Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:07 (2013755): wrapper (7.7.26015): starting
07:29:07 (2013755): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 07:29:07] Arguments: --nthreads 12
[2025-11-27 07:29:07] Threads: 12
[2025-11-27 07:29:07] Checking for CVMFS
[2025-11-27 07:29:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:29:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:29:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:29:07] 2.13.3.0 10248 28288 92524 153350 0 90 39237939 46080000 1695 130560 1 14017117 99.934 1469063 2100 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-27 07:29:07] CVMFS is ok
[2025-11-27 07:29:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 07:29:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 07:29:07] Further information can be found at the LHC@home message board.
[2025-11-27 07:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:29:07] Checking for apptainer binary...
[2025-11-27 07:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:29:07] Running /usr/bin/apptainer --version
[2025-11-27 07:29:07] apptainer version 1.4.3-1.el9
[2025-11-27 07:29:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:29:07] gpu01.farm.particle.cz
[2025-11-27 07:29:07] apptainer works
[2025-11-27 07:29:07] Set ATHENA_PROC_NUMBER=12
[2025-11-27 07:29:07] Set ATHENA_CORE_NUMBER=12
[2025-11-27 07:29:07] Starting ATLAS job with PandaID=6895367388
[2025-11-27 07:29:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:29:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:29:41] 2025-11-27 10:29:00,403 | INFO     | number of running child processes to parent process 2024640: 1
[2025-11-27 11:29:41] 2025-11-27 10:29:00,403 | INFO     | maximum number of monitored processes: 17
[2025-11-27 11:29:41] 2025-11-27 10:29:01,225 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 11:29:41] 2025-11-27 10:29:01,229 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3241.5949687499997
[2025-11-27 11:29:41] 2025-11-27 10:29:01,235 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895367388/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,235 | INFO     | extracted standard info from prmon json
[2025-11-27 11:29:41] 2025-11-27 10:29:01,235 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:29:41] 2025-11-27 10:29:01,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:29:41] 2025-11-27 10:29:01,239 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:29:41] 2025-11-27 10:29:01,239 | INFO     | sum of square deviations: 4075632725.9152527
[2025-11-27 11:29:41] 2025-11-27 10:29:01,240 | INFO     | sum of deviations: 122638561528.08464
[2025-11-27 11:29:41] 2025-11-27 10:29:01,240 | INFO     | mean x: 1764232143.4322033
[2025-11-27 11:29:41] 2025-11-27 10:29:01,241 | INFO     | mean y: 3488812.0677966103
[2025-11-27 11:29:41] 2025-11-27 10:29:01,241 | INFO     | intersect: -53083456656.88315
[2025-11-27 11:29:41] 2025-11-27 10:29:01,241 | INFO     | chi2: 3.64761060547549
[2025-11-27 11:29:41] 2025-11-27 10:29:01,241 | INFO     | sum of square deviations: 3822080915.376622
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | sum of deviations: 186114785789.06497
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | mean x: 1764231990.948052
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | mean y: 3526683.5887445887
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | intersect: -85905083402.74617
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | chi2: 1.6494123046837994
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | current chi2=1.6494123046837994 (change=54.78102015034613 %)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,242 | INFO     | sum of square deviations: 3579258792.141609
[2025-11-27 11:29:41] 2025-11-27 10:29:01,243 | INFO     | sum of deviations: 178341234374.0001
[2025-11-27 11:29:41] 2025-11-27 10:29:01,243 | INFO     | mean x: 1764231838.460177
[2025-11-27 11:29:41] 2025-11-27 10:29:01,243 | INFO     | mean y: 3521799.5
[2025-11-27 11:29:41] 2025-11-27 10:29:01,243 | INFO     | intersect: -87901628977.44089
[2025-11-27 11:29:41] 2025-11-27 10:29:01,244 | INFO     | chi2: 1.6478157985429054
[2025-11-27 11:29:41] 2025-11-27 10:29:01,244 | INFO     | current chi2=1.6478157985429054 (change=0.09679242335954771 %)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,244 | INFO     | right removable region: 225
[2025-11-27 11:29:41] 2025-11-27 10:29:01,244 | INFO     | sum of square deviations: 3822003691.151513
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | sum of deviations: 63430539075.2121
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | mean x: 1764232295.939394
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | mean y: 3524136.229437229
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | intersect: -29275936227.561893
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | chi2: 2.069730572921264
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | current chi2=2.069730572921264 (change=43.2579077982075 %)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,245 | INFO     | sum of square deviations: 3579147593.632742
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | sum of deviations: 49720451005.66817
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | mean x: 1764232448.4380531
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | mean y: 3532730.1548672565
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | intersect: -24504658318.245647
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | chi2: 2.0470741591573427
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | current chi2=2.0470741591573427 (change=1.0946552203625028 %)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,246 | INFO     | left removable region: 20
[2025-11-27 11:29:41] 2025-11-27 10:29:01,247 | INFO     | sum of square deviations: 2671318837.8243876
[2025-11-27 11:29:41] 2025-11-27 10:29:01,247 | INFO     | sum of deviations: 86146041381.4195
[2025-11-27 11:29:41] 2025-11-27 10:29:01,247 | INFO     | mean x: 1764232417.9707317
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | mean y: 3582415.736585366
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | intersect: -56890277176.37688
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | chi2: 0.009966483509045668
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | current memory leak: 32.25 B/s (using 205 data points, chi2=0.01)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | could have reported an average CPU frequency of 3200 MHz (11 samples)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | ..............................
