Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:46 (4170154): wrapper (7.7.26015): starting
15:31:46 (4170154): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:31:46] Arguments: --nthreads 8
[2025-11-25 15:31:46] Threads: 8
[2025-11-25 15:31:46] Checking for CVMFS
[2025-11-25 15:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:31:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:31:50] 2.13.3.0 12257 29044 382912 153296 1 460 28166162 32935936 48774 16776704 0 277372402 99.783 149570732 29549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 15:31:50] CVMFS is ok
[2025-11-25 15:31:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:31:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:31:50] Further information can be found at the LHC@home message board.
[2025-11-25 15:31:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:31:50] Checking for apptainer binary...
[2025-11-25 15:31:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:31:50] Running /usr/bin/apptainer --version
[2025-11-25 15:31:50] apptainer version 1.4.4-1.el9
[2025-11-25 15:31:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:31:51] c-1-3.aglt2.org
[2025-11-25 15:31:51] apptainer works
[2025-11-25 15:31:51] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:31:51] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:31:51] Starting ATLAS job with PandaID=6896044936
[2025-11-25 15:31:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:44:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:44:37] 2025-11-26 19:43:27,606 | INFO     | time since job start (83427s) is within the limit (172800.0s)
[2025-11-26 14:44:37] 2025-11-26 19:43:27,978 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:44:37] 2025-11-26 19:43:28,006 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2776.3795375
[2025-11-26 14:44:37] 2025-11-26 19:43:28,060 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896044936/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,065 | INFO     | extracted standard info from prmon json
[2025-11-26 14:44:37] 2025-11-26 19:43:28,065 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:44:37] 2025-11-26 19:43:28,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:44:37] 2025-11-26 19:43:28,127 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:44:37] 2025-11-26 19:43:28,134 | INFO     | sum of square deviations: 788623726013.1525
[2025-11-26 14:44:37] 2025-11-26 19:43:28,200 | INFO     | sum of deviations: 4268820258828.6655
[2025-11-26 14:44:37] 2025-11-26 19:43:28,201 | INFO     | mean x: 1764144525.7391942
[2025-11-26 14:44:37] 2025-11-26 19:43:28,201 | INFO     | mean y: 2950592.7406593408
[2025-11-26 14:44:37] 2025-11-26 19:43:28,201 | INFO     | intersect: -9546363792.0152
[2025-11-26 14:44:37] 2025-11-26 19:43:28,203 | INFO     | chi2: 14.492677096167064
[2025-11-26 14:44:37] 2025-11-26 19:43:28,204 | INFO     | sum of square deviations: 779989832357.971
[2025-11-26 14:44:37] 2025-11-26 19:43:28,264 | INFO     | sum of deviations: 4738443471478.923
[2025-11-26 14:44:37] 2025-11-26 19:43:28,264 | INFO     | mean x: 1764144373.2455883
[2025-11-26 14:44:37] 2025-11-26 19:43:28,264 | INFO     | mean y: 2958886.030147059
[2025-11-26 14:44:37] 2025-11-26 19:43:28,264 | INFO     | intersect: -10714230032.806158
[2025-11-26 14:44:37] 2025-11-26 19:43:28,270 | INFO     | chi2: 11.322100895184024
[2025-11-26 14:44:37] 2025-11-26 19:43:28,270 | INFO     | current chi2=11.322100895184024 (change=21.877091305798675 %)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,270 | INFO     | right removable region: 1359
[2025-11-26 14:44:37] 2025-11-26 19:43:28,272 | INFO     | sum of square deviations: 779988384217.9724
[2025-11-26 14:44:37] 2025-11-26 19:43:28,342 | INFO     | monitor loop #4573: job 0:6896044936 is in state 'finished'
[2025-11-26 14:44:37] 2025-11-26 19:43:28,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,347 | INFO     | sum of deviations: 3722270438276.0835
[2025-11-26 14:44:37] 2025-11-26 19:43:28,348 | INFO     | mean x: 1764144678.2455883
[2025-11-26 14:44:37] 2025-11-26 19:43:28,348 | INFO     | mean y: 2960243.056617647
[2025-11-26 14:44:37] 2025-11-26 19:43:28,348 | INFO     | intersect: -8415913316.527757
[2025-11-26 14:44:37] 2025-11-26 19:43:28,350 | INFO     | chi2: 10.537156130625558
[2025-11-26 14:44:37] 2025-11-26 19:43:28,350 | INFO     | current chi2=10.537156130625558 (change=27.293238780484792 %)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,355 | INFO     | sum of square deviations: 771416299422.669
[2025-11-26 14:44:37] 2025-11-26 19:43:28,427 | INFO     | sum of deviations: 3266369983101.577
[2025-11-26 14:44:37] 2025-11-26 19:43:28,427 | INFO     | mean x: 1764144830.7520294
[2025-11-26 14:44:37] 2025-11-26 19:43:28,427 | INFO     | mean y: 2968351.153505535
[2025-11-26 14:44:37] 2025-11-26 19:43:28,427 | INFO     | intersect: -7466863081.400885
[2025-11-26 14:44:37] 2025-11-26 19:43:28,429 | INFO     | chi2: 7.859340185937531
[2025-11-26 14:44:37] 2025-11-26 19:43:28,429 | INFO     | current chi2=7.859340185937531 (change=25.413080260860227 %)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,435 | INFO     | sum of square deviations: 762907817171.3599
