Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:12 (523295): wrapper (7.7.26015): starting
12:11:12 (523295): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:11:12] Arguments: --nthreads 8
[2025-11-25 12:11:12] Threads: 8
[2025-11-25 12:11:12] Checking for CVMFS
[2025-11-25 12:11:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:11:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:11:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:11:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:11:12] 2.13.2.0 7156 34182 221432 153290 2 155 40099623 40960001 32087 16776704 0 153245371 99.668 140230791 38297 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:11:12] CVMFS is ok
[2025-11-25 12:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:11:12] Further information can be found at the LHC@home message board.
[2025-11-25 12:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:11:12] Checking for apptainer binary...
[2025-11-25 12:11:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:11:12] Running /usr/bin/apptainer --version
[2025-11-25 12:11:12] apptainer version 1.4.4-1.el9
[2025-11-25 12:11:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:11:13] c-212-18.aglt2.org
[2025-11-25 12:11:13] apptainer works
[2025-11-25 12:11:13] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:11:13] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:11:13] Starting ATLAS job with PandaID=6895348320
[2025-11-25 12:11:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:07:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:07:12] 2025-11-26 13:06:31,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:07:12] 2025-11-26 13:06:31,998 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:07:12] 2025-11-26 13:06:31,999 | INFO     | sum of square deviations: 503018912747.75684
[2025-11-26 08:07:12] 2025-11-26 13:06:32,024 | INFO     | sum of deviations: 1739556620138.8347
[2025-11-26 08:07:12] 2025-11-26 13:06:32,024 | INFO     | mean x: 1764126550.4417021
[2025-11-26 08:07:12] 2025-11-26 13:06:32,024 | INFO     | mean y: 2955555.603404255
[2025-11-26 08:07:12] 2025-11-26 13:06:32,024 | INFO     | intersect: -6097805155.003165
[2025-11-26 08:07:12] 2025-11-26 13:06:32,026 | INFO     | chi2: 14.310783176566614
[2025-11-26 08:07:12] 2025-11-26 13:06:32,027 | INFO     | sum of square deviations: 496625086259.82
[2025-11-26 08:07:12] 2025-11-26 13:06:32,166 | INFO     | sum of deviations: 2166261311600.151
[2025-11-26 08:07:12] 2025-11-26 13:06:32,167 | INFO     | mean x: 1764126397.9478633
[2025-11-26 08:07:12] 2025-11-26 13:06:32,167 | INFO     | mean y: 2965730.363247863
[2025-11-26 08:07:12] 2025-11-26 13:06:32,167 | INFO     | intersect: -7692092111.816835
[2025-11-26 08:07:12] 2025-11-26 13:06:32,211 | INFO     | chi2: 10.696363723275526
[2025-11-26 08:07:12] 2025-11-26 13:06:32,211 | INFO     | current chi2=10.696363723275526 (change=25.256615299780155 %)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,213 | INFO     | sum of square deviations: 490285679396.79364
[2025-11-26 08:07:12] 2025-11-26 13:06:32,266 | INFO     | sum of deviations: 2625232296695.5806
[2025-11-26 08:07:12] 2025-11-26 13:06:32,266 | INFO     | mean x: 1764126245.4540772
[2025-11-26 08:07:12] 2025-11-26 13:06:32,267 | INFO     | mean y: 2976770.0575107294
[2025-11-26 08:07:12] 2025-11-26 13:06:32,267 | INFO     | intersect: -9443028670.509811
[2025-11-26 08:07:12] 2025-11-26 13:06:32,268 | INFO     | chi2: 6.694635938295097
[2025-11-26 08:07:12] 2025-11-26 13:06:32,268 | INFO     | current chi2=6.694635938295097 (change=37.412039161239264 %)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,270 | INFO     | sum of square deviations: 484000459596.17554
[2025-11-26 08:07:12] 2025-11-26 13:06:32,335 | INFO     | sum of deviations: 3041048579135.318
[2025-11-26 08:07:12] 2025-11-26 13:06:32,336 | INFO     | mean x: 1764126092.9603448
[2025-11-26 08:07:12] 2025-11-26 13:06:32,336 | INFO     | mean y: 2986854.6155172414
[2025-11-26 08:07:12] 2025-11-26 13:06:32,336 | INFO     | intersect: -11081285984.481985
[2025-11-26 08:07:12] 2025-11-26 13:06:32,337 | INFO     | chi2: 3.2303859027579596
[2025-11-26 08:07:12] 2025-11-26 13:06:32,337 | INFO     | current chi2=3.2303859027579596 (change=51.74665310357963 %)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,340 | INFO     | sum of square deviations: 477768840505.1114
[2025-11-26 08:07:12] 2025-11-26 13:06:32,388 | INFO     | sum of deviations: 3160052310871.5264
[2025-11-26 08:07:12] 2025-11-26 13:06:32,393 | INFO     | mean x: 1764125940.4623377
[2025-11-26 08:07:12] 2025-11-26 13:06:32,393 | INFO     | mean y: 2989766.264935065
[2025-11-26 08:07:12] 2025-11-26 13:06:32,393 | INFO     | intersect: -11665268567.477896
[2025-11-26 08:07:12] 2025-11-26 13:06:32,394 | INFO     | chi2: 2.837709044612617
[2025-11-26 08:07:12] 2025-11-26 13:06:32,394 | INFO     | current chi2=2.837709044612617 (change=12.155725971008373 %)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,394 | INFO     | right removable region: 1154
[2025-11-26 08:07:12] 2025-11-26 13:06:32,395 | INFO     | sum of square deviations: 496624124352.7143
