 | INFO     | intersect: -5025717814.742473
[2025-11-29 13:54:39] 2025-11-29 12:05:16,501 | INFO     | chi2: 0.1327250519142695
[2025-11-29 13:54:39] 2025-11-29 12:05:16,501 | INFO     | current memory leak: 2.85 B/s (using 951 data points, chi2=0.13)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,502 | INFO     | could have reported an average CPU frequency of 2626 MHz (37 samples)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | ..............................
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . Timing measurements:
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . get job = 0 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . initial setup = 1 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . payload setup = 5 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . stage-in = 0 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . payload execution = 59878 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . stage-out = 2 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | . log creation = 0 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,503 | INFO     | ..............................
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | 
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | job summary report
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | --------------------------------------------------
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | PanDA job id: 6896045953
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | task id: 47556185
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | errors: (none)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 13:54:39] 2025-11-29 12:05:16,597 | INFO     | pilot state: finished 
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | transexitcode: 0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | exeerrorcode: 0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | exeerrordiag: 
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | exitcode: 0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | exitmsg: OK
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | cpuconsumptiontime: 237298 s
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | nevents: 1000
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | neventsw: 0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | pid: 1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | pgrp: 1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | corecount: 4
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | event service: False
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | sizes: {0: 2284321, 1: 2284321, 5: 2284611, 11: 2284667, 59888: 2336870, 59891: 2345886, 59894: 2346070, 59899: 2346316}
[2025-11-29 13:54:39] 2025-11-29 12:05:16,598 | INFO     | --------------------------------------------------
[2025-11-29 13:54:39] 2025-11-29 12:05:16,599 | INFO     | 
[2025-11-29 13:54:39] 2025-11-29 12:05:16,599 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-29 13:54:39] 2025-11-29 12:05:16,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 13:54:39] 2025-11-29 12:05:16,621 | INFO     | job 6896045953 has completed (purged errors)
[2025-11-29 13:54:39] 2025-11-29 12:05:16,621 | INFO     | overall cleanup function is called
[2025-11-29 13:54:39] 2025-11-29 12:05:17,635 | INFO     | --- collectZombieJob: --- 10, [1141992]
[2025-11-29 13:54:39] 2025-11-29 12:05:17,635 | INFO     | zombie collector waiting for pid 1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:17,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 13:54:39] 2025-11-29 12:05:17,635 | INFO     | collected zombie processes
[2025-11-29 13:54:39] 2025-11-29 12:05:17,635 | INFO     | will attempt to kill all subprocesses of pid=1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:18,018 | INFO     | process IDs to be killed: [1141992] (in reverse order)
[2025-11-29 13:54:39] 2025-11-29 12:05:18,130 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 13:54:39] 2025-11-29 12:05:18,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 13:54:39] 2025-11-29 12:05:18,144 | INFO     | did not find any defunct processes belonging to 1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:18,157 | INFO     | did not find any defunct processes belonging to 1141992
[2025-11-29 13:54:39] 2025-11-29 12:05:18,158 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 13:54:39] 2025-11-29 12:05:18,158 | INFO     | ready for new job
[2025-11-29 13:54:39] 2025-11-29 12:05:18,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 13:54:39] 2025-11-29 12:05:18,163 | INFO     | ***************************************
[2025-11-29 13:54:39] 2025-11-29 12:05:18,164 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 13:54:39] 2025-11-29 12:05:18,164 | INFO     | ***************************************
[2025-11-29 13:54:39] 2025-11-29 12:05:18,164 | INFO     | 
[2025-11-29 13:54:39] 2025-11-29 12:05:18,168 | INFO     | architecture information:
[2025-11-29 13:54:39] 2025-11-29 12:05:18,168 | INFO     | executing command: cat /etc/os-release