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . Timing measurements:
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . get job = 0 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . initial setup = 2 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . payload setup = 3 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . stage-in = 0 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . payload execution = 14357 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . stage-out = 3 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | . log creation = 0 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,248 | INFO     | ..............................
[2025-11-27 11:29:41] 2025-11-27 10:29:01,300 | INFO     | 
[2025-11-27 11:29:41] 2025-11-27 10:29:01,300 | INFO     | job summary report
[2025-11-27 11:29:41] 2025-11-27 10:29:01,300 | INFO     | --------------------------------------------------
[2025-11-27 11:29:41] 2025-11-27 10:29:01,300 | INFO     | PanDA job id: 6895367388
[2025-11-27 11:29:41] 2025-11-27 10:29:01,300 | INFO     | task id: 47556137
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | errors: (none)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | pilot state: finished 
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | transexitcode: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | exeerrorcode: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | exeerrordiag: 
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | exitcode: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | exitmsg: OK
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | cpuconsumptiontime: 168200 s
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | nevents: 1000
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | neventsw: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | pid: 2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | pgrp: 2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | corecount: 12
[2025-11-27 11:29:41] 2025-11-27 10:29:01,301 | INFO     | event service: False
[2025-11-27 11:29:41] 2025-11-27 10:29:01,302 | INFO     | sizes: {0: 2284144, 1: 2284343, 3: 2284605, 11: 2284633, 14364: 2316487, 14368: 2325481, 14369: 2325665, 14372: 2325911}
[2025-11-27 11:29:41] 2025-11-27 10:29:01,302 | INFO     | --------------------------------------------------
[2025-11-27 11:29:41] 2025-11-27 10:29:01,302 | INFO     | 
[2025-11-27 11:29:41] 2025-11-27 10:29:01,302 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 11:29:41] 2025-11-27 10:29:01,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:29:41] 2025-11-27 10:29:01,320 | INFO     | job 6895367388 has completed (purged errors)
[2025-11-27 11:29:41] 2025-11-27 10:29:01,320 | INFO     | overall cleanup function is called
[2025-11-27 11:29:41] 2025-11-27 10:29:02,339 | INFO     | --- collectZombieJob: --- 10, [2024640]
[2025-11-27 11:29:41] 2025-11-27 10:29:02,339 | INFO     | zombie collector waiting for pid 2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:02,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:29:41] 2025-11-27 10:29:02,340 | INFO     | collected zombie processes
[2025-11-27 11:29:41] 2025-11-27 10:29:02,340 | INFO     | will attempt to kill all subprocesses of pid=2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:02,430 | INFO     | process IDs to be killed: [2024640] (in reverse order)
[2025-11-27 11:29:41] 2025-11-27 10:29:02,470 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:29:41] 2025-11-27 10:29:02,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:29:41] 2025-11-27 10:29:02,474 | INFO     | did not find any defunct processes belonging to 2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:02,477 | INFO     | did not find any defunct processes belonging to 2024640
[2025-11-27 11:29:41] 2025-11-27 10:29:02,478 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:29:41] 2025-11-27 10:29:02,478 | INFO     | ready for new job
[2025-11-27 11:29:41] 2025-11-27 10:29:02,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:29:41] 2025-11-27 10:29:02,479 | INFO     | ***************************************
[2025-11-27 11:29:41] 2025-11-27 10:29:02,479 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:29:41] 2025-11-27 10:29:02,480 | INFO     | ***************************************
[2025-11-27 11:29:41] 2025-11-27 10:29:02,480 | INFO     | 
[2025-11-27 11:29:41] 2025-11-27 10:29:02,481 | INFO     | architecture information:
