Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:34 (18451): wrapper (7.7.26015): starting
11:12:34 (18451): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 11:12:34] Arguments: --nthreads 12
[2025-11-25 11:12:34] Threads: 12
[2025-11-25 11:12:34] Checking for CVMFS
[2025-11-25 11:12:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:12:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:12:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:12:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:12:35] 2.11.2.0 3035 286420 96180 153287 0 82 17087193 20275201 1 130560 3 128554347 99.968 17060357 14256 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:12:35] CVMFS is ok
[2025-11-25 11:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:12:35] Further information can be found at the LHC@home message board.
[2025-11-25 11:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:12:35] Checking for apptainer binary...
[2025-11-25 11:12:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:12:35] Running /usr/bin/apptainer --version
[2025-11-25 11:12:35] apptainer version 1.3.2-1.el7
[2025-11-25 11:12:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:12:36] c-205-31.aglt2.org
[2025-11-25 11:12:36] apptainer works
[2025-11-25 11:12:36] Set ATHENA_PROC_NUMBER=12
[2025-11-25 11:12:36] Set ATHENA_CORE_NUMBER=12
[2025-11-25 11:12:36] Starting ATLAS job with PandaID=6895939040
[2025-11-25 11:12:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:21:39]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:21:39] 2025-11-25 23:21:04,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:21:39] 2025-11-25 23:21:05,105 | INFO     | PID=22137 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 18:21:39] 2025-11-25 23:21:06,106 | INFO     | time since job start (25695s) is within the limit (172800.0s)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,430 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 18:21:39] 2025-11-25 23:21:06,434 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-25 18:21:39] 2025-11-25 23:21:06,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895939040/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,437 | INFO     | extracted standard info from prmon json
[2025-11-25 18:21:39] 2025-11-25 23:21:06,437 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:21:39] 2025-11-25 23:21:06,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:21:39] 2025-11-25 23:21:06,444 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:21:39] 2025-11-25 23:21:06,444 | INFO     | sum of square deviations: 23137970823.838444
[2025-11-25 18:21:39] 2025-11-25 23:21:06,448 | INFO     | sum of deviations: 417926446391.6247
[2025-11-25 18:21:39] 2025-11-25 23:21:06,448 | INFO     | mean x: 1764100010.2019002
[2025-11-25 18:21:39] 2025-11-25 23:21:06,448 | INFO     | mean y: 3412883.96912114
[2025-11-25 18:21:39] 2025-11-25 23:21:06,448 | INFO     | intersect: -31860403262.930214
[2025-11-25 18:21:39] 2025-11-25 23:21:06,449 | INFO     | chi2: 6.38402834120781
[2025-11-25 18:21:39] 2025-11-25 23:21:06,449 | INFO     | sum of square deviations: 22323358218.632206
[2025-11-25 18:21:39] 2025-11-25 23:21:06,453 | INFO     | sum of deviations: 588756982700.358
[2025-11-25 18:21:39] 2025-11-25 23:21:06,453 | INFO     | mean x: 1764099857.7043269
[2025-11-25 18:21:39] 2025-11-25 23:21:06,453 | INFO     | mean y: 3444853.189903846
[2025-11-25 18:21:39] 2025-11-25 23:21:06,453 | INFO     | intersect: -46522982722.44433
[2025-11-25 18:21:39] 2025-11-25 23:21:06,454 | INFO     | chi2: 2.9863710537222987
[2025-11-25 18:21:39] 2025-11-25 23:21:06,454 | INFO     | current chi2=2.9863710537222987 (change=53.2212124679055 %)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,454 | INFO     | sum of square deviations: 21528069680.83224
[2025-11-25 18:21:39] 2025-11-25 23:21:06,458 | INFO     | sum of deviations: 614366697232.7739
[2025-11-25 18:21:39] 2025-11-25 23:21:06,458 | INFO     | mean x: 1764099705.2043796
[2025-11-25 18:21:39] 2025-11-25 23:21:06,458 | INFO     | mean y: 3449719.3479318735
[2025-11-25 18:21:39] 2025-11-25 23:21:06,458 | INFO     | intersect: -50340316607.305214
[2025-11-25 18:21:39] 2025-11-25 23:21:06,459 | INFO     | chi2: 2.694211349313463
[2025-11-25 18:21:39] 2025-11-25 23:21:06,459 | INFO     | current chi2=2.694211349313463 (change=9.783101267495855 %)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,459 | INFO     | right removable region: 410
[2025-11-25 18:21:39] 2025-11-25 23:21:06,460 | INFO     | sum of square deviations: 22323306368.632214
[2025-11-25 18:21:39] 2025-11-25 23:21:06,463 | INFO     | sum of deviations: 272280855230.32236
[2025-11-25 18:21:39] 2025-11-25 23:21:06,463 | INFO     | mean x: 1764100162.7043269
[2025-11-25 18:21:39] 2025-11-25 23:21:06,464 | INFO     | mean y: 3440077.043269231
[2025-11-25 18:21:39] 2025-11-25 23:21:06,464 | INFO     | intersect: -21513565203.501812
[2025-11-25 18:21:39] 2025-11-25 23:21:06,464 | INFO     | chi2: 3.946934330570305