[2025-11-26 14:44:37] 2025-11-26 19:43:28,502 | INFO     | sum of deviations: 3114784451992.1226
[2025-11-26 14:44:37] 2025-11-26 19:43:28,503 | INFO     | mean x: 1764144983.2533333
[2025-11-26 14:44:37] 2025-11-26 19:43:28,503 | INFO     | mean y: 2971065.862222222
[2025-11-26 14:44:37] 2025-11-26 19:43:28,503 | INFO     | intersect: -7199644035.489067
[2025-11-26 14:44:37] 2025-11-26 19:43:28,509 | INFO     | chi2: 7.589260306540298
[2025-11-26 14:44:37] 2025-11-26 19:43:28,509 | INFO     | current chi2=7.589260306540298 (change=3.4364192541312533 %)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,509 | INFO     | left removable region: 30
[2025-11-26 14:44:37] 2025-11-26 19:43:28,511 | INFO     | sum of square deviations: 727859814194.6376
[2025-11-26 14:44:37] 2025-11-26 19:43:28,581 | INFO     | sum of deviations: 3476602220142.1265
[2025-11-26 14:44:37] 2025-11-26 19:43:28,581 | INFO     | mean x: 1764145257.7321293
[2025-11-26 14:44:37] 2025-11-26 19:43:28,581 | INFO     | mean y: 2985160.910458992
[2025-11-26 14:44:37] 2025-11-26 19:43:28,582 | INFO     | intersect: -8423405745.793222
[2025-11-26 14:44:37] 2025-11-26 19:43:28,583 | INFO     | chi2: 3.609212498557083
[2025-11-26 14:44:37] 2025-11-26 19:43:28,583 | INFO     | current memory leak: 4.78 B/s (using 1329 data points, chi2=3.61)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | could have reported an average CPU frequency of 2745 MHz (49 samples)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | ..............................
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | . Timing measurements:
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | . get job = 0 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | . initial setup = 5 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | . payload setup = 40 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,589 | INFO     | . stage-in = 0 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,590 | INFO     | . payload execution = 83269 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,590 | INFO     | . stage-out = 11 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,590 | INFO     | . log creation = 3 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,590 | INFO     | ..............................
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | 
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | job summary report
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | --------------------------------------------------
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | PanDA job id: 6896044936
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | task id: 47556173
[2025-11-26 14:44:37] 2025-11-26 19:43:28,899 | INFO     | errors: (none)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | pilot state: finished 
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | transexitcode: 0
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | exeerrorcode: 0
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | exeerrordiag: 
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | exitcode: 0
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | exitmsg: OK
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | cpuconsumptiontime: 267667 s
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | nevents: 1000
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | neventsw: 0
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | pid: 13225
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | pgrp: 13225
[2025-11-26 14:44:37] 2025-11-26 19:43:28,900 | INFO     | corecount: 8
[2025-11-26 14:44:37] 2025-11-26 19:43:28,901 | INFO     | event service: False
[2025-11-26 14:44:37] 2025-11-26 19:43:28,901 | INFO     | sizes: {0: 2284091, 2: 2284290, 13: 2284290, 24: 2284346, 33: 2284636, 35: 2284692, 83316: 2347359, 83328: 2356353, 83331: 2356409, 83361: 2356655}
[2025-11-26 14:44:37] 2025-11-26 19:43:28,901 | INFO     | --------------------------------------------------
[2025-11-26 14:44:37] 2025-11-26 19:43:28,901 | INFO     | 
[2025-11-26 14:44:37] 2025-11-26 19:43:28,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 14:44:37] 2025-11-26 19:43:28,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:44:37] 2025-11-26 19:43:28,989 | INFO     | job 6896044936 has completed (purged errors)
[2025-11-26 14:44:37] 2025-11-26 19:43:28,989 | INFO     | overall cleanup function is called
[2025-11-26 14:44:37] 2025-11-26 19:43:30,037 | INFO     | --- collectZombieJob: --- 10, [13225]
[2025-11-26 14:44:37] 2025-11-26 19:43:30,037 | INFO     | zombie collector waiting for pid 13225
[2025-11-26 14:44:37] 2025-11-26 19:43:30,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:44:37] 2025-11-26 19:43:30,037 | INFO     | collected zombie processes
[2025-11-26 14:44:37] 2025-11-26 19:43:30,037 | INFO     | will attempt to kill all subprocesses of pid=13225
[2025-11-26 14:44:37] 2025-11-26 19:43:32,438 | INFO     | process IDs to be killed: [13225] (in reverse order)
[2025-11-26 14:44:37] 2025-11-26 19:43:32,987 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:44:37] 2025-11-26 19:43:32,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:44:37] 2025-11-26 19:43:33,109 | INFO     | did not find any defunct processes belonging to 13225
