Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:48:06 (15882): wrapper (7.7.26015): starting
12:48:06 (15882): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:48:06] Arguments: --nthreads 12
[2025-11-25 12:48:06] Threads: 12
[2025-11-25 12:48:06] Checking for CVMFS
[2025-11-25 12:48:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:48:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:48:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:48:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:48:07] 2.11.2.0 14820 141906 92172 153292 2 16 16245097 20275200 1 130560 0 69062835 99.962 5705451 36005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:48:07] CVMFS is ok
[2025-11-25 12:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:48:07] Further information can be found at the LHC@home message board.
[2025-11-25 12:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:48:07] Checking for apptainer binary...
[2025-11-25 12:48:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:48:07] Running /usr/bin/apptainer --version
[2025-11-25 12:48:07] apptainer version 1.3.2-1.el7
[2025-11-25 12:48:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:48:08] c-205-27.aglt2.org
[2025-11-25 12:48:08] apptainer works
[2025-11-25 12:48:08] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:48:08] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:48:08] Starting ATLAS job with PandaID=6896044955
[2025-11-25 12:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:53:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:53:11] 2025-11-26 00:52:31,045 | INFO     | time since job start (25448s) is within the limit (172800.0s)
[2025-11-25 19:53:11] 2025-11-26 00:52:33,051 | INFO     | time since job start (25450s) is within the limit (172800.0s)
[2025-11-25 19:53:11] 2025-11-26 00:52:33,488 | INFO     | monitor loop #1905: job 0:6896044955 is in state 'finished'
[2025-11-25 19:53:11] 2025-11-26 00:52:33,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,334 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 19:53:11] 2025-11-26 00:52:34,338 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 19:53:11] 2025-11-26 00:52:34,340 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896044955/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,341 | INFO     | extracted standard info from prmon json
[2025-11-25 19:53:11] 2025-11-26 00:52:34,341 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:53:11] 2025-11-26 00:52:34,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:53:11] 2025-11-26 00:52:34,349 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:53:11] 2025-11-26 00:52:34,349 | INFO     | sum of square deviations: 22484498925.410103
[2025-11-25 19:53:11] 2025-11-26 00:52:34,353 | INFO     | sum of deviations: 354498240934.03564
[2025-11-25 19:53:11] 2025-11-26 00:52:34,353 | INFO     | mean x: 1764105621.1870503
[2025-11-25 19:53:11] 2025-11-26 00:52:34,353 | INFO     | mean y: 3430471.191846523
[2025-11-25 19:53:11] 2025-11-26 00:52:34,354 | INFO     | intersect: -27810057461.41714
[2025-11-25 19:53:11] 2025-11-26 00:52:34,354 | INFO     | chi2: 5.759225635062221
[2025-11-25 19:53:11] 2025-11-26 00:52:34,355 | INFO     | sum of square deviations: 21685382150.233063
[2025-11-25 19:53:11] 2025-11-26 00:52:34,358 | INFO     | sum of deviations: 515218902729.33984
[2025-11-25 19:53:11] 2025-11-26 00:52:34,358 | INFO     | mean x: 1764105468.6893203
[2025-11-25 19:53:11] 2025-11-26 00:52:34,358 | INFO     | mean y: 3461117.463592233
[2025-11-25 19:53:11] 2025-11-26 00:52:34,359 | INFO     | intersect: -41909587847.051476
[2025-11-25 19:53:11] 2025-11-26 00:52:34,359 | INFO     | chi2: 2.6303208889343312
[2025-11-25 19:53:11] 2025-11-26 00:52:34,359 | INFO     | current chi2=2.6303208889343312 (change=54.3285667968813 %)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,360 | INFO     | sum of square deviations: 20905428525.051643
[2025-11-25 19:53:11] 2025-11-26 00:52:34,363 | INFO     | sum of deviations: 542146046662.7664
[2025-11-25 19:53:11] 2025-11-26 00:52:34,363 | INFO     | mean x: 1764105316.191646
[2025-11-25 19:53:11] 2025-11-26 00:52:34,363 | INFO     | mean y: 3466337.9901719904
[2025-11-25 19:53:11] 2025-11-26 00:52:34,364 | INFO     | intersect: -45745546743.65905
[2025-11-25 19:53:11] 2025-11-26 00:52:34,364 | INFO     | chi2: 2.3495359571654517
[2025-11-25 19:53:11] 2025-11-26 00:52:34,364 | INFO     | current chi2=2.3495359571654517 (change=10.674930688119916 %)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,364 | INFO     | right removable region: 406
[2025-11-25 19:53:11] 2025-11-26 00:52:34,365 | INFO     | sum of square deviations: 21685334570.233055
[2025-11-25 19:53:11] 2025-11-26 00:52:34,368 | INFO     | sum of deviations: 225686544292.00937
[2025-11-25 19:53:11] 2025-11-26 00:52:34,368 | INFO     | mean x: 1764105773.6893203
[2025-11-25 19:53:11] 2025-11-26 00:52:34,369 | INFO     | mean y: 3454961.5703883497
[2025-11-25 19:53:11] 2025-11-26 00:52:34,369 | INFO     | intersect: -18356185031.07398
[2025-11-25 19:53:11] 2025-11-26 00:52:34,369 | INFO     | chi2: 3.566124954688174