[2025-11-26 08:07:12] 2025-11-26 13:06:32,535 | INFO     | sum of deviations: 1398483746092.499
[2025-11-26 08:07:12] 2025-11-26 13:06:32,535 | INFO     | mean x: 1764126702.9470086
[2025-11-26 08:07:12] 2025-11-26 13:06:32,535 | INFO     | mean y: 2963681.1854700856
[2025-11-26 08:07:12] 2025-11-26 13:06:32,536 | INFO     | intersect: -4964782344.714285
[2025-11-26 08:07:12] 2025-11-26 13:06:32,536 | INFO     | chi2: 11.985247974723896
[2025-11-26 08:07:12] 2025-11-26 13:06:32,537 | INFO     | current chi2=11.985247974723896 (change=16.250230145689706 %)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,537 | INFO     | left removable region: 10
[2025-11-26 08:07:12] 2025-11-26 13:06:32,538 | INFO     | sum of square deviations: 464247257436.9873
[2025-11-26 08:07:12] 2025-11-26 13:06:32,609 | INFO     | sum of deviations: 2729919483483.8193
[2025-11-26 08:07:12] 2025-11-26 13:06:32,610 | INFO     | mean x: 1764126214.9702797
[2025-11-26 08:07:12] 2025-11-26 13:06:32,610 | INFO     | mean y: 3000835.494755245
[2025-11-26 08:07:12] 2025-11-26 13:06:32,610 | INFO     | intersect: -10370614621.405603
[2025-11-26 08:07:12] 2025-11-26 13:06:32,619 | INFO     | chi2: 0.3423159527615231
[2025-11-26 08:07:12] 2025-11-26 13:06:32,619 | INFO     | current memory leak: 5.88 B/s (using 1144 data points, chi2=0.34)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,620 | INFO     | could have reported an average CPU frequency of 3279 MHz (43 samples)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | ..............................
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . Timing measurements:
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . get job = 0 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . initial setup = 4 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . payload setup = 14 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . stage-in = 0 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . payload execution = 71623 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . stage-out = 9 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | . log creation = 4 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,621 | INFO     | ..............................
[2025-11-26 08:07:12] 2025-11-26 13:06:32,759 | INFO     | time since job start (71694s) is within the limit (172800.0s)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,898 | INFO     | 
[2025-11-26 08:07:12] 2025-11-26 13:06:32,898 | INFO     | job summary report
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | --------------------------------------------------
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | PanDA job id: 6895348320
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | task id: 47556137
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | errors: (none)
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | pilot state: finished 
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | transexitcode: 0
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | exeerrorcode: 0
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | exeerrordiag: 
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | exitcode: 0
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | exitmsg: OK
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | cpuconsumptiontime: 195764 s
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | nevents: 1000
[2025-11-26 08:07:12] 2025-11-26 13:06:32,899 | INFO     | neventsw: 0
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | pid: 533840
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | pgrp: 533840
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | corecount: 8
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | event service: False
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | sizes: {0: 2284087, 1: 2284286, 10: 2284548, 11: 2284576, 71642: 2342889, 71643: 2342888, 71654: 2352066, 71657: 2352122, 71673: 2352368}
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | --------------------------------------------------
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | 
[2025-11-26 08:07:12] 2025-11-26 13:06:32,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 08:07:12] 2025-11-26 13:06:33,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | job 6895348320 has completed (purged errors)
[2025-11-26 08:07:12] 2025-11-26 13:06:33,083 | INFO     | overall cleanup function is called
[2025-11-26 08:07:12] 2025-11-26 13:06:34,193 | INFO     | --- collectZombieJob: --- 10, [533840]
[2025-11-26 08:07:12] 2025-11-26 13:06:34,194 | INFO     | zombie collector waiting for pid 533840
[2025-11-26 08:07:12] 2025-11-26 13:06:34,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:07:12] 2025-11-26 13:06:34,194 | INFO     | collected zombie processes
[2025-11-26 08:07:12] 2025-11-26 13:06:34,194 | INFO     | will attempt to kill all subprocesses of pid=533840
[2025-11-26 08:07:12] 2025-11-26 13:06:37,212 | INFO     | process IDs to be killed: [533840] (in reverse order)
[2025-11-26 08:07:12] 2025-11-26 13:06:37,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:07:12] 2025-11-26 13:06:37,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:07:12] 2025-11-26 13:06:37,638 | INFO     | did not find any defunct processes belonging to 533840
