Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:35:19 (1539859): wrapper (7.7.26015): starting
11:35:19 (1539859): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:35:19] Arguments: --nthreads 8
[2025-11-25 11:35:19] Threads: 8
[2025-11-25 11:35:19] Checking for CVMFS
[2025-11-25 11:35:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:35:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:35:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:35:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:35:22] 2.13.3.0 11226 27160 340212 153289 3 138 27055057 32935937 19201 16776704 0 62474331 99.489 85957846 40501 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 11:35:22] CVMFS is ok
[2025-11-25 11:35:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:35:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:35:22] Further information can be found at the LHC@home message board.
[2025-11-25 11:35:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:35:22] Checking for apptainer binary...
[2025-11-25 11:35:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:35:22] Running /usr/bin/apptainer --version
[2025-11-25 11:35:22] apptainer version 1.4.4-1.el9
[2025-11-25 11:35:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:35:23] c6-2-29-3.aglt2.org
[2025-11-25 11:35:23] apptainer works
[2025-11-25 11:35:23] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:35:23] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:35:23] Starting ATLAS job with PandaID=6896044044
[2025-11-25 11:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:05:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:05:53] 2025-11-26 05:04:44,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,351 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 00:05:53] 2025-11-26 05:04:46,355 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3033.3975000000005
[2025-11-26 00:05:53] 2025-11-26 05:04:46,376 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896044044/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,377 | INFO     | extracted standard info from prmon json
[2025-11-26 00:05:53] 2025-11-26 05:04:46,377 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:05:53] 2025-11-26 05:04:46,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:05:53] 2025-11-26 05:04:46,389 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:05:53] 2025-11-26 05:04:46,390 | INFO     | sum of square deviations: 122623247468.55725
[2025-11-26 00:05:53] 2025-11-26 05:04:46,411 | INFO     | sum of deviations: 1201465751334.4255
[2025-11-26 00:05:53] 2025-11-26 05:04:46,411 | INFO     | mean x: 1764111083.7833788
[2025-11-26 00:05:53] 2025-11-26 05:04:46,411 | INFO     | mean y: 2858187.788828338
[2025-11-26 00:05:53] 2025-11-26 05:04:46,412 | INFO     | intersect: -17281947854.056267
[2025-11-26 00:05:53] 2025-11-26 05:04:46,412 | INFO     | chi2: 15.102494300413406
[2025-11-26 00:05:53] 2025-11-26 05:04:46,413 | INFO     | sum of square deviations: 120134678802.76622
[2025-11-26 00:05:53] 2025-11-26 05:04:46,423 | INFO     | sum of deviations: 1447725629338.577
[2025-11-26 00:05:53] 2025-11-26 05:04:46,423 | INFO     | mean x: 1764110931.292181
[2025-11-26 00:05:53] 2025-11-26 05:04:46,423 | INFO     | mean y: 2873273.5747599453
[2025-11-26 00:05:53] 2025-11-26 05:04:46,423 | INFO     | intersect: -21256172271.642353
[2025-11-26 00:05:53] 2025-11-26 05:04:46,424 | INFO     | chi2: 11.826145891837085
[2025-11-26 00:05:53] 2025-11-26 05:04:46,424 | INFO     | current chi2=11.826145891837085 (change=21.6940880321116 %)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,424 | INFO     | right removable region: 728
[2025-11-26 00:05:53] 2025-11-26 05:04:46,425 | INFO     | sum of square deviations: 120134104182.76622
[2025-11-26 00:05:53] 2025-11-26 05:04:46,434 | INFO     | sum of deviations: 912847890771.2098
[2025-11-26 00:05:53] 2025-11-26 05:04:46,434 | INFO     | mean x: 1764111236.292181
[2025-11-26 00:05:53] 2025-11-26 05:04:46,435 | INFO     | mean y: 2875866.106995885
[2025-11-26 00:05:53] 2025-11-26 05:04:46,435 | INFO     | intersect: -13401854057.08931
[2025-11-26 00:05:53] 2025-11-26 05:04:46,435 | INFO     | chi2: 11.018939259074408
[2025-11-26 00:05:53] 2025-11-26 05:04:46,436 | INFO     | current chi2=11.018939259074408 (change=27.038944429379576 %)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,436 | INFO     | sum of square deviations: 117678868509.35893
[2025-11-26 00:05:53] 2025-11-26 05:04:46,450 | INFO     | sum of deviations: 667289609408.0774
[2025-11-26 00:05:53] 2025-11-26 05:04:46,450 | INFO     | mean x: 1764111388.801105
[2025-11-26 00:05:53] 2025-11-26 05:04:46,450 | INFO     | mean y: 2891109.1533149173
[2025-11-26 00:05:53] 2025-11-26 05:04:46,450 | INFO     | intersect: -10000376380.555855
[2025-11-26 00:05:53] 2025-11-26 05:04:46,451 | INFO     | chi2: 8.143896397378978
[2025-11-26 00:05:53] 2025-11-26 05:04:46,451 | INFO     | current chi2=8.143896397378978 (change=26.091829658900707 %)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,452 | INFO     | sum of square deviations: 115257528345.90251
[2025-11-26 00:05:53] 2025-11-26 05:04:46,474 | INFO     | sum of deviations: 586265034683.3777