[2025-11-25 19:53:11] 2025-11-26 00:52:34,369 | INFO     | current chi2=3.566124954688174 (change=38.07978397342915 %)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,370 | INFO     | sum of square deviations: 20905358252.43245
[2025-11-25 19:53:11] 2025-11-26 00:52:34,373 | INFO     | sum of deviations: 194418531800.32422
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | mean x: 1764105926.1891892
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | mean y: 3461067.5282555283
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | intersect: -16402614349.526428
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | chi2: 3.5161983816444433
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | current chi2=3.5161983816444433 (change=1.4000230972864622 %)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,374 | INFO     | left removable region: 20
[2025-11-25 19:53:11] 2025-11-26 00:52:34,375 | INFO     | sum of square deviations: 17833543582.3135
[2025-11-25 19:53:11] 2025-11-26 00:52:34,378 | INFO     | sum of deviations: 342292775252.7876
[2025-11-25 19:53:11] 2025-11-26 00:52:34,378 | INFO     | mean x: 1764105895.6917098
[2025-11-25 19:53:11] 2025-11-26 00:52:34,378 | INFO     | mean y: 3506102.7461139895
[2025-11-25 19:53:11] 2025-11-26 00:52:34,379 | INFO     | intersect: -33856321030.823784
[2025-11-25 19:53:11] 2025-11-26 00:52:34,379 | INFO     | chi2: 0.05570730666191329
[2025-11-25 19:53:11] 2025-11-26 00:52:34,379 | INFO     | current memory leak: 19.19 B/s (using 386 data points, chi2=0.06)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | could have reported an average CPU frequency of 2347 MHz (18 samples)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | ..............................
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . Timing measurements:
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . get job = 0 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . initial setup = 2 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . payload setup = 7 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . stage-in = 0 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . payload execution = 25412 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,380 | INFO     | . stage-out = 3 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,381 | INFO     | . log creation = 0 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,381 | INFO     | ..............................
[2025-11-25 19:53:11] 2025-11-26 00:52:34,460 | INFO     | 
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | job summary report
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | --------------------------------------------------
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | PanDA job id: 6896044955
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | task id: 47556173
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | errors: (none)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | pilot state: finished 
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | transexitcode: 0
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | exeerrorcode: 0
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | exeerrordiag: 
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | exitcode: 0
[2025-11-25 19:53:11] 2025-11-26 00:52:34,462 | INFO     | exitmsg: OK
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | cpuconsumptiontime: 292196 s
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | nevents: 1000
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | neventsw: 0
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | pid: 25948
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | pgrp: 25948
[2025-11-25 19:53:11] 2025-11-26 00:52:34,463 | INFO     | corecount: 12
[2025-11-25 19:53:11] 2025-11-26 00:52:34,464 | INFO     | event service: False
[2025-11-25 19:53:11] 2025-11-26 00:52:34,464 | INFO     | sizes: {0: 2284313, 5: 2284575, 11: 2284631, 25423: 2321727, 25427: 2330721, 25430: 2330805, 25435: 2331179}
[2025-11-25 19:53:11] 2025-11-26 00:52:34,464 | INFO     | --------------------------------------------------
[2025-11-25 19:53:11] 2025-11-26 00:52:34,464 | INFO     | 
[2025-11-25 19:53:11] 2025-11-26 00:52:34,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 19:53:11] 2025-11-26 00:52:34,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,490 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:53:11] 2025-11-26 00:52:34,493 | INFO     | job 6896044955 has completed (purged errors)
[2025-11-25 19:53:11] 2025-11-26 00:52:34,493 | INFO     | overall cleanup function is called
[2025-11-25 19:53:11] 2025-11-26 00:52:35,510 | INFO     | --- collectZombieJob: --- 10, [25948]
[2025-11-25 19:53:11] 2025-11-26 00:52:35,510 | INFO     | zombie collector waiting for pid 25948
[2025-11-25 19:53:11] 2025-11-26 00:52:35,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:53:11] 2025-11-26 00:52:35,510 | INFO     | collected zombie processes
[2025-11-25 19:53:11] 2025-11-26 00:52:35,510 | INFO     | will attempt to kill all subprocesses of pid=25948
[2025-11-25 19:53:11] 2025-11-26 00:52:35,604 | INFO     | process IDs to be killed: [25948] (in reverse order)