[2025-11-26 14:44:37] 2025-11-26 19:43:33,468 | INFO     | did not find any defunct processes belonging to 13225
[2025-11-26 14:44:37] 2025-11-26 19:43:33,488 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:44:37] 2025-11-26 19:43:33,489 | INFO     | ready for new job
[2025-11-26 14:44:37] 2025-11-26 19:43:33,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:44:37] 2025-11-26 19:43:33,504 | INFO     | ***************************************
[2025-11-26 14:44:37] 2025-11-26 19:43:33,504 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:44:37] 2025-11-26 19:43:33,504 | INFO     | ***************************************
[2025-11-26 14:44:37] 2025-11-26 19:43:33,504 | INFO     | 
[2025-11-26 14:44:37] 2025-11-26 19:43:33,512 | INFO     | architecture information:
[2025-11-26 14:44:37] 2025-11-26 19:43:33,513 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:44:37] 2025-11-26 19:43:33,605 | INFO     | cat /etc/os-release:
[2025-11-26 14:44:37] NAME="CentOS Linux"
[2025-11-26 14:44:37] VERSION="7 (Core)"
[2025-11-26 14:44:37] ID="centos"
[2025-11-26 14:44:37] ID_LIKE="rhel fedora"
[2025-11-26 14:44:37] VERSION_ID="7"
[2025-11-26 14:44:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:44:37] ANSI_COLOR="0;31"
[2025-11-26 14:44:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:44:37] HOME_URL="https://www.centos.org/"
[2025-11-26 14:44:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:44:37] 
[2025-11-26 14:44:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:44:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:44:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:44:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:44:37] 
[2025-11-26 14:44:37] 2025-11-26 19:43:33,606 | INFO     | ***************************************
[2025-11-26 14:44:37] 2025-11-26 19:43:34,110 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 14:44:37] 2025-11-26 19:43:34,163 | INFO     | sufficient remaining disk space (66441969664 B)
[2025-11-26 14:44:37] 2025-11-26 19:43:34,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:44:37] 2025-11-26 19:43:34,164 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:44:37] 2025-11-26 19:43:34,164 | INFO     | update_server=False
[2025-11-26 14:44:37] 2025-11-26 19:43:34,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:44:37] 2025-11-26 19:43:34,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:44:37] 2025-11-26 19:43:34,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:44:37] 2025-11-26 19:43:34,302 | INFO     | all job control threads have been joined
[2025-11-26 14:44:37] 2025-11-26 19:43:34,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:44:37] 2025-11-26 19:43:34,435 | INFO     | aborting loop
[2025-11-26 14:44:37] 2025-11-26 19:43:34,468 | INFO     | all data control threads have been joined
[2025-11-26 14:44:37] 2025-11-26 19:43:34,875 | INFO     | all payload control threads have been joined
[2025-11-26 14:44:37] 2025-11-26 19:43:35,170 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,171 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,309 | INFO     | [job] control thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,427 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,435 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,448 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,452 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,474 | INFO     | [data] control thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,546 | INFO     | [job] validate thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,642 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:35,882 | INFO     | [payload] control thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:36,313 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:36,431 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:36,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:36,509 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:43:36,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:44:37] 2025-11-26 19:43:40,780 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:44:37] 2025-11-26 19:44:01,964 | INFO     | PID=4178187 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:44:37] 2025-11-26 19:44:01,964 | INFO     | .. there are 72 such processes running
[2025-11-26 14:44:37] 2025-11-26 19:44:01,965 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:44:37] 2025-11-26 19:44:01,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:44:37] 2025-11-26 19:44:01,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:44:37] 2025-11-26 19:44:30,177 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:44:37] 2025-11-26 19:44:30,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174509098816)>', '<ExcThread(monitor, started 140173639677696)>']
[2025-11-26 14:44:37] 2025-11-26 19:44:31,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:44:37] 2025-11-26 19:44:31,204 | INFO     | [monitor] control thread has ended
[2025-11-26 14:44:37] 2025-11-26 19:44:35,847 | INFO     | all workflow threads have been joined