[2025-11-25 18:21:39] 2025-11-25 23:21:06,464 | INFO     | current chi2=3.946934330570305 (change=38.174862020998255 %)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,465 | INFO     | sum of square deviations: 21528016732.832253
[2025-11-25 18:21:39] 2025-11-25 23:21:06,468 | INFO     | sum of deviations: 229509138375.48932
[2025-11-25 18:21:39] 2025-11-25 23:21:06,468 | INFO     | mean x: 1764100315.2043796
[2025-11-25 18:21:39] 2025-11-25 23:21:06,469 | INFO     | mean y: 3448271.8394160583
[2025-11-25 18:21:39] 2025-11-25 23:21:06,469 | INFO     | intersect: -18803539309.74354
[2025-11-25 18:21:39] 2025-11-25 23:21:06,469 | INFO     | chi2: 3.839415079850803
[2025-11-25 18:21:39] 2025-11-25 23:21:06,469 | INFO     | current chi2=3.839415079850803 (change=2.7241205886485114 %)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,469 | INFO     | left removable region: 20
[2025-11-25 18:21:39] 2025-11-25 23:21:06,470 | INFO     | sum of square deviations: 18393875800.67692
[2025-11-25 18:21:39] 2025-11-25 23:21:06,473 | INFO     | sum of deviations: 368792459189.44617
[2025-11-25 18:21:39] 2025-11-25 23:21:06,473 | INFO     | mean x: 1764100284.7076924
[2025-11-25 18:21:39] 2025-11-25 23:21:06,473 | INFO     | mean y: 3497941.617948718
[2025-11-25 18:21:39] 2025-11-25 23:21:06,473 | INFO     | intersect: -35366257149.922325
[2025-11-25 18:21:39] 2025-11-25 23:21:06,474 | INFO     | chi2: 0.06209751772450213
[2025-11-25 18:21:39] 2025-11-25 23:21:06,474 | INFO     | current memory leak: 20.05 B/s (using 390 data points, chi2=0.06)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,474 | INFO     | could have reported an average CPU frequency of 2365 MHz (18 samples)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | ..............................
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . Timing measurements:
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . get job = 0 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . initial setup = 3 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . payload setup = 7 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . stage-in = 0 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . payload execution = 25658 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . stage-out = 3 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,475 | INFO     | . log creation = 0 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,476 | INFO     | ..............................
[2025-11-25 18:21:39] 2025-11-25 23:21:06,558 | INFO     | 
[2025-11-25 18:21:39] 2025-11-25 23:21:06,559 | INFO     | job summary report
[2025-11-25 18:21:39] 2025-11-25 23:21:06,559 | INFO     | --------------------------------------------------
[2025-11-25 18:21:39] 2025-11-25 23:21:06,559 | INFO     | PanDA job id: 6895939040
[2025-11-25 18:21:39] 2025-11-25 23:21:06,559 | INFO     | task id: 47556149
[2025-11-25 18:21:39] 2025-11-25 23:21:06,559 | INFO     | errors: (none)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | pilot state: finished 
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | transexitcode: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | exeerrorcode: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | exeerrordiag: 
[2025-11-25 18:21:39] 2025-11-25 23:21:06,560 | INFO     | exitcode: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | exitmsg: OK
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | cpuconsumptiontime: 294884 s
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | nevents: 1000
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | neventsw: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | pid: 28589
[2025-11-25 18:21:39] 2025-11-25 23:21:06,561 | INFO     | pgrp: 28589
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | corecount: 12
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | event service: False
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 25669: 2321841, 25674: 2330891, 25679: 2331081}
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | --------------------------------------------------
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | 
[2025-11-25 18:21:39] 2025-11-25 23:21:06,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 18:21:39] 2025-11-25 23:21:06,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,587 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,591 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,591 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:21:39] 2025-11-25 23:21:06,591 | INFO     | job 6895939040 has completed (purged errors)
[2025-11-25 18:21:39] 2025-11-25 23:21:06,591 | INFO     | overall cleanup function is called
[2025-11-25 18:21:39] 2025-11-25 23:21:07,608 | INFO     | --- collectZombieJob: --- 10, [28589]
[2025-11-25 18:21:39] 2025-11-25 23:21:07,608 | INFO     | zombie collector waiting for pid 28589
[2025-11-25 18:21:39] 2025-11-25 23:21:07,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:21:39] 2025-11-25 23:21:07,609 | INFO     | collected zombie processes
[2025-11-25 18:21:39] 2025-11-25 23:21:07,609 | INFO     | will attempt to kill all subprocesses of pid=28589