[2025-11-29 13:54:39] 2025-11-29 12:05:18,182 | INFO     | cat /etc/os-release:
[2025-11-29 13:54:39] NAME="CentOS Linux"
[2025-11-29 13:54:39] VERSION="7 (Core)"
[2025-11-29 13:54:39] ID="centos"
[2025-11-29 13:54:39] ID_LIKE="rhel fedora"
[2025-11-29 13:54:39] VERSION_ID="7"
[2025-11-29 13:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 13:54:39] ANSI_COLOR="0;31"
[2025-11-29 13:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 13:54:39] HOME_URL="https://www.centos.org/"
[2025-11-29 13:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 13:54:39] 
[2025-11-29 13:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 13:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 13:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 13:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 13:54:39] 
[2025-11-29 13:54:39] 2025-11-29 12:05:18,183 | INFO     | ***************************************
[2025-11-29 13:54:39] 2025-11-29 12:05:18,686 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-29 13:54:39] 2025-11-29 12:05:18,702 | INFO     | sufficient remaining disk space (651849367552 B)
[2025-11-29 13:54:39] 2025-11-29 12:05:18,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 13:54:39] 2025-11-29 12:05:18,702 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 13:54:39] 2025-11-29 12:05:18,702 | INFO     | update_server=False
[2025-11-29 13:54:39] 2025-11-29 12:05:18,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 13:54:39] 2025-11-29 12:05:19,047 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 13:54:39] 2025-11-29 12:05:19,048 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 13:54:39] 2025-11-29 12:05:19,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 13:54:39] 2025-11-29 12:05:19,048 | INFO     | will abort loop
[2025-11-29 13:54:39] 2025-11-29 12:05:19,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 13:54:39] 2025-11-29 12:05:19,439 | INFO     | all data control threads have been joined
[2025-11-29 13:54:39] 2025-11-29 12:05:19,656 | INFO     | all job control threads have been joined
[2025-11-29 13:54:39] 2025-11-29 12:05:19,708 | INFO     | [job] retrieve thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:19,931 | INFO     | [payload] failed_post thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,044 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,053 | INFO     | [job] job monitor thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,055 | INFO     | all payload control threads have been joined
[2025-11-29 13:54:39] 2025-11-29 12:05:20,062 | INFO     | [job] validate thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,187 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,197 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,445 | INFO     | [data] control thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:20,661 | INFO     | [job] control thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:21,060 | INFO     | [payload] control thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:21,072 | INFO     | [data] copytool_in thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:21,082 | INFO     | [data] copytool_out thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:21,208 | INFO     | [payload] validate_post thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:21,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 13:54:39] 2025-11-29 12:05:22,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 13:54:39] 2025-11-29 12:05:22,610 | INFO     | [job] queue monitor thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:26,199 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:29,168 | INFO     | job.realtimelogging is not enabled
[2025-11-29 13:54:39] 2025-11-29 12:05:30,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 13:54:39] 2025-11-29 12:05:48,838 | INFO     | PID=1135016 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 13:54:39] 2025-11-29 12:05:48,839 | INFO     | .. there are 4 such processes running
[2025-11-29 13:54:39] 2025-11-29 12:05:48,839 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 13:54:39] 2025-11-29 12:05:48,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 13:54:39] 2025-11-29 12:05:48,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 13:54:39] 2025-11-29 12:06:18,237 | INFO     | [monitor] cgroup control has ended
[2025-11-29 13:54:39] 2025-11-29 12:06:19,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23184660780864)>', '<ExcThread(monitor, started 23184352970496)>']
[2025-11-29 13:54:39] 2025-11-29 12:06:19,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 13:54:39] 2025-11-29 12:06:19,992 | INFO     | [monitor] control thread has ended
[2025-11-29 13:54:39] 2025-11-29 12:06:24,624 | INFO     | all workflow threads have been joined
[2025-11-29 13:54:39] 2025-11-29 12:06:24,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 13:54:39] 2025-11-29 12:06:24,624 | INFO     | traces error code: 0
