Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:56 (3522133): wrapper (7.7.26015): starting
11:12:56 (3522133): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:12:56] Arguments: --nthreads 8
[2025-11-25 11:12:56] Threads: 8
[2025-11-25 11:12:56] Checking for CVMFS
[2025-11-25 11:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:12:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:12:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:12:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:12:57] 2.10.1.0 4440 250656 172056 153287 1 81 9356454 18432000 3769 130560 2 278247878 99.988 10141099 6488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 11:12:57] CVMFS is ok
[2025-11-25 11:12:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:12:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:12:57] Further information can be found at the LHC@home message board.
[2025-11-25 11:12:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:12:57] Checking for apptainer binary...
[2025-11-25 11:12:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:12:57] Running /usr/bin/apptainer --version
[2025-11-25 11:12:57] apptainer version 1.1.9-1.el8
[2025-11-25 11:12:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:12:57] c-16-31.aglt2.org
[2025-11-25 11:12:57] apptainer works
[2025-11-25 11:12:57] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:12:57] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:12:57] Starting ATLAS job with PandaID=6896044272
[2025-11-25 11:12:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:08:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:08:17] 2025-11-26 10:07:40,659 | INFO     | job 6896044272 has state=finished
[2025-11-26 05:08:17] 2025-11-26 10:07:40,659 | INFO     | preparing for final server update for job 6896044272 in state='finished'
[2025-11-26 05:08:17] 2025-11-26 10:07:40,660 | INFO     | this job has now completed (state=finished)
[2025-11-26 05:08:17] 2025-11-26 10:07:40,660 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 05:08:17] 2025-11-26 10:07:40,660 | INFO     | log transfer has been attempted: DONE
[2025-11-26 05:08:17] 2025-11-26 10:07:40,660 | INFO     | job 6896044272 has finished - writing final server update
[2025-11-26 05:08:17] 2025-11-26 10:07:40,661 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 05:08:17] 2025-11-26 10:07:40,662 | INFO     | executing command: lscpu
[2025-11-26 05:08:17] 2025-11-26 10:07:40,726 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 05:08:17] 2025-11-26 10:07:40,827 | INFO     | monitor loop #4593: job 0:6896044272 is in state 'finished'
[2025-11-26 05:08:17] 2025-11-26 10:07:40,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:08:17] 2025-11-26 10:07:40,998 | INFO     | time since job start (64472s) is within the limit (172800.0s)
[2025-11-26 05:08:17] 2025-11-26 10:07:42,394 | INFO     | PID=3529380 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 05:08:17] 2025-11-26 10:07:42,394 | INFO     | .. there are 5 such processes running
[2025-11-26 05:08:17] 2025-11-26 10:07:43,331 | INFO     | monitor loop #4594: job 0:6896044272 is in state 'finished'
[2025-11-26 05:08:17] 2025-11-26 10:07:43,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:08:17] 2025-11-26 10:07:43,395 | INFO     | time since job start (64475s) is within the limit (172800.0s)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,616 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 05:08:17] 2025-11-26 10:07:44,637 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2949.857850000001
[2025-11-26 05:08:17] 2025-11-26 10:07:44,646 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896044272/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,648 | INFO     | extracted standard info from prmon json
[2025-11-26 05:08:17] 2025-11-26 10:07:44,648 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:08:17] 2025-11-26 10:07:44,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:08:17] 2025-11-26 10:07:44,677 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:08:17] 2025-11-26 10:07:44,679 | INFO     | sum of square deviations: 366187085250.67365
[2025-11-26 05:08:17] 2025-11-26 10:07:44,712 | INFO     | sum of deviations: 32648527030906.23
[2025-11-26 05:08:17] 2025-11-26 10:07:44,712 | INFO     | mean x: 1764119422.0832546
[2025-11-26 05:08:17] 2025-11-26 10:07:44,713 | INFO     | mean y: 4332715.405865657
[2025-11-26 05:08:17] 2025-11-26 10:07:44,713 | INFO     | intersect: -157281117693.65076
[2025-11-26 05:08:17] 2025-11-26 10:07:44,714 | INFO     | chi2: 74.19889803890425
[2025-11-26 05:08:17] 2025-11-26 10:07:44,716 | INFO     | sum of square deviations: 361015052325.6385
[2025-11-26 05:08:17] 2025-11-26 10:07:44,749 | INFO     | sum of deviations: 33252220534248.258
[2025-11-26 05:08:17] 2025-11-26 10:07:44,749 | INFO     | mean x: 1764119269.58365
[2025-11-26 05:08:17] 2025-11-26 10:07:44,749 | INFO     | mean y: 4350515.701520912
[2025-11-26 05:08:17] 2025-11-26 10:07:44,749 | INFO     | intersect: -162484395100.36743
[2025-11-26 05:08:17] 2025-11-26 10:07:44,751 | INFO     | chi2: 75.96406500579594
[2025-11-26 05:08:17] 2025-11-26 10:07:44,751 | INFO     | current chi2=75.96406500579594 (change=-2.3789665527999877 %)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,751 | INFO     | right removable region: 1051
