Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:16 (30911): wrapper (7.7.26015): starting
11:42:16 (30911): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:42:16] Arguments: --nthreads 8
[2025-11-25 11:42:16] Threads: 8
[2025-11-25 11:42:16] Checking for CVMFS
[2025-11-25 11:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:42:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:42:16] 2.11.2.0 2830 53283 84452 153289 1 81 16890596 20275200 1 130560 0 11056899 99.777 3266227 28136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:42:16] CVMFS is ok
[2025-11-25 11:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:42:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:42:16] Further information can be found at the LHC@home message board.
[2025-11-25 11:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:42:16] Checking for apptainer binary...
[2025-11-25 11:42:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:42:16] Running /usr/bin/apptainer --version
[2025-11-25 11:42:16] apptainer version 1.3.2-1.el7
[2025-11-25 11:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:42:18] c-204-14.aglt2.org
[2025-11-25 11:42:18] apptainer works
[2025-11-25 11:42:18] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:42:18] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:42:18] Starting ATLAS job with PandaID=6896044926
[2025-11-25 11:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:29:08 (19386): wrapper (7.7.26015): starting
21:29:08 (19386): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:29:08] Arguments: --nthreads 8
[2025-11-25 21:29:08] Threads: 8
[2025-11-25 21:29:08] This job has been restarted, cleaning up previous attempt
[2025-11-25 21:29:08] Checking for CVMFS
[2025-11-25 21:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:29:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:29:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:29:09] 2.11.2.0 2830 53869 89592 153305 3 49 17638241 20275201 1 130560 0 11251431 99.780 3290146 28191 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 21:29:09] CVMFS is ok
[2025-11-25 21:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:29:09] Further information can be found at the LHC@home message board.
[2025-11-25 21:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:29:09] Checking for apptainer binary...
[2025-11-25 21:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:29:09] Running /usr/bin/apptainer --version
[2025-11-25 21:29:09] apptainer version 1.3.2-1.el7
[2025-11-25 21:29:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:29:11] c-204-14.aglt2.org
[2025-11-25 21:29:11] apptainer works
[2025-11-25 21:29:11] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:29:11] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:29:11] Starting ATLAS job with PandaID=6896044926
[2025-11-25 21:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:48:44 (15800): wrapper (7.7.26015): starting
21:48:44 (15800): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:48:44] Arguments: --nthreads 8
[2025-11-25 21:48:44] Threads: 8
[2025-11-25 21:48:44] This job has been restarted, cleaning up previous attempt
[2025-11-25 21:48:44] Checking for CVMFS
[2025-11-25 21:48:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:48:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:48:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:48:45] 2.11.2.0 2830 53889 87696 153305 3 90 17664733 20275200 1 130560 0 11316840 99.781 3290228 28190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 21:48:45] CVMFS is ok
[2025-11-25 21:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:48:45] Further information can be found at the LHC@home message board.
[2025-11-25 21:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:48:45] Checking for apptainer binary...
[2025-11-25 21:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:48:45] Running /usr/bin/apptainer --version
[2025-11-25 21:48:45] apptainer version 1.3.2-1.el7
[2025-11-25 21:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:48:46] c-204-14.aglt2.org
[2025-11-25 21:48:46] apptainer works
[2025-11-25 21:48:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:48:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:48:46] Starting ATLAS job with PandaID=6896044926
[2025-11-25 21:48:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:03:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:03:21] 2025-11-26 15:02:29,029 | INFO     | time since job start (44006s) is within the limit (172800.0s)
[2025-11-26 10:03:21] 2025-11-26 15:02:30,309 | INFO     | monitor loop #3229: job 0:6896044926 is in state 'finished'