[2025-11-26 00:05:53] 2025-11-26 05:04:46,474 | INFO     | mean x: 1764111541.3031988
[2025-11-26 00:05:53] 2025-11-26 05:04:46,474 | INFO     | mean y: 2896204.140472879
[2025-11-26 00:05:53] 2025-11-26 05:04:46,474 | INFO     | intersect: -8970373731.369425
[2025-11-26 00:05:53] 2025-11-26 05:04:46,475 | INFO     | chi2: 7.837218234027257
[2025-11-26 00:05:53] 2025-11-26 05:04:46,475 | INFO     | current chi2=7.837218234027257 (change=3.765742445476361 %)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,475 | INFO     | left removable region: 30
[2025-11-26 00:05:53] 2025-11-26 05:04:46,476 | INFO     | sum of square deviations: 105450846465.25473
[2025-11-26 00:05:53] 2025-11-26 05:04:46,497 | INFO     | sum of deviations: 770478431494.4926
[2025-11-26 00:05:53] 2025-11-26 05:04:46,498 | INFO     | mean x: 1764111815.8194842
[2025-11-26 00:05:53] 2025-11-26 05:04:46,498 | INFO     | mean y: 2923064.7578796563
[2025-11-26 00:05:53] 2025-11-26 05:04:46,498 | INFO     | intersect: -12886590394.779375
[2025-11-26 00:05:53] 2025-11-26 05:04:46,499 | INFO     | chi2: 3.5937345759023334
[2025-11-26 00:05:53] 2025-11-26 05:04:46,499 | INFO     | current memory leak: 7.31 B/s (using 698 data points, chi2=3.59)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | could have reported an average CPU frequency of 2964 MHz (28 samples)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | ..............................
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . Timing measurements:
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . get job = 0 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . initial setup = 4 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . payload setup = 43 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . stage-in = 0 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . payload execution = 44749 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,500 | INFO     | . stage-out = 6 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,501 | INFO     | . log creation = 1 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,501 | INFO     | ..............................
[2025-11-26 00:05:53] 2025-11-26 05:04:46,674 | INFO     | 
[2025-11-26 00:05:53] 2025-11-26 05:04:46,674 | INFO     | job summary report
[2025-11-26 00:05:53] 2025-11-26 05:04:46,674 | INFO     | --------------------------------------------------
[2025-11-26 00:05:53] 2025-11-26 05:04:46,674 | INFO     | PanDA job id: 6896044044
[2025-11-26 00:05:53] 2025-11-26 05:04:46,674 | INFO     | task id: 47556173
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | errors: (none)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | pilot state: finished 
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | transexitcode: 0
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | exeerrorcode: 0
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | exeerrordiag: 
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | exitcode: 0
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | exitmsg: OK
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | cpuconsumptiontime: 240128 s
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | nevents: 1000
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | neventsw: 0
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | pid: 1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | pgrp: 1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | corecount: 8
[2025-11-26 00:05:53] 2025-11-26 05:04:46,675 | INFO     | event service: False
[2025-11-26 00:05:53] 2025-11-26 05:04:46,676 | INFO     | sizes: {0: 2284084, 1: 2284168, 2: 2284367, 13: 2284367, 24: 2284423, 32: 2284713, 35: 2284869, 44796: 2331401, 44803: 2340395, 44804: 2340451, 44833: 2340697}
[2025-11-26 00:05:53] 2025-11-26 05:04:46,676 | INFO     | --------------------------------------------------
[2025-11-26 00:05:53] 2025-11-26 05:04:46,676 | INFO     | 
[2025-11-26 00:05:53] 2025-11-26 05:04:46,676 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 00:05:53] 2025-11-26 05:04:46,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:05:53] 2025-11-26 05:04:46,725 | INFO     | job 6896044044 has completed (purged errors)
[2025-11-26 00:05:53] 2025-11-26 05:04:46,725 | INFO     | overall cleanup function is called
[2025-11-26 00:05:53] 2025-11-26 05:04:47,753 | INFO     | --- collectZombieJob: --- 10, [1554634]
[2025-11-26 00:05:53] 2025-11-26 05:04:47,753 | INFO     | zombie collector waiting for pid 1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:47,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:05:53] 2025-11-26 05:04:47,753 | INFO     | collected zombie processes
[2025-11-26 00:05:53] 2025-11-26 05:04:47,753 | INFO     | will attempt to kill all subprocesses of pid=1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:48,520 | INFO     | process IDs to be killed: [1554634] (in reverse order)
[2025-11-26 00:05:53] 2025-11-26 05:04:48,922 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:05:53] 2025-11-26 05:04:48,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:05:53] 2025-11-26 05:04:48,971 | INFO     | did not find any defunct processes belonging to 1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:49,009 | INFO     | did not find any defunct processes belonging to 1554634