[2025-11-26 05:08:17] 2025-11-26 10:07:44,752 | INFO     | sum of square deviations: 361014998645.6386
[2025-11-26 05:08:17] 2025-11-26 10:07:44,785 | INFO     | sum of deviations: 32132594929189.05
[2025-11-26 05:08:17] 2025-11-26 10:07:44,785 | INFO     | mean x: 1764119574.58365
[2025-11-26 05:08:17] 2025-11-26 10:07:44,786 | INFO     | mean y: 4347917.4657794675
[2025-11-26 05:08:17] 2025-11-26 10:07:44,786 | INFO     | intersect: -157013338077.32233
[2025-11-26 05:08:17] 2025-11-26 10:07:44,787 | INFO     | chi2: 71.7224265443236
[2025-11-26 05:08:17] 2025-11-26 10:07:44,787 | INFO     | current chi2=71.7224265443236 (change=3.337612228799109 %)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,788 | INFO     | left removable region: 10
[2025-11-26 05:08:17] 2025-11-26 10:07:44,789 | INFO     | sum of square deviations: 349808382730.5613
[2025-11-26 05:08:17] 2025-11-26 10:07:44,821 | INFO     | sum of deviations: 32458568494223.21
[2025-11-26 05:08:17] 2025-11-26 10:07:44,821 | INFO     | mean x: 1764119544.0845342
[2025-11-26 05:08:17] 2025-11-26 10:07:44,822 | INFO     | mean y: 4377037.349663785
[2025-11-26 05:08:17] 2025-11-26 10:07:44,822 | INFO     | intersect: -163687512238.41595
[2025-11-26 05:08:17] 2025-11-26 10:07:44,823 | INFO     | chi2: 73.92192433636401
[2025-11-26 05:08:17] 2025-11-26 10:07:44,823 | INFO     | current memory leak: 92.79 B/s (using 1041 data points, chi2=73.92)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,824 | INFO     | could have reported an average CPU frequency of 2910 MHz (39 samples)
[2025-11-26 05:08:17] 2025-11-26 10:07:44,825 | INFO     | ..............................
[2025-11-26 05:08:17] 2025-11-26 10:07:44,825 | INFO     | . Timing measurements:
[2025-11-26 05:08:17] 2025-11-26 10:07:44,825 | INFO     | . get job = 0 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,825 | INFO     | . initial setup = 2 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | . payload setup = 5 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | . stage-in = 0 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | . payload execution = 64441 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | . stage-out = 3 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | . log creation = 0 s
[2025-11-26 05:08:17] 2025-11-26 10:07:44,826 | INFO     | ..............................
[2025-11-26 05:08:17] 2025-11-26 10:07:45,019 | INFO     | 
[2025-11-26 05:08:17] 2025-11-26 10:07:45,020 | INFO     | job summary report
[2025-11-26 05:08:17] 2025-11-26 10:07:45,020 | INFO     | --------------------------------------------------
[2025-11-26 05:08:17] 2025-11-26 10:07:45,020 | INFO     | PanDA job id: 6896044272
[2025-11-26 05:08:17] 2025-11-26 10:07:45,020 | INFO     | task id: 47556173
[2025-11-26 05:08:17] 2025-11-26 10:07:45,020 | INFO     | errors: (none)
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | pilot state: finished 
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | transexitcode: 0
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | exeerrorcode: 0
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | exeerrordiag: 
[2025-11-26 05:08:17] 2025-11-26 10:07:45,021 | INFO     | exitcode: 0
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | exitmsg: OK
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | cpuconsumptiontime: 483113 s
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | nevents: 1000
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | neventsw: 0
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | pid: 3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:45,022 | INFO     | pgrp: 3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | corecount: 8
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | event service: False
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | sizes: {0: 2284262, 1: 2284262, 4: 2284552, 11: 2284580, 64451: 2339321, 64456: 2348499, 64461: 2348689}
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | --------------------------------------------------
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | 
[2025-11-26 05:08:17] 2025-11-26 10:07:45,023 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 05:08:17] 2025-11-26 10:07:45,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:08:17] 2025-11-26 10:07:45,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:08:17] 2025-11-26 10:07:45,048 | INFO     | job 6896044272 has completed (purged errors)
[2025-11-26 05:08:17] 2025-11-26 10:07:45,048 | INFO     | overall cleanup function is called
[2025-11-26 05:08:17] 2025-11-26 10:07:46,066 | INFO     | --- collectZombieJob: --- 10, [3547380]
[2025-11-26 05:08:17] 2025-11-26 10:07:46,066 | INFO     | zombie collector waiting for pid 3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:46,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:08:17] 2025-11-26 10:07:46,067 | INFO     | collected zombie processes
[2025-11-26 05:08:17] 2025-11-26 10:07:46,067 | INFO     | will attempt to kill all subprocesses of pid=3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:46,382 | INFO     | process IDs to be killed: [3547380] (in reverse order)