[2025-11-27 11:29:41] 2025-11-27 10:29:02,481 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:29:41] 2025-11-27 10:29:02,492 | INFO     | cat /etc/os-release:
[2025-11-27 11:29:41] NAME="CentOS Linux"
[2025-11-27 11:29:41] VERSION="7 (Core)"
[2025-11-27 11:29:41] ID="centos"
[2025-11-27 11:29:41] ID_LIKE="rhel fedora"
[2025-11-27 11:29:41] VERSION_ID="7"
[2025-11-27 11:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:29:41] ANSI_COLOR="0;31"
[2025-11-27 11:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:29:41] HOME_URL="https://www.centos.org/"
[2025-11-27 11:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:29:41] 
[2025-11-27 11:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:29:41] 
[2025-11-27 11:29:41] 2025-11-27 10:29:02,493 | INFO     | ***************************************
[2025-11-27 11:29:41] 2025-11-27 10:29:02,995 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | INFO     | sufficient remaining disk space (17303601152 B)
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | INFO     | update_server=False
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:29:41] 2025-11-27 10:29:03,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:29:41] 2025-11-27 10:29:03,250 | INFO     | all data control threads have been joined
[2025-11-27 11:29:41] 2025-11-27 10:29:03,810 | INFO     | all payload control threads have been joined
[2025-11-27 11:29:41] 2025-11-27 10:29:03,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:29:41] 2025-11-27 10:29:03,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:29:41] 2025-11-27 10:29:03,911 | INFO     | aborting loop
[2025-11-27 11:29:41] 2025-11-27 10:29:04,014 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,015 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,024 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,024 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,256 | INFO     | [data] control thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,283 | INFO     | all job control threads have been joined
[2025-11-27 11:29:41] 2025-11-27 10:29:04,815 | INFO     | [payload] control thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,859 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:04,917 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,015 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,200 | INFO     | [job] validate thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,289 | INFO     | [job] control thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,333 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,398 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:05,462 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:07,900 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:29:41] 2025-11-27 10:29:12,643 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-11-27 11:29:41] 2025-11-27 10:29:32,848 | INFO     | PID=2017619 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:29:41] 2025-11-27 10:29:32,848 | INFO     | .. there are 2 such processes running
[2025-11-27 11:29:41] 2025-11-27 10:29:32,848 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:29:41] 2025-11-27 10:29:32,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:29:41] 2025-11-27 10:29:32,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:29:41] 2025-11-27 10:29:36,185 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:29:41] 2025-11-27 10:29:36,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347259025216)>', '<ExcThread(monitor, started 140346772154112)>']
[2025-11-27 11:29:41] 2025-11-27 10:29:36,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:29:41] 2025-11-27 10:29:36,868 | INFO     | [monitor] control thread has ended
[2025-11-27 11:29:41] 2025-11-27 10:29:41,382 | INFO     | all workflow threads have been joined
[2025-11-27 11:29:41] 2025-11-27 10:29:41,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:29:41] 2025-11-27 10:29:41,382 | INFO     | traces error code: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:41,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:29:41] 2025-11-27 10:29:41,471 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:29:41] 2025-11-27 10:29:41,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:29:41] 2025-11-27 10:29:41,474 [wrapper] pilotpid: 2017619
[2025-11-27 11:29:41] 2025-11-27 10:29:41,476 [wrapper] Pilot exit status: 0
[2025-11-27 11:29:41] 2025-11-27 10:29:41,483 [wrapper] pandaids: 6895367388
[2025-11-27 11:29:41] 2025-11-27 10:29:41,509 [wrapper] cleanup supervisor_pilot 2214195 2017620