[2025-11-26 10:03:21] 2025-11-26 15:02:30,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:03:21] 2025-11-26 15:02:31,035 | INFO     | time since job start (44008s) is within the limit (172800.0s)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,299 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 10:03:21] 2025-11-26 15:02:32,302 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-26 10:03:21] 2025-11-26 15:02:32,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896044926/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,305 | INFO     | extracted standard info from prmon json
[2025-11-26 10:03:21] 2025-11-26 15:02:32,305 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:03:21] 2025-11-26 15:02:32,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:03:21] 2025-11-26 15:02:32,317 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:03:21] 2025-11-26 15:02:32,318 | INFO     | sum of square deviations: 116221071470.5188
[2025-11-26 10:03:21] 2025-11-26 15:02:32,329 | INFO     | sum of deviations: 842148519024.2998
[2025-11-26 10:03:21] 2025-11-26 15:02:32,329 | INFO     | mean x: 1764147336.6380029
[2025-11-26 10:03:21] 2025-11-26 15:02:32,329 | INFO     | mean y: 3259132.2080443827
[2025-11-26 10:03:21] 2025-11-26 15:02:32,329 | INFO     | intersect: -12779913902.5305
[2025-11-26 10:03:21] 2025-11-26 15:02:32,330 | INFO     | chi2: 5.835558134362325
[2025-11-26 10:03:21] 2025-11-26 15:02:32,331 | INFO     | sum of square deviations: 113820031863.46921
[2025-11-26 10:03:21] 2025-11-26 15:02:32,341 | INFO     | sum of deviations: 1099749748121.2192
[2025-11-26 10:03:21] 2025-11-26 15:02:32,341 | INFO     | mean x: 1764147184.1424582
[2025-11-26 10:03:21] 2025-11-26 15:02:32,342 | INFO     | mean y: 3275487.2625698326
[2025-11-26 10:03:21] 2025-11-26 15:02:32,342 | INFO     | intersect: -17042233898.437334
[2025-11-26 10:03:21] 2025-11-26 15:02:32,342 | INFO     | chi2: 3.005644220667484
[2025-11-26 10:03:21] 2025-11-26 15:02:32,343 | INFO     | current chi2=3.005644220667484 (change=48.49431448606547 %)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,343 | INFO     | sum of square deviations: 111452295206.39078
[2025-11-26 10:03:21] 2025-11-26 15:02:32,360 | INFO     | sum of deviations: 1174546264748.9858
[2025-11-26 10:03:21] 2025-11-26 15:02:32,360 | INFO     | mean x: 1764147031.646976
[2025-11-26 10:03:21] 2025-11-26 15:02:32,360 | INFO     | mean y: 3280294.7609001407
[2025-11-26 10:03:21] 2025-11-26 15:02:32,361 | INFO     | intersect: -18588282154.91176
[2025-11-26 10:03:21] 2025-11-26 15:02:32,361 | INFO     | chi2: 2.6231866402134494
[2025-11-26 10:03:21] 2025-11-26 15:02:32,362 | INFO     | current chi2=2.6231866402134494 (change=12.72464577890392 %)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,362 | INFO     | right removable region: 710
[2025-11-26 10:03:21] 2025-11-26 15:02:32,362 | INFO     | sum of square deviations: 113819751263.4693
[2025-11-26 10:03:21] 2025-11-26 15:02:32,373 | INFO     | sum of deviations: 610087701619.2573
[2025-11-26 10:03:21] 2025-11-26 15:02:32,373 | INFO     | mean x: 1764147489.1424582
[2025-11-26 10:03:21] 2025-11-26 15:02:32,373 | INFO     | mean y: 3273844.899441341
[2025-11-26 10:03:21] 2025-11-26 15:02:32,373 | INFO     | intersect: -9452771129.903997
[2025-11-26 10:03:21] 2025-11-26 15:02:32,374 | INFO     | chi2: 3.389572616945919
[2025-11-26 10:03:21] 2025-11-26 15:02:32,374 | INFO     | current chi2=3.389572616945919 (change=41.91519407566811 %)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,375 | INFO     | sum of square deviations: 111451777804.68367
[2025-11-26 10:03:21] 2025-11-26 15:02:32,385 | INFO     | sum of deviations: 564562306335.4685
[2025-11-26 10:03:21] 2025-11-26 15:02:32,385 | INFO     | mean x: 1764147641.6455696
[2025-11-26 10:03:21] 2025-11-26 15:02:32,385 | INFO     | mean y: 3276775.053445851
[2025-11-26 10:03:21] 2025-11-26 15:02:32,385 | INFO     | intersect: -8933065748.159723
[2025-11-26 10:03:21] 2025-11-26 15:02:32,386 | INFO     | chi2: 3.3494782970631523
[2025-11-26 10:03:21] 2025-11-26 15:02:32,386 | INFO     | current chi2=3.3494782970631523 (change=1.1828724271112585 %)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,386 | INFO     | left removable region: 20
[2025-11-26 10:03:21] 2025-11-26 15:02:32,387 | INFO     | sum of square deviations: 101865312641.09558
[2025-11-26 10:03:21] 2025-11-26 15:02:32,397 | INFO     | sum of deviations: 828387785840.4783
[2025-11-26 10:03:21] 2025-11-26 15:02:32,397 | INFO     | mean x: 1764147611.1565218
[2025-11-26 10:03:21] 2025-11-26 15:02:32,397 | INFO     | mean y: 3302731.782608696
[2025-11-26 10:03:21] 2025-11-26 15:02:32,397 | INFO     | intersect: -14343075791.107698
[2025-11-26 10:03:21] 2025-11-26 15:02:32,398 | INFO     | chi2: 0.09110623204615738
[2025-11-26 10:03:21] 2025-11-26 15:02:32,398 | INFO     | current memory leak: 8.13 B/s (using 690 data points, chi2=0.09)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | could have reported an average CPU frequency of 2154 MHz (28 samples)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | ..............................