[2025-11-25 19:53:11] 2025-11-26 00:52:35,655 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:53:11] 2025-11-26 00:52:35,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:53:11] 2025-11-26 00:52:35,659 | INFO     | did not find any defunct processes belonging to 25948
[2025-11-25 19:53:11] 2025-11-26 00:52:35,661 | INFO     | did not find any defunct processes belonging to 25948
[2025-11-25 19:53:11] 2025-11-26 00:52:35,663 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:53:11] 2025-11-26 00:52:35,664 | INFO     | ready for new job
[2025-11-25 19:53:11] 2025-11-26 00:52:35,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:53:11] 2025-11-26 00:52:35,666 | INFO     | ***************************************
[2025-11-25 19:53:11] 2025-11-26 00:52:35,666 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:53:11] 2025-11-26 00:52:35,666 | INFO     | ***************************************
[2025-11-25 19:53:11] 2025-11-26 00:52:35,666 | INFO     | 
[2025-11-25 19:53:11] 2025-11-26 00:52:35,667 | INFO     | architecture information:
[2025-11-25 19:53:11] 2025-11-26 00:52:35,668 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:53:11] 2025-11-26 00:52:35,683 | INFO     | cat /etc/os-release:
[2025-11-25 19:53:11] NAME="CentOS Linux"
[2025-11-25 19:53:11] VERSION="7 (Core)"
[2025-11-25 19:53:11] ID="centos"
[2025-11-25 19:53:11] ID_LIKE="rhel fedora"
[2025-11-25 19:53:11] VERSION_ID="7"
[2025-11-25 19:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:53:11] ANSI_COLOR="0;31"
[2025-11-25 19:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:53:11] HOME_URL="https://www.centos.org/"
[2025-11-25 19:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:53:11] 
[2025-11-25 19:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:53:11] 
[2025-11-25 19:53:11] 2025-11-26 00:52:35,683 | INFO     | ***************************************
[2025-11-25 19:53:11] 2025-11-26 00:52:36,186 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 19:53:11] 2025-11-26 00:52:36,203 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-25 19:53:11] 2025-11-26 00:52:36,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:53:11] 2025-11-26 00:52:36,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:53:11] 2025-11-26 00:52:36,204 | INFO     | update_server=False
[2025-11-25 19:53:11] 2025-11-26 00:52:36,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:53:11] 2025-11-26 00:52:36,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:53:11] 2025-11-26 00:52:36,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:53:11] 2025-11-26 00:52:36,268 | INFO     | all data control threads have been joined
[2025-11-25 19:53:11] 2025-11-26 00:52:36,702 | INFO     | all job control threads have been joined
[2025-11-25 19:53:11] 2025-11-26 00:52:36,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:53:11] 2025-11-26 00:52:36,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:53:11] 2025-11-26 00:52:36,998 | INFO     | aborting loop
[2025-11-25 19:53:11] 2025-11-26 00:52:37,209 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,210 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,273 | INFO     | [data] control thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,370 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,410 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,645 | INFO     | all payload control threads have been joined
[2025-11-25 19:53:11] 2025-11-26 00:52:37,708 | INFO     | [job] control thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:37,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,003 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,299 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,355 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,434 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,632 | INFO     | [job] validate thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,645 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,650 | INFO     | [payload] control thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:38,932 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:52:40,210 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:53:11] 2025-11-26 00:53:04,710 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:53:11] 2025-11-26 00:53:06,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521110300480)>', '<ExcThread(monitor, started 140520290498304)>']
[2025-11-25 19:53:11] 2025-11-26 00:53:06,253 | INFO     | PID=19561 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 19:53:11] 2025-11-26 00:53:06,254 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:53:11] 2025-11-26 00:53:06,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:53:11] 2025-11-26 00:53:06,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:53:11] 2025-11-26 00:53:06,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:53:11] 2025-11-26 00:53:06,254 | INFO     | [monitor] control thread has ended
[2025-11-25 19:53:11] 2025-11-26 00:53:11,255 | INFO     | all workflow threads have been joined
[2025-11-25 19:53:11] 2025-11-26 00:53:11,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:53:11] 2025-11-26 00:53:11,256 | INFO     | traces error code: 0