[2025-11-26 08:07:12] 2025-11-26 13:06:37,816 | INFO     | did not find any defunct processes belonging to 533840
[2025-11-26 08:07:12] 2025-11-26 13:06:37,892 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:07:12] 2025-11-26 13:06:37,892 | INFO     | ready for new job
[2025-11-26 08:07:12] 2025-11-26 13:06:37,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:07:12] 2025-11-26 13:06:37,949 | INFO     | ***************************************
[2025-11-26 08:07:12] 2025-11-26 13:06:37,950 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:07:12] 2025-11-26 13:06:37,950 | INFO     | ***************************************
[2025-11-26 08:07:12] 2025-11-26 13:06:37,950 | INFO     | 
[2025-11-26 08:07:12] 2025-11-26 13:06:37,990 | INFO     | architecture information:
[2025-11-26 08:07:12] 2025-11-26 13:06:38,060 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:07:12] 2025-11-26 13:06:38,175 | INFO     | cat /etc/os-release:
[2025-11-26 08:07:12] NAME="CentOS Linux"
[2025-11-26 08:07:12] VERSION="7 (Core)"
[2025-11-26 08:07:12] ID="centos"
[2025-11-26 08:07:12] ID_LIKE="rhel fedora"
[2025-11-26 08:07:12] VERSION_ID="7"
[2025-11-26 08:07:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:07:12] ANSI_COLOR="0;31"
[2025-11-26 08:07:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:07:12] HOME_URL="https://www.centos.org/"
[2025-11-26 08:07:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:07:12] 
[2025-11-26 08:07:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:07:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:07:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:07:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:07:12] 
[2025-11-26 08:07:12] 2025-11-26 13:06:38,175 | INFO     | ***************************************
[2025-11-26 08:07:12] 2025-11-26 13:06:38,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 08:07:12] 2025-11-26 13:06:38,797 | INFO     | sufficient remaining disk space (119634132992 B)
[2025-11-26 08:07:12] 2025-11-26 13:06:38,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:07:12] 2025-11-26 13:06:38,798 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:07:12] 2025-11-26 13:06:38,798 | INFO     | update_server=False
[2025-11-26 08:07:12] 2025-11-26 13:06:38,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:07:12] 2025-11-26 13:06:38,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:07:12] 2025-11-26 13:06:39,163 | INFO     | all data control threads have been joined
[2025-11-26 08:07:12] 2025-11-26 13:06:39,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:07:12] 2025-11-26 13:06:39,574 | INFO     | aborting loop
[2025-11-26 08:07:12] 2025-11-26 13:06:39,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:07:12] 2025-11-26 13:06:39,803 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:39,804 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:39,884 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:39,973 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,102 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,105 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,145 | INFO     | all job control threads have been joined
[2025-11-26 08:07:12] 2025-11-26 13:06:40,169 | INFO     | [data] control thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,291 | INFO     | all payload control threads have been joined
[2025-11-26 08:07:12] 2025-11-26 13:06:40,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,406 | INFO     | [job] validate thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,508 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,580 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:40,596 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:41,153 | INFO     | [job] control thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:41,298 | INFO     | [payload] control thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:41,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:07:12] 2025-11-26 13:06:41,722 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:45,594 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:07:12] 2025-11-26 13:06:51,272 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:07:12] 2025-11-26 13:06:53,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650938668864)>', '<ExcThread(monitor, started 140650666235648)>']
[2025-11-26 08:07:12] 2025-11-26 13:06:58,304 | INFO     | all workflow threads have been joined
[2025-11-26 08:07:12] 2025-11-26 13:06:58,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:07:12] 2025-11-26 13:06:58,305 | INFO     | traces error code: 0
[2025-11-26 08:07:12] 2025-11-26 13:06:58,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:07:12] 2025-11-26 13:07:09,935 | INFO     | PID=527032 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:07:12] 2025-11-26 13:07:09,936 | INFO     | .. there are 37 such processes running