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | . Timing measurements:
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | . get job = 0 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | . initial setup = 1 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | . payload setup = 9 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,399 | INFO     | . stage-in = 0 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,400 | INFO     | . payload execution = 43968 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,400 | INFO     | . stage-out = 4 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,400 | INFO     | . log creation = 0 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,400 | INFO     | ..............................
[2025-11-26 10:03:21] 2025-11-26 15:02:32,489 | INFO     | 
[2025-11-26 10:03:21] 2025-11-26 15:02:32,489 | INFO     | job summary report
[2025-11-26 10:03:21] 2025-11-26 15:02:32,489 | INFO     | --------------------------------------------------
[2025-11-26 10:03:21] 2025-11-26 15:02:32,489 | INFO     | PanDA job id: 6896044926
[2025-11-26 10:03:21] 2025-11-26 15:02:32,489 | INFO     | task id: 47556173
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | errors: (none)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | pilot state: finished 
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | transexitcode: 0
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | exeerrorcode: 0
[2025-11-26 10:03:21] 2025-11-26 15:02:32,490 | INFO     | exeerrordiag: 
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | exitcode: 0
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | exitmsg: OK
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | cpuconsumptiontime: 341615 s
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | nevents: 1000
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | neventsw: 0
[2025-11-26 10:03:21] 2025-11-26 15:02:32,491 | INFO     | pid: 26321
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | pgrp: 26321
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | corecount: 8
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | event service: False
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | sizes: {0: 2284142, 1: 2284341, 7: 2284603, 11: 2284631, 43981: 2330220, 43986: 2339426, 43992: 2339616}
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | --------------------------------------------------
[2025-11-26 10:03:21] 2025-11-26 15:02:32,492 | INFO     | 
[2025-11-26 10:03:21] 2025-11-26 15:02:32,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 10:03:21] 2025-11-26 15:02:32,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:03:21] 2025-11-26 15:02:32,524 | INFO     | job 6896044926 has completed (purged errors)
[2025-11-26 10:03:21] 2025-11-26 15:02:32,524 | INFO     | overall cleanup function is called
[2025-11-26 10:03:21] 2025-11-26 15:02:33,540 | INFO     | --- collectZombieJob: --- 10, [26321]
[2025-11-26 10:03:21] 2025-11-26 15:02:33,540 | INFO     | zombie collector waiting for pid 26321
[2025-11-26 10:03:21] 2025-11-26 15:02:33,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:03:21] 2025-11-26 15:02:33,540 | INFO     | collected zombie processes
[2025-11-26 10:03:21] 2025-11-26 15:02:33,540 | INFO     | will attempt to kill all subprocesses of pid=26321
[2025-11-26 10:03:21] 2025-11-26 15:02:33,631 | INFO     | process IDs to be killed: [26321] (in reverse order)
[2025-11-26 10:03:21] 2025-11-26 15:02:33,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:03:21] 2025-11-26 15:02:33,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:03:21] 2025-11-26 15:02:33,695 | INFO     | did not find any defunct processes belonging to 26321
[2025-11-26 10:03:21] 2025-11-26 15:02:33,697 | INFO     | did not find any defunct processes belonging to 26321
[2025-11-26 10:03:21] 2025-11-26 15:02:33,700 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:03:21] 2025-11-26 15:02:33,700 | INFO     | ready for new job
[2025-11-26 10:03:21] 2025-11-26 15:02:33,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:03:21] 2025-11-26 15:02:33,704 | INFO     | ***************************************
[2025-11-26 10:03:21] 2025-11-26 15:02:33,704 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:03:21] 2025-11-26 15:02:33,704 | INFO     | ***************************************
[2025-11-26 10:03:21] 2025-11-26 15:02:33,704 | INFO     | 
[2025-11-26 10:03:21] 2025-11-26 15:02:33,704 | INFO     | architecture information:
[2025-11-26 10:03:21] 2025-11-26 15:02:33,705 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:03:21] 2025-11-26 15:02:33,725 | INFO     | cat /etc/os-release:
[2025-11-26 10:03:21] NAME="CentOS Linux"
[2025-11-26 10:03:21] VERSION="7 (Core)"
[2025-11-26 10:03:21] ID="centos"
[2025-11-26 10:03:21] ID_LIKE="rhel fedora"
[2025-11-26 10:03:21] VERSION_ID="7"
[2025-11-26 10:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:03:21] ANSI_COLOR="0;31"
[2025-11-26 10:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:03:21] HOME_URL="https://www.centos.org/"
[2025-11-26 10:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:03:21] 
[2025-11-26 10:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:03:21] 
[2025-11-26 10:03:21] 2025-11-26 15:02:33,726 | INFO     | ***************************************
[2025-11-26 10:03:21] 2025-11-26 15:02:34,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 10:03:21] 2025-11-26 15:02:34,251 | INFO     | sufficient remaining disk space (17486053376 B)
[2025-11-26 10:03:21] 2025-11-26 15:02:34,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:03:21] 2025-11-26 15:02:34,252 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:03:21] 2025-11-26 15:02:34,252 | INFO     | update_server=False
[2025-11-26 10:03:21] 2025-11-26 15:02:34,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:03:21] 2025-11-26 15:02:34,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:03:21] 2025-11-26 15:02:34,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:03:21] 2025-11-26 15:02:34,253 | INFO     | aborting loop
[2025-11-26 10:03:21] 2025-11-26 15:02:34,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:03:21] 2025-11-26 15:02:34,751 | INFO     | all data control threads have been joined
[2025-11-26 10:03:21] 2025-11-26 15:02:34,949 | INFO     | all job control threads have been joined
[2025-11-26 10:03:21] 2025-11-26 15:02:34,965 | INFO     | all payload control threads have been joined
[2025-11-26 10:03:21] 2025-11-26 15:02:35,258 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,259 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,260 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,747 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,759 | INFO     | [data] control thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,954 | INFO     | [job] control thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:35,970 | INFO     | [payload] control thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,106 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,301 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,307 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,366 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,431 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,659 | INFO     | [job] validate thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,708 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:36,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:02:37,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:03:21] 2025-11-26 15:02:41,018 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:03:21] 2025-11-26 15:03:04,240 | INFO     | PID=19907 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 10:03:21] 2025-11-26 15:03:04,240 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:03:21] 2025-11-26 15:03:04,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:03:21] 2025-11-26 15:03:04,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:03:21] 2025-11-26 15:03:16,417 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:03:21] 2025-11-26 15:03:16,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531794302784)>', '<ExcThread(monitor, started 140530918876928)>']
[2025-11-26 10:03:21] 2025-11-26 15:03:17,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:03:21] 2025-11-26 15:03:17,302 | INFO     | [monitor] control thread has ended
[2025-11-26 10:03:21] 2025-11-26 15:03:21,463 | INFO     | all workflow threads have been joined
[2025-11-26 10:03:21] 2025-11-26 15:03:21,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:03:21] 2025-11-26 15:03:21,464 | INFO     | traces error code: 0
[2025-11-26 10:03:21] 2025-11-26 15:03:21,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:03:21] 2025-11-26 15:03:21,582 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:03:21] 2025-11-26 15:03:21,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:03:21] 2025-11-26 15:03:21,592 [wrapper] pilotpid: 19907
[2025-11-26 10:03:21] 2025-11-26 15:03:21,596 [wrapper] Pilot exit status: 0
[2025-11-26 10:03:21] 2025-11-26 15:03:21,613 [wrapper] pandaids: 6896044926 6896044926 6896044926
[2025-11-26 10:03:21] 2025-11-26 15:03:21,669 [wrapper] cleanup supervisor_pilot 21396 19908