[2025-11-25 19:53:11] 2025-11-26 00:53:11,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:53:11] 2025-11-26 00:53:11,368 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:53:11] 2025-11-26 00:53:11,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:53:11] 2025-11-26 00:53:11,376 [wrapper] pilotpid: 19561
[2025-11-25 19:53:11] 2025-11-26 00:53:11,379 [wrapper] Pilot exit status: 0
[2025-11-25 19:53:11] 2025-11-26 00:53:11,394 [wrapper] pandaids: 6896044955
[2025-11-25 19:53:11] 2025-11-26 00:53:11,434 [wrapper] cleanup supervisor_pilot 30272 19562
[2025-11-25 19:53:11] 2025-11-26 00:53:11,438 [wrapper] Test setup, not cleaning
[2025-11-25 19:53:11] 2025-11-26 00:53:11,442 [wrapper] apfmon messages muted
[2025-11-25 19:53:11] 2025-11-26 00:53:11,446 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:53:11] 2025-11-26 00:53:11,450 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:53:11]  *** Error codes and diagnostics ***
[2025-11-25 19:53:11]     "exeErrorCode": 0,
[2025-11-25 19:53:11]     "exeErrorDiag": "",
[2025-11-25 19:53:11]     "pilotErrorCode": 0,
[2025-11-25 19:53:11]     "pilotErrorDiag": "",
[2025-11-25 19:53:11]  *** Listing of results directory ***
[2025-11-25 19:53:11] total 1308032
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 13:41 queuedata.json
[2025-11-25 19:53:11] -rwx------ 1 boincer umatlas     36292 Nov 24 13:45 runpilot2-wrapper.sh
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas       100 Nov 25 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:53:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 12:48 run_atlas
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas       105 Nov 25 12:48 job.xml
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas 410126079 Nov 25 12:48 EVNT.47483658._003032.pool.root.1
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:48 start_atlas.sh
[2025-11-25 19:53:11] drwxrwx--x 2 boincer umatlas      4096 Nov 25 12:48 shared
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 12:48 input.tar.gz
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas         0 Nov 25 12:48 boinc_lockfile
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 12:48 pandaJob.out
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas        57 Nov 25 12:48 setup.sh.local
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas    991543 Nov 25 12:48 agis_schedconf.cvmfs.json
[2025-11-25 19:53:11] drwx------ 5 boincer umatlas      4096 Nov 25 12:48 pilot3
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas       532 Nov 25 19:43 boinc_task_state.xml
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 19:46 init_data.xml
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas 913889746 Nov 25 19:51 HITS.47556173._000145.pool.root.1
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas      1065 Nov 25 19:52 memory_monitor_summary.json
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas   1516240 Nov 25 19:52 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas   2180578 Nov 25 19:52 log.47556173._000145.job.log.tgz.1
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas        95 Nov 25 19:52 pilot_heartbeat.json
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas      8660 Nov 25 19:52 heartbeat.json
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 19:52 boinc_mmap_file
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas        29 Nov 25 19:52 wrapper_checkpoint.txt
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas      4746 Nov 25 19:53 pilotlog.txt
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas   3562362 Nov 25 19:53 log.47556173._000145.job.log.1
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas       353 Nov 25 19:53 output.list
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas       620 Nov 25 19:53 runtime_log
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas   5765120 Nov 25 19:53 result.tar.gz
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 19:53 runtime_log.err
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas       670 Nov 25 19:53 AIcLDmqjqh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpqLKDmRxUJ8n.diag
[2025-11-25 19:53:11] -rw-r--r-- 1 boincer umatlas     21317 Nov 25 19:53 stderr.txt
[2025-11-25 19:53:11] HITS file was successfully produced:
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas 913889746 Nov 25 19:51 shared/HITS.pool.root.1
[2025-11-25 19:53:11]  *** Contents of shared directory: ***
[2025-11-25 19:53:11] total 1299220
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas 410126079 Nov 25 12:48 ATLAS.root_0
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 12:48 start_atlas.sh
[2025-11-25 19:53:11] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 12:48 input.tar.gz
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas 913889746 Nov 25 19:51 HITS.pool.root.1
[2025-11-25 19:53:11] -rw------- 1 boincer umatlas   5765120 Nov 25 19:53 result.tar.gz
19:53:12 (15882): run_atlas exited; CPU time 285670.933378
19:53:12 (15882): called boinc_finish(0)

</stderr_txt>
]]>

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