[2025-11-25 18:21:39] 2025-11-25 23:21:07,702 | INFO     | process IDs to be killed: [28589] (in reverse order)
[2025-11-25 18:21:39] 2025-11-25 23:21:07,755 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:21:39] 2025-11-25 23:21:07,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:21:39] 2025-11-25 23:21:07,759 | INFO     | did not find any defunct processes belonging to 28589
[2025-11-25 18:21:39] 2025-11-25 23:21:07,763 | INFO     | did not find any defunct processes belonging to 28589
[2025-11-25 18:21:39] 2025-11-25 23:21:07,765 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:21:39] 2025-11-25 23:21:07,765 | INFO     | ready for new job
[2025-11-25 18:21:39] 2025-11-25 23:21:07,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:21:39] 2025-11-25 23:21:07,768 | INFO     | ***************************************
[2025-11-25 18:21:39] 2025-11-25 23:21:07,768 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:21:39] 2025-11-25 23:21:07,768 | INFO     | ***************************************
[2025-11-25 18:21:39] 2025-11-25 23:21:07,768 | INFO     | 
[2025-11-25 18:21:39] 2025-11-25 23:21:07,769 | INFO     | architecture information:
[2025-11-25 18:21:39] 2025-11-25 23:21:07,770 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:21:39] 2025-11-25 23:21:07,785 | INFO     | cat /etc/os-release:
[2025-11-25 18:21:39] NAME="CentOS Linux"
[2025-11-25 18:21:39] VERSION="7 (Core)"
[2025-11-25 18:21:39] ID="centos"
[2025-11-25 18:21:39] ID_LIKE="rhel fedora"
[2025-11-25 18:21:39] VERSION_ID="7"
[2025-11-25 18:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:21:39] ANSI_COLOR="0;31"
[2025-11-25 18:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:21:39] HOME_URL="https://www.centos.org/"
[2025-11-25 18:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:21:39] 
[2025-11-25 18:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:21:39] 
[2025-11-25 18:21:39] 2025-11-25 23:21:07,786 | INFO     | ***************************************
[2025-11-25 18:21:39] 2025-11-25 23:21:08,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 18:21:39] 2025-11-25 23:21:08,307 | INFO     | sufficient remaining disk space (28246540288 B)
[2025-11-25 18:21:39] 2025-11-25 23:21:08,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:21:39] 2025-11-25 23:21:08,308 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:21:39] 2025-11-25 23:21:08,308 | INFO     | update_server=False
[2025-11-25 18:21:39] 2025-11-25 23:21:08,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:21:39] 2025-11-25 23:21:08,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:21:39] 2025-11-25 23:21:08,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:21:39] 2025-11-25 23:21:08,309 | INFO     | aborting loop
[2025-11-25 18:21:39] 2025-11-25 23:21:08,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:21:39] 2025-11-25 23:21:08,346 | INFO     | all data control threads have been joined
[2025-11-25 18:21:39] 2025-11-25 23:21:08,716 | INFO     | all payload control threads have been joined
[2025-11-25 18:21:39] 2025-11-25 23:21:09,019 | INFO     | all job control threads have been joined
[2025-11-25 18:21:39] 2025-11-25 23:21:09,314 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,314 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,315 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,352 | INFO     | [data] control thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:21:39] 2025-11-25 23:21:09,564 | INFO     | [job] validate thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,711 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,722 | INFO     | [payload] control thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:09,853 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:10,020 | INFO     | [job] control thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:10,121 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:10,222 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:10,738 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:10,795 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:11,509 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:12,315 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:19,064 | INFO     | job.realtimelogging is not enabled
[2025-11-25 18:21:39] 2025-11-25 23:21:20,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:21:39] 2025-11-25 23:21:33,172 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:21:39] 2025-11-25 23:21:33,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267583518528)>', '<ExcThread(monitor, started 140266677708544)>']
[2025-11-25 18:21:39] 2025-11-25 23:21:38,690 | INFO     | all workflow threads have been joined
[2025-11-25 18:21:39] 2025-11-25 23:21:38,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:21:39] 2025-11-25 23:21:38,691 | INFO     | traces error code: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:38,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | INFO     | PID=22137 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:21:39] 2025-11-25 23:21:39,313 | INFO     | [monitor] control thread has ended