[2025-11-26 05:08:17] 2025-11-26 10:07:46,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:08:17] 2025-11-26 10:07:46,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:08:17] 2025-11-26 10:07:46,507 | INFO     | did not find any defunct processes belonging to 3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:46,520 | INFO     | did not find any defunct processes belonging to 3547380
[2025-11-26 05:08:17] 2025-11-26 10:07:46,523 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:08:17] 2025-11-26 10:07:46,523 | INFO     | ready for new job
[2025-11-26 05:08:17] 2025-11-26 10:07:46,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:08:17] 2025-11-26 10:07:46,529 | INFO     | ***************************************
[2025-11-26 05:08:17] 2025-11-26 10:07:46,529 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:08:17] 2025-11-26 10:07:46,529 | INFO     | ***************************************
[2025-11-26 05:08:17] 2025-11-26 10:07:46,530 | INFO     | 
[2025-11-26 05:08:17] 2025-11-26 10:07:46,545 | INFO     | architecture information:
[2025-11-26 05:08:17] 2025-11-26 10:07:46,546 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:08:17] 2025-11-26 10:07:46,561 | INFO     | cat /etc/os-release:
[2025-11-26 05:08:17] NAME="CentOS Linux"
[2025-11-26 05:08:17] VERSION="7 (Core)"
[2025-11-26 05:08:17] ID="centos"
[2025-11-26 05:08:17] ID_LIKE="rhel fedora"
[2025-11-26 05:08:17] VERSION_ID="7"
[2025-11-26 05:08:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:08:17] ANSI_COLOR="0;31"
[2025-11-26 05:08:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:08:17] HOME_URL="https://www.centos.org/"
[2025-11-26 05:08:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:08:17] 
[2025-11-26 05:08:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:08:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:08:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:08:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:08:17] 
[2025-11-26 05:08:17] 2025-11-26 10:07:46,562 | INFO     | ***************************************
[2025-11-26 05:08:17] 2025-11-26 10:07:47,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 05:08:17] 2025-11-26 10:07:47,080 | INFO     | sufficient remaining disk space (99273932800 B)
[2025-11-26 05:08:17] 2025-11-26 10:07:47,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:08:17] 2025-11-26 10:07:47,081 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:08:17] 2025-11-26 10:07:47,081 | INFO     | update_server=False
[2025-11-26 05:08:17] 2025-11-26 10:07:47,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:08:17] 2025-11-26 10:07:47,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:08:17] 2025-11-26 10:07:47,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:08:17] 2025-11-26 10:07:47,083 | INFO     | aborting loop
[2025-11-26 05:08:17] 2025-11-26 10:07:47,084 | INFO     | all data control threads have been joined
[2025-11-26 05:08:17] 2025-11-26 10:07:47,812 | INFO     | all job control threads have been joined
[2025-11-26 05:08:17] 2025-11-26 10:07:47,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:08:17] 2025-11-26 10:07:48,083 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,088 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,089 | INFO     | [data] control thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,456 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,532 | INFO     | all payload control threads have been joined
[2025-11-26 05:08:17] 2025-11-26 10:07:48,707 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,790 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:48,817 | INFO     | [job] control thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,213 | INFO     | [job] validate thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,290 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,291 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,311 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,538 | INFO     | [payload] control thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:49,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:08:17] 2025-11-26 10:07:50,003 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:51,002 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:51,089 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:08:17] 2025-11-26 10:07:57,487 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:08:17] 2025-11-26 10:07:59,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453473814336)>', '<ExcThread(monitor, started 140452812551936)>']
[2025-11-26 05:08:17] 2025-11-26 10:08:04,508 | INFO     | all workflow threads have been joined
[2025-11-26 05:08:17] 2025-11-26 10:08:04,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:08:17] 2025-11-26 10:08:04,509 | INFO     | traces error code: 0
[2025-11-26 05:08:17] 2025-11-26 10:08:04,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:08:17] 2025-11-26 10:08:16,871 | INFO     | PID=3529380 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:08:17] 2025-11-26 10:08:16,872 | INFO     | .. there are 5 such processes running
[2025-11-26 05:08:17] 2025-11-26 10:08:16,874 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:08:17] 2025-11-26 10:08:16,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:08:17] 2025-11-26 10:08:16,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:08:17] 2025-11-26 10:08:16,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:08:17] 2025-11-26 10:08:16,875 | INFO     | [monitor] control thread has ended