[2025-11-26 14:44:37] 2025-11-26 19:44:35,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:44:37] 2025-11-26 19:44:35,847 | INFO     | traces error code: 0
[2025-11-26 14:44:37] 2025-11-26 19:44:35,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:44:37] 2025-11-26 19:44:36,267 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:44:37] 2025-11-26 19:44:36,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:44:37] 2025-11-26 19:44:36,278 [wrapper] pilotpid: 4178187
[2025-11-26 14:44:37] 2025-11-26 19:44:36,298 [wrapper] Pilot exit status: 0
[2025-11-26 14:44:37] 2025-11-26 19:44:36,412 [wrapper] pandaids: 6896044936
[2025-11-26 14:44:37] 2025-11-26 19:44:36,691 [wrapper] cleanup supervisor_pilot   21707 4178188
[2025-11-26 14:44:37] 2025-11-26 19:44:36,721 [wrapper] Test setup, not cleaning
[2025-11-26 14:44:37] 2025-11-26 19:44:36,767 [wrapper] apfmon messages muted
[2025-11-26 14:44:37] 2025-11-26 19:44:36,833 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:44:37] 2025-11-26 19:44:36,868 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:44:37]  *** Error codes and diagnostics ***
[2025-11-26 14:44:37]     "exeErrorCode": 0,
[2025-11-26 14:44:37]     "exeErrorDiag": "",
[2025-11-26 14:44:37]     "pilotErrorCode": 0,
[2025-11-26 14:44:37]     "pilotErrorDiag": "",
[2025-11-26 14:44:37]  *** Listing of results directory ***
[2025-11-26 14:44:37] total 1326416
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 13:31 queuedata.json
[2025-11-26 14:44:37] -rwx------. 1 boincer umatlas     36292 Nov 24 13:35 runpilot2-wrapper.sh
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas       100 Nov 25 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:44:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 15:31 run_atlas
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas       105 Nov 25 15:31 job.xml
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas 409549075 Nov 25 15:31 EVNT.47483658._003030.pool.root.1
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:31 start_atlas.sh
[2025-11-26 14:44:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 15:31 shared
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 15:31 input.tar.gz
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas         0 Nov 25 15:31 boinc_lockfile
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 15:31 pandaJob.out
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas        57 Nov 25 15:31 setup.sh.local
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas    991893 Nov 25 15:32 agis_schedconf.cvmfs.json
[2025-11-26 14:44:37] drwx------. 5 boincer umatlas      4096 Nov 25 15:33 pilot3
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:25 boinc_task_state.xml
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas      6841 Nov 26 14:38 init_data.xml
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas 920134661 Nov 26 14:41 HITS.47556173._000126.pool.root.1
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas      1057 Nov 26 14:42 memory_monitor_summary.json
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas   2385034 Nov 26 14:42 log.47556173._000126.job.log.tgz.1
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas        95 Nov 26 14:43 pilot_heartbeat.json
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas      8613 Nov 26 14:43 heartbeat.json
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas      4824 Nov 26 14:44 pilotlog.txt
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas   9935546 Nov 26 14:44 log.47556173._000126.job.log.1
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:44 boinc_mmap_file
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:44 wrapper_checkpoint.txt
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas       353 Nov 26 14:44 output.list
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:44 runtime_log
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas  12339200 Nov 26 14:44 result.tar.gz
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 14:44 runtime_log.err
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas       657 Nov 26 14:44 OXHNDmxaqh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKqLKDm0RIaTo.diag
[2025-11-26 14:44:37] -rw-r--r--. 1 boincer umatlas     21344 Nov 26 14:44 stderr.txt
[2025-11-26 14:44:37] HITS file was successfully produced:
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas 920134661 Nov 26 14:41 shared/HITS.pool.root.1
[2025-11-26 14:44:37]  *** Contents of shared directory: ***
[2025-11-26 14:44:37] total 1311180
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas 409549075 Nov 25 15:31 ATLAS.root_0
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:31 start_atlas.sh
[2025-11-26 14:44:37] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 15:31 input.tar.gz
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas 920134661 Nov 26 14:41 HITS.pool.root.1
[2025-11-26 14:44:37] -rw-------. 1 boincer umatlas  12339200 Nov 26 14:44 result.tar.gz
14:44:39 (4170154): run_atlas exited; CPU time 272362.342637
14:44:39 (4170154): called boinc_finish(0)

</stderr_txt>
]]>

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