[2025-11-27 11:29:41] 2025-11-27 10:29:41,511 [wrapper] Test setup, not cleaning
[2025-11-27 11:29:41] 2025-11-27 10:29:41,512 [wrapper] apfmon messages muted
[2025-11-27 11:29:41] 2025-11-27 10:29:41,514 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:29:41] 2025-11-27 10:29:41,515 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:29:41]  *** Error codes and diagnostics ***
[2025-11-27 11:29:41]     "exeErrorCode": 0,
[2025-11-27 11:29:41]     "exeErrorDiag": "",
[2025-11-27 11:29:41]     "pilotErrorCode": 0,
[2025-11-27 11:29:41]     "pilotErrorDiag": "",
[2025-11-27 11:29:41]  *** Listing of results directory ***
[2025-11-27 11:29:41] total 1315544
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc    576529 Nov 23 20:15 pilot3.tar.gz
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc      5112 Nov 23 20:17 queuedata.json
[2025-11-27 11:29:41] -rwx------ 1 boinc boinc     36292 Nov 23 20:18 runpilot2-wrapper.sh
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc       100 Nov 27 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:29:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 07:29 run_atlas
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc       105 Nov 27 07:29 job.xml
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc      9445 Nov 27 07:29 init_data.xml
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc 409947149 Nov 27 07:29 EVNT.47483658._000863.pool.root.1
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 07:29 start_atlas.sh
[2025-11-27 11:29:41] drwxrwx--x 2 boinc boinc      4096 Nov 27 07:29 shared
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc    590107 Nov 27 07:29 input.tar.gz
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc         0 Nov 27 07:29 boinc_lockfile
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc      2786 Nov 27 07:29 pandaJob.out
[2025-11-27 11:29:41] -rw------- 1 boinc boinc    991554 Nov 27 07:29 agis_schedconf.cvmfs.json
[2025-11-27 11:29:41] drwx------ 5 boinc boinc      4096 Nov 27 07:29 pilot3
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc       532 Nov 27 11:24 boinc_task_state.xml
[2025-11-27 11:29:41] -rw------- 1 boinc boinc 925137294 Nov 27 11:28 HITS.47556137._008493.pool.root.1
[2025-11-27 11:29:41] -rw------- 1 boinc boinc      1031 Nov 27 11:28 memory_monitor_summary.json
[2025-11-27 11:29:41] -rw------- 1 boinc boinc        95 Nov 27 11:28 pilot_heartbeat.json
[2025-11-27 11:29:41] -rw------- 1 boinc boinc   1516240 Nov 27 11:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:29:41] -rw------- 1 boinc boinc   1972813 Nov 27 11:28 log.47556137._008493.job.log.tgz.1
[2025-11-27 11:29:41] -rw------- 1 boinc boinc      8591 Nov 27 11:29 heartbeat.json
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc      8192 Nov 27 11:29 boinc_mmap_file
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc        29 Nov 27 11:29 wrapper_checkpoint.txt
[2025-11-27 11:29:41] -rw------- 1 boinc boinc      4823 Nov 27 11:29 pilotlog.txt
[2025-11-27 11:29:41] -rw------- 1 boinc boinc   2081536 Nov 27 11:29 log.47556137._008493.job.log.1
[2025-11-27 11:29:41] -rw------- 1 boinc boinc       353 Nov 27 11:29 output.list
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc       620 Nov 27 11:29 runtime_log
[2025-11-27 11:29:41] -rw------- 1 boinc boinc   4075520 Nov 27 11:29 result.tar.gz
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc      8855 Nov 27 11:29 runtime_log.err
[2025-11-27 11:29:41] -rw------- 1 boinc boinc       667 Nov 27 11:29 ctdNDmqmUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmc8KKDmjThdUo.diag
[2025-11-27 11:29:41] -rw-r--r-- 1 boinc boinc     21284 Nov 27 11:29 stderr.txt
[2025-11-27 11:29:41] HITS file was successfully produced:
[2025-11-27 11:29:41] -rw------- 1 boinc boinc 925137294 Nov 27 11:28 shared/HITS.pool.root.1
[2025-11-27 11:29:41]  *** Contents of shared directory: ***
[2025-11-27 11:29:41] total 1308380
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc 409947149 Nov 27 07:29 ATLAS.root_0
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 07:29 start_atlas.sh
[2025-11-27 11:29:41] -rw-r--r-- 2 boinc boinc    590107 Nov 27 07:29 input.tar.gz
[2025-11-27 11:29:41] -rw------- 1 boinc boinc 925137294 Nov 27 11:28 HITS.pool.root.1
[2025-11-27 11:29:41] -rw------- 1 boinc boinc   4075520 Nov 27 11:29 result.tar.gz
11:29:43 (2013755): run_atlas exited; CPU time 168018.585473
11:29:43 (2013755): called boinc_finish(0)

</stderr_txt>
]]>

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