[2025-11-26 00:05:53] 2025-11-26 05:04:49,022 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:05:53] 2025-11-26 05:04:49,022 | INFO     | ready for new job
[2025-11-26 00:05:53] 2025-11-26 05:04:49,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:05:53] 2025-11-26 05:04:49,034 | INFO     | ***************************************
[2025-11-26 00:05:53] 2025-11-26 05:04:49,034 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:05:53] 2025-11-26 05:04:49,034 | INFO     | ***************************************
[2025-11-26 00:05:53] 2025-11-26 05:04:49,034 | INFO     | 
[2025-11-26 00:05:53] 2025-11-26 05:04:49,037 | INFO     | architecture information:
[2025-11-26 00:05:53] 2025-11-26 05:04:49,050 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:05:53] 2025-11-26 05:04:49,097 | INFO     | cat /etc/os-release:
[2025-11-26 00:05:53] NAME="CentOS Linux"
[2025-11-26 00:05:53] VERSION="7 (Core)"
[2025-11-26 00:05:53] ID="centos"
[2025-11-26 00:05:53] ID_LIKE="rhel fedora"
[2025-11-26 00:05:53] VERSION_ID="7"
[2025-11-26 00:05:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:05:53] ANSI_COLOR="0;31"
[2025-11-26 00:05:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:05:53] HOME_URL="https://www.centos.org/"
[2025-11-26 00:05:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:05:53] 
[2025-11-26 00:05:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:05:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:05:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:05:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:05:53] 
[2025-11-26 00:05:53] 2025-11-26 05:04:49,098 | INFO     | ***************************************
[2025-11-26 00:05:53] 2025-11-26 05:04:49,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 00:05:53] 2025-11-26 05:04:49,659 | INFO     | sufficient remaining disk space (70421315584 B)
[2025-11-26 00:05:53] 2025-11-26 05:04:49,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:05:53] 2025-11-26 05:04:49,660 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:05:53] 2025-11-26 05:04:49,660 | INFO     | update_server=False
[2025-11-26 00:05:53] 2025-11-26 05:04:49,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:05:53] 2025-11-26 05:04:49,877 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 00:05:53] 2025-11-26 05:04:49,883 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 00:05:53] 2025-11-26 05:04:49,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:05:53] 2025-11-26 05:04:49,883 | INFO     | will abort loop
[2025-11-26 00:05:53] 2025-11-26 05:04:50,122 | INFO     | all payload control threads have been joined
[2025-11-26 00:05:53] 2025-11-26 05:04:50,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:05:53] 2025-11-26 05:04:50,303 | INFO     | all data control threads have been joined
[2025-11-26 00:05:53] 2025-11-26 05:04:50,665 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:50,747 | INFO     | all job control threads have been joined
[2025-11-26 00:05:53] 2025-11-26 05:04:50,840 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:50,885 | INFO     | [job] validate thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:50,889 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,128 | INFO     | [payload] control thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,309 | INFO     | [data] control thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,460 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:05:53] 2025-11-26 05:04:51,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:05:53] 2025-11-26 05:04:51,752 | INFO     | [job] control thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,814 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,962 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:51,968 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:52,013 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:52,306 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:52,695 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:04:55,588 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:05:53] 2025-11-26 05:05:18,613 | INFO     | PID=1545549 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:05:53] 2025-11-26 05:05:18,614 | INFO     | .. there are 24 such processes running
[2025-11-26 00:05:53] 2025-11-26 05:05:18,614 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:05:53] 2025-11-26 05:05:18,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:05:53] 2025-11-26 05:05:18,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:05:53] 2025-11-26 05:05:45,376 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:05:53] 2025-11-26 05:05:46,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735155070784)>', '<ExcThread(monitor, started 139734647027456)>']
[2025-11-26 00:05:53] 2025-11-26 05:05:47,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:05:53] 2025-11-26 05:05:47,823 | INFO     | [monitor] control thread has ended
[2025-11-26 00:05:53] 2025-11-26 05:05:52,006 | INFO     | all workflow threads have been joined