[2025-11-26 10:03:21] 2025-11-26 15:03:21,674 [wrapper] Test setup, not cleaning
[2025-11-26 10:03:21] 2025-11-26 15:03:21,679 [wrapper] apfmon messages muted
[2025-11-26 10:03:21] 2025-11-26 15:03:21,684 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:03:21] 2025-11-26 15:03:21,689 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:03:21]  *** Error codes and diagnostics ***
[2025-11-26 10:03:21]     "exeErrorCode": 0,
[2025-11-26 10:03:21]     "exeErrorDiag": "",
[2025-11-26 10:03:21]     "pilotErrorCode": 0,
[2025-11-26 10:03:21]     "pilotErrorDiag": "",
[2025-11-26 10:03:21]  *** Listing of results directory ***
[2025-11-26 10:03:21] total 1701824
[2025-11-26 10:03:21] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 13:31 queuedata.json
[2025-11-26 10:03:21] -rwx------ 1 boincer umatlas     36292 Nov 24 13:35 runpilot2-wrapper.sh
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas       100 Nov 25 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:03:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 11:42 run_atlas
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas       105 Nov 25 11:42 job.xml
[2025-11-26 10:03:21] -rw-r--r-- 3 boincer umatlas 408188450 Nov 25 11:42 EVNT.47483658._003029.pool.root.1
[2025-11-26 10:03:21] -rw-r--r-- 3 boincer umatlas 408188450 Nov 25 11:42 ATLAS.root_0
[2025-11-26 10:03:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:42 start_atlas.sh
[2025-11-26 10:03:21] drwxrwx--x 2 boincer umatlas      4096 Nov 25 11:42 shared
[2025-11-26 10:03:21] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 11:42 input.tar.gz
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas         0 Nov 25 11:42 boinc_lockfile
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 21:48 pandaJob.out
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas        57 Nov 25 21:48 setup.sh.local
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas    991877 Nov 25 21:49 agis_schedconf.cvmfs.json
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas       533 Nov 26 09:51 boinc_task_state.xml
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas 906307861 Nov 26 10:01 HITS.47556173._000116.pool.root.1
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas        96 Nov 26 10:02 pilot_heartbeat.json
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas      1061 Nov 26 10:02 memory_monitor_summary.json
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas   1516240 Nov 26 10:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas   1971494 Nov 26 10:02 log.47556173._000116.job.log.tgz.1
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas      8672 Nov 26 10:02 heartbeat.json
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 10:02 init_data.xml
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 10:02 boinc_mmap_file
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas        29 Nov 26 10:02 wrapper_checkpoint.txt
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas      4746 Nov 26 10:03 pilotlog.txt
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas   6054702 Nov 26 10:03 log.47556173._000116.job.log.1
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas       353 Nov 26 10:03 output.list
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas       620 Nov 26 10:03 runtime_log
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas   8048640 Nov 26 10:03 result.tar.gz
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas       918 Nov 26 10:03 Z9PNDmQaqh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEqLKDm3LsMom.diag
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas      9428 Nov 26 10:03 runtime_log.err
[2025-11-26 10:03:21] -rw-r--r-- 1 boincer umatlas     25599 Nov 26 10:03 stderr.txt
[2025-11-26 10:03:21] HITS file was successfully produced:
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas 906307861 Nov 26 10:01 shared/HITS.pool.root.1
[2025-11-26 10:03:21]  *** Contents of shared directory: ***
[2025-11-26 10:03:21] total 1292152
[2025-11-26 10:03:21] -rw-r--r-- 3 boincer umatlas 408188450 Nov 25 11:42 ATLAS.root_0
[2025-11-26 10:03:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:42 start_atlas.sh
[2025-11-26 10:03:21] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 11:42 input.tar.gz
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas 906307861 Nov 26 10:01 HITS.pool.root.1
[2025-11-26 10:03:21] -rw------- 1 boincer umatlas   8048640 Nov 26 10:03 result.tar.gz
10:03:23 (15800): run_atlas exited; CPU time 339260.612743
10:03:23 (15800): called boinc_finish(0)

</stderr_txt>
]]>

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