[2025-11-26 05:08:17] 2025-11-26 10:08:17,000 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:08:17] 2025-11-26 10:08:17,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:08:17] 2025-11-26 10:08:17,005 [wrapper] pilotpid: 3529380
[2025-11-26 05:08:17] 2025-11-26 10:08:17,007 [wrapper] Pilot exit status: 0
[2025-11-26 05:08:17] 2025-11-26 10:08:17,017 [wrapper] pandaids: 6896044272
[2025-11-26 05:08:17] 2025-11-26 10:08:17,076 [wrapper] cleanup supervisor_pilot 3797076 3529381
[2025-11-26 05:08:17] 2025-11-26 10:08:17,078 [wrapper] Test setup, not cleaning
[2025-11-26 05:08:17] 2025-11-26 10:08:17,081 [wrapper] apfmon messages muted
[2025-11-26 05:08:17] 2025-11-26 10:08:17,083 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:08:17] 2025-11-26 10:08:17,086 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:08:17]  *** Error codes and diagnostics ***
[2025-11-26 05:08:17]     "exeErrorCode": 0,
[2025-11-26 05:08:17]     "exeErrorDiag": "",
[2025-11-26 05:08:17]     "pilotErrorCode": 0,
[2025-11-26 05:08:17]     "pilotErrorDiag": "",
[2025-11-26 05:08:17]  *** Listing of results directory ***
[2025-11-26 05:08:17] total 1325864
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-26 05:08:17] -rwx------ 1 boincer umatlas     36292 Nov 24 13:31 runpilot2-wrapper.sh
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 13:31 queuedata.json
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas       100 Nov 25 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:08:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 11:12 run_atlas
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas       105 Nov 25 11:12 job.xml
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas 412745571 Nov 25 11:12 EVNT.47483658._003028.pool.root.1
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:12 start_atlas.sh
[2025-11-26 05:08:17] drwxrwx--x 2 boincer umatlas      4096 Nov 25 11:12 shared
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 11:12 input.tar.gz
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas         0 Nov 25 11:12 boinc_lockfile
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 11:12 pandaJob.out
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas        57 Nov 25 11:12 setup.sh.local
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas    991909 Nov 25 11:13 agis_schedconf.cvmfs.json
[2025-11-26 05:08:17] drwx------ 5 boincer umatlas      4096 Nov 25 11:13 pilot3
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas       533 Nov 26 04:54 boinc_task_state.xml
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas      6014 Nov 26 05:04 init_data.xml
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas 918636080 Nov 26 05:06 HITS.47556173._000104.pool.root.1
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas      1065 Nov 26 05:07 memory_monitor_summary.json
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas   1516240 Nov 26 05:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas   2248271 Nov 26 05:07 log.47556173._000104.job.log.tgz.1
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas      8642 Nov 26 05:07 heartbeat.json
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas        29 Nov 26 05:08 wrapper_checkpoint.txt
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 05:08 boinc_mmap_file
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas        95 Nov 26 05:08 pilot_heartbeat.json
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas       822 Nov 26 05:08 pilotlog.txt
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas   8944833 Nov 26 05:08 log.47556173._000104.job.log.1
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas       353 Nov 26 05:08 output.list
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas       620 Nov 26 05:08 runtime_log
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas  11212800 Nov 26 05:08 result.tar.gz
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 05:08 runtime_log.err
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas       666 Nov 26 05:08 5FVMDmmWqh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAqLKDmkiFGRo.diag
[2025-11-26 05:08:17] -rw-r--r-- 1 boincer umatlas     21775 Nov 26 05:08 stderr.txt
[2025-11-26 05:08:17] HITS file was successfully produced:
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas 918636080 Nov 26 05:06 shared/HITS.pool.root.1
[2025-11-26 05:08:17]  *** Contents of shared directory: ***
[2025-11-26 05:08:17] total 1311736
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas 412745571 Nov 25 11:12 ATLAS.root_0
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:12 start_atlas.sh
[2025-11-26 05:08:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 11:12 input.tar.gz
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas 918636080 Nov 26 05:06 HITS.pool.root.1
[2025-11-26 05:08:17] -rw------- 1 boincer umatlas  11212800 Nov 26 05:08 result.tar.gz
05:08:19 (3522133): run_atlas exited; CPU time 483520.603937
05:08:19 (3522133): called boinc_finish(0)

</stderr_txt>
]]>

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