[2025-11-29 13:54:39] 2025-11-29 12:06:24,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 13:54:39] 2025-11-29 12:06:24,767 [wrapper] ==== pilot stdout END ====
[2025-11-29 13:54:39] 2025-11-29 12:06:24,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 13:54:39] 2025-11-29 12:06:24,774 [wrapper] pilotpid: 1135016
[2025-11-29 13:54:39] 2025-11-29 12:06:24,777 [wrapper] Pilot exit status: 0
[2025-11-29 13:54:39] 2025-11-29 12:06:24,788 [wrapper] pandaids: 6896045953
[2025-11-29 13:54:39] 2025-11-29 12:06:24,869 [wrapper] cleanup supervisor_pilot 1912511 1135017
[2025-11-29 13:54:39] 2025-11-29 12:06:24,872 [wrapper] Test setup, not cleaning
[2025-11-29 13:54:39] 2025-11-29 12:06:24,875 [wrapper] apfmon messages muted
[2025-11-29 13:54:39] 2025-11-29 12:06:24,877 [wrapper] ==== wrapper stdout END ====
[2025-11-29 13:54:39] 2025-11-29 12:06:24,880 [wrapper] ==== wrapper stderr END ====
[2025-11-29 13:54:39]  *** Error codes and diagnostics ***
[2025-11-29 13:54:39]     "exeErrorCode": 0,
[2025-11-29 13:54:39]     "exeErrorDiag": "",
[2025-11-29 13:54:39]     "pilotErrorCode": 0,
[2025-11-29 13:54:39]     "pilotErrorDiag": "",
[2025-11-29 13:54:39]  *** Listing of results directory ***
[2025-11-29 13:54:39] total 1324844
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc    576529 Nov 24 20:02 pilot3.tar.gz
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc      5112 Nov 24 20:11 queuedata.json
[2025-11-29 13:54:39] -rwx------ 1 boinc boinc     36292 Nov 24 20:12 runpilot2-wrapper.sh
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc       100 Nov 28 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 13:54:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 20:26 run_atlas
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc       105 Nov 28 20:26 job.xml
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc      6634 Nov 28 20:26 init_data.xml
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc 410263963 Nov 28 20:26 EVNT.47483658._004241.pool.root.1
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc     15847 Nov 28 20:26 start_atlas.sh
[2025-11-29 13:54:39] drwxrwx--x 2 boinc boinc      4096 Nov 28 20:26 shared
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc    590103 Nov 28 20:26 input.tar.gz
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc         0 Nov 28 20:26 boinc_lockfile
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc      2783 Nov 28 20:26 pandaJob.out
[2025-11-29 13:54:39] -rw------- 1 boinc boinc    991794 Nov 28 20:26 agis_schedconf.cvmfs.json
[2025-11-29 13:54:39] drwx------ 5 boinc boinc      4096 Nov 28 20:26 pilot3
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc       532 Nov 29 12:57 boinc_task_state.xml
[2025-11-29 13:54:39] -rw------- 1 boinc boinc 922215658 Nov 29 13:04 HITS.47556185._000050.pool.root.1
[2025-11-29 13:54:39] -rw------- 1 boinc boinc      1058 Nov 29 13:05 memory_monitor_summary.json
[2025-11-29 13:54:39] -rw------- 1 boinc boinc   1516240 Nov 29 13:05 agis_ddmendpoints.agis.ALL.json
[2025-11-29 13:54:39] -rw------- 1 boinc boinc   1724243 Nov 29 13:05 log.47556185._000050.job.log.tgz.1
[2025-11-29 13:54:39] -rw------- 1 boinc boinc      8654 Nov 29 13:05 heartbeat.json
[2025-11-29 13:54:39] -rw------- 1 boinc boinc        95 Nov 29 13:05 pilot_heartbeat.json
[2025-11-29 13:54:39] -rw------- 1 boinc boinc      5091 Nov 29 13:06 pilotlog.txt
[2025-11-29 13:54:39] -rw------- 1 boinc boinc   8397533 Nov 29 13:06 log.47556185._000050.job.log.1
[2025-11-29 13:54:39] -rw------- 1 boinc boinc       353 Nov 29 13:06 output.list
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc       620 Nov 29 13:06 runtime_log
[2025-11-29 13:54:39] -rw------- 1 boinc boinc  10137600 Nov 29 13:06 result.tar.gz
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc      9206 Nov 29 13:06 runtime_log.err
[2025-11-29 13:54:39] -rw------- 1 boinc boinc       675 Nov 29 13:06 XTfNDmnArh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhAJKDm2vWB9n.diag
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc        28 Nov 29 13:54 wrapper_checkpoint.txt
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc      8192 Nov 29 13:54 boinc_mmap_file
[2025-11-29 13:54:39] -rw-r--r-- 1 boinc boinc     20998 Nov 29 13:54 stderr.txt
[2025-11-29 13:54:39] HITS file was successfully produced:
[2025-11-29 13:54:39] -rw------- 1 boinc boinc 922215658 Nov 29 13:04 shared/HITS.pool.root.1
[2025-11-29 13:54:39]  *** Contents of shared directory: ***
[2025-11-29 13:54:39] total 1311760
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc 410263963 Nov 28 20:26 ATLAS.root_0
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc     15847 Nov 28 20:26 start_atlas.sh
[2025-11-29 13:54:39] -rw-r--r-- 2 boinc boinc    590103 Nov 28 20:26 input.tar.gz
[2025-11-29 13:54:39] -rw------- 1 boinc boinc 922215658 Nov 29 13:04 HITS.pool.root.1
[2025-11-29 13:54:39] -rw------- 1 boinc boinc  10137600 Nov 29 13:06 result.tar.gz
13:54:41 (1131231): run_atlas exited; CPU time 239575.452048
13:54:41 (1131231): called boinc_finish(0)

</stderr_txt>
]]>

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