[2025-11-26 08:07:12] 2025-11-26 13:07:09,937 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:07:12] 2025-11-26 13:07:09,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:07:12] 2025-11-26 13:07:09,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:07:12] 2025-11-26 13:07:09,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:07:12] 2025-11-26 13:07:09,937 | INFO     | [monitor] control thread has ended
[2025-11-26 08:07:12] 2025-11-26 13:07:11,161 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:07:12] 2025-11-26 13:07:11,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:07:12] 2025-11-26 13:07:11,208 [wrapper] pilotpid: 527032
[2025-11-26 08:07:12] 2025-11-26 13:07:11,238 [wrapper] Pilot exit status: 0
[2025-11-26 08:07:12] 2025-11-26 13:07:11,288 [wrapper] pandaids: 6895348320
[2025-11-26 08:07:12] 2025-11-26 13:07:11,419 [wrapper] cleanup supervisor_pilot 3115827 527033
[2025-11-26 08:07:12] 2025-11-26 13:07:11,434 [wrapper] Test setup, not cleaning
[2025-11-26 08:07:12] 2025-11-26 13:07:11,483 [wrapper] apfmon messages muted
[2025-11-26 08:07:12] 2025-11-26 13:07:11,544 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:07:12] 2025-11-26 13:07:11,626 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:07:12]  *** Error codes and diagnostics ***
[2025-11-26 08:07:12]     "exeErrorCode": 0,
[2025-11-26 08:07:12]     "exeErrorDiag": "",
[2025-11-26 08:07:12]     "pilotErrorCode": 0,
[2025-11-26 08:07:12]     "pilotErrorDiag": "",
[2025-11-26 08:07:12]  *** Listing of results directory ***
[2025-11-26 08:07:12] total 1328844
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-26 08:07:12] -rwx------. 1 boincer umatlas     36292 Nov 22 14:37 runpilot2-wrapper.sh
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 14:37 queuedata.json
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:07:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:11 run_atlas
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:11 job.xml
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas 412358900 Nov 25 12:11 EVNT.47483658._000476.pool.root.1
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:11 start_atlas.sh
[2025-11-26 08:07:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:11 shared
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 12:11 input.tar.gz
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:11 boinc_lockfile
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas      2782 Nov 25 12:11 pandaJob.out
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas        57 Nov 25 12:11 setup.sh.local
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas    991543 Nov 25 12:11 agis_schedconf.cvmfs.json
[2025-11-26 08:07:12] drwx------. 5 boincer umatlas      4096 Nov 25 12:11 pilot3
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas       532 Nov 26 07:41 boinc_task_state.xml
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas 922606641 Nov 26 08:04 HITS.47556137._004711.pool.root.1
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas      6950 Nov 26 08:04 init_data.xml
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas      1062 Nov 26 08:05 memory_monitor_summary.json
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas   2224314 Nov 26 08:06 log.47556137._004711.job.log.tgz.1
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas      8618 Nov 26 08:06 heartbeat.json
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas        95 Nov 26 08:07 pilot_heartbeat.json
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas       822 Nov 26 08:07 pilotlog.txt
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:07 boinc_mmap_file
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:07 wrapper_checkpoint.txt
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas   8698715 Nov 26 08:07 log.47556137._004711.job.log.1
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas       353 Nov 26 08:07 output.list
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:07 runtime_log
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas  10946560 Nov 26 08:07 result.tar.gz
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas       664 Nov 26 08:07 wayKDmSb8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUFIKDmvMhEfn.diag
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 08:07 runtime_log.err
[2025-11-26 08:07:12] -rw-r--r--. 1 boincer umatlas     21158 Nov 26 08:07 stderr.txt
[2025-11-26 08:07:12] HITS file was successfully produced:
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas 922606641 Nov 26 08:04 shared/HITS.pool.root.1
[2025-11-26 08:07:12]  *** Contents of shared directory: ***
[2025-11-26 08:07:12] total 1314976
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas 412358900 Nov 25 12:11 ATLAS.root_0
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:11 start_atlas.sh
[2025-11-26 08:07:12] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 12:11 input.tar.gz
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas 922606641 Nov 26 08:04 HITS.pool.root.1
[2025-11-26 08:07:12] -rw-------. 1 boincer umatlas  10946560 Nov 26 08:07 result.tar.gz
08:07:34 (523295): run_atlas exited; CPU time 196953.912407
08:07:34 (523295): called boinc_finish(0)

</stderr_txt>
]]>

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