[2025-11-25 18:21:39] 2025-11-25 23:21:39,417 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:21:39] 2025-11-25 23:21:39,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:21:39] 2025-11-25 23:21:39,424 [wrapper] pilotpid: 22137
[2025-11-25 18:21:39] 2025-11-25 23:21:39,428 [wrapper] Pilot exit status: 0
[2025-11-25 18:21:39] 2025-11-25 23:21:39,442 [wrapper] pandaids: 6895939040
[2025-11-25 18:21:39] 2025-11-25 23:21:39,481 [wrapper] cleanup supervisor_pilot  4188 22138
[2025-11-25 18:21:39] 2025-11-25 23:21:39,485 [wrapper] Test setup, not cleaning
[2025-11-25 18:21:39] 2025-11-25 23:21:39,489 [wrapper] apfmon messages muted
[2025-11-25 18:21:39] 2025-11-25 23:21:39,493 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:21:39] 2025-11-25 23:21:39,496 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:21:39]  *** Error codes and diagnostics ***
[2025-11-25 18:21:39]     "exeErrorCode": 0,
[2025-11-25 18:21:39]     "exeErrorDiag": "",
[2025-11-25 18:21:39]     "pilotErrorCode": 0,
[2025-11-25 18:21:39]     "pilotErrorDiag": "",
[2025-11-25 18:21:39]  *** Listing of results directory ***
[2025-11-25 18:21:39] total 1313248
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-25 18:21:39] -rwx------ 1 boincer umatlas     36292 Nov 24 12:23 runpilot2-wrapper.sh
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 12:23 queuedata.json
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas       100 Nov 25 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:21:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 11:12 run_atlas
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas       105 Nov 25 11:12 job.xml
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas 410935941 Nov 25 11:12 EVNT.47483658._001405.pool.root.1
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:12 start_atlas.sh
[2025-11-25 18:21:39] drwxrwx--x 2 boincer umatlas      4096 Nov 25 11:12 shared
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 11:12 input.tar.gz
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas         0 Nov 25 11:12 boinc_lockfile
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 11:12 pandaJob.out
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas        57 Nov 25 11:12 setup.sh.local
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas    991909 Nov 25 11:12 agis_schedconf.cvmfs.json
[2025-11-25 18:21:39] drwx------ 5 boincer umatlas      4096 Nov 25 11:12 pilot3
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas       533 Nov 25 18:11 boinc_task_state.xml
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas 918352728 Nov 25 18:20 HITS.47556149._003919.pool.root.1
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas      1063 Nov 25 18:20 memory_monitor_summary.json
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas        95 Nov 25 18:20 pilot_heartbeat.json
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas   1516240 Nov 25 18:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas   2171602 Nov 25 18:21 log.47556149._003919.job.log.tgz.1
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas      8663 Nov 25 18:21 heartbeat.json
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 18:21 init_data.xml
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 18:21 boinc_mmap_file
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas        29 Nov 25 18:21 wrapper_checkpoint.txt
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas       745 Nov 25 18:21 pilotlog.txt
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas   3605885 Nov 25 18:21 log.47556149._003919.job.log.1
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas       353 Nov 25 18:21 output.list
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas       620 Nov 25 18:21 runtime_log
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas   5795840 Nov 25 18:21 result.tar.gz
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 18:21 runtime_log.err
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas       670 Nov 25 18:21 Rk1KDm5Sph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPoLKDmzRpIQm.diag
[2025-11-25 18:21:39] -rw-r--r-- 1 boincer umatlas     21383 Nov 25 18:21 stderr.txt
[2025-11-25 18:21:39] HITS file was successfully produced:
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas 918352728 Nov 25 18:20 shared/HITS.pool.root.1
[2025-11-25 18:21:39]  *** Contents of shared directory: ***
[2025-11-25 18:21:39] total 1304404
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas 410935941 Nov 25 11:12 ATLAS.root_0
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:12 start_atlas.sh
[2025-11-25 18:21:39] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 11:12 input.tar.gz
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas 918352728 Nov 25 18:20 HITS.pool.root.1
[2025-11-25 18:21:39] -rw------- 1 boincer umatlas   5795840 Nov 25 18:21 result.tar.gz
18:21:41 (18451): run_atlas exited; CPU time 288215.870735
18:21:41 (18451): called boinc_finish(0)

</stderr_txt>
]]>

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