[2025-11-26 00:05:53] 2025-11-26 05:05:52,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:05:53] 2025-11-26 05:05:52,006 | INFO     | traces error code: 0
[2025-11-26 00:05:53] 2025-11-26 05:05:52,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:05:53] 2025-11-26 05:05:52,534 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:05:53] 2025-11-26 05:05:52,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:05:53] 2025-11-26 05:05:52,563 [wrapper] pilotpid: 1545549
[2025-11-26 00:05:53] 2025-11-26 05:05:52,589 [wrapper] Pilot exit status: 0
[2025-11-26 00:05:53] 2025-11-26 05:05:52,702 [wrapper] pandaids: 6896044044
[2025-11-26 00:05:53] 2025-11-26 05:05:52,862 [wrapper] cleanup supervisor_pilot 3729496 1545550
[2025-11-26 00:05:53] 2025-11-26 05:05:52,873 [wrapper] Test setup, not cleaning
[2025-11-26 00:05:53] 2025-11-26 05:05:52,892 [wrapper] apfmon messages muted
[2025-11-26 00:05:53] 2025-11-26 05:05:52,910 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:05:53] 2025-11-26 05:05:52,929 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:05:53]  *** Error codes and diagnostics ***
[2025-11-26 00:05:53]     "exeErrorCode": 0,
[2025-11-26 00:05:53]     "exeErrorDiag": "",
[2025-11-26 00:05:53]     "pilotErrorCode": 0,
[2025-11-26 00:05:53]     "pilotErrorDiag": "",
[2025-11-26 00:05:53]  *** Listing of results directory ***
[2025-11-26 00:05:53] total 1318284
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:43 queuedata.json
[2025-11-26 00:05:53] -rwx------. 1 boincer umatlas     36292 Nov 24 12:44 runpilot2-wrapper.sh
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas       100 Nov 25 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:05:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 11:35 run_atlas
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas       105 Nov 25 11:35 job.xml
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas 411805055 Nov 25 11:35 EVNT.47483658._003021.pool.root.1
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:35 start_atlas.sh
[2025-11-26 00:05:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 11:35 shared
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 11:35 input.tar.gz
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas         0 Nov 25 11:35 boinc_lockfile
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 11:35 pandaJob.out
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas        57 Nov 25 11:35 setup.sh.local
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas    991543 Nov 25 11:36 agis_schedconf.cvmfs.json
[2025-11-26 00:05:53] drwx------. 5 boincer umatlas      4096 Nov 25 11:36 pilot3
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:48 boinc_task_state.xml
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 00:00 init_data.xml
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas 918152054 Nov 26 00:03 HITS.47556173._000038.pool.root.1
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas      1056 Nov 26 00:04 memory_monitor_summary.json
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas   1516240 Nov 26 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas   1982116 Nov 26 00:04 log.47556173._000038.job.log.tgz.1
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas      8631 Nov 26 00:04 heartbeat.json
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas        95 Nov 26 00:05 pilot_heartbeat.json
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas        29 Nov 26 00:05 wrapper_checkpoint.txt
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 00:05 boinc_mmap_file
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas      5010 Nov 26 00:05 pilotlog.txt
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas   6040681 Nov 26 00:05 log.47556173._000038.job.log.1
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas       353 Nov 26 00:05 output.list
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas       620 Nov 26 00:05 runtime_log
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas   8038400 Nov 26 00:05 result.tar.gz
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 00:05 runtime_log.err
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas       661 Nov 26 00:05 Cq8MDmFnph8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE9IKDmUTl1Um.diag
[2025-11-26 00:05:53] -rw-r--r--. 1 boincer umatlas     21374 Nov 26 00:05 stderr.txt
[2025-11-26 00:05:53] HITS file was successfully produced:
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas 918152054 Nov 26 00:03 shared/HITS.pool.root.1
[2025-11-26 00:05:53]  *** Contents of shared directory: ***
[2025-11-26 00:05:53] total 1307248
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas 411805055 Nov 25 11:35 ATLAS.root_0
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:35 start_atlas.sh
[2025-11-26 00:05:53] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 11:35 input.tar.gz
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas 918152054 Nov 26 00:03 HITS.pool.root.1
[2025-11-26 00:05:53] -rw-------. 1 boincer umatlas   8038400 Nov 26 00:05 result.tar.gz
00:05:54 (1539859): run_atlas exited; CPU time 241010.182762
00:05:54 (1539859): called boinc_finish(0)

</stderr_txt>
]]>

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