Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:44:13 (456276): wrapper (7.7.26015): starting
21:44:13 (456276): wrapper: running run_atlas (--nthreads 11)
[2025-11-25 21:44:13] Arguments: --nthreads 11
[2025-11-25 21:44:13] Threads: 11
[2025-11-25 21:44:13] Checking for CVMFS
[2025-11-25 21:44:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:44:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:44:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:44:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:44:13] 2.13.3.0 9230 29332 323504 153305 3 194 23749333 32503808 25217 16776704 0 209618308 99.824 91524269 34038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:44:13] CVMFS is ok
[2025-11-25 21:44:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:44:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:44:13] Further information can be found at the LHC@home message board.
[2025-11-25 21:44:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:44:13] Checking for apptainer binary...
[2025-11-25 21:44:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:44:13] Running /usr/bin/apptainer --version
[2025-11-25 21:44:13] apptainer version 1.4.4-1.el9
[2025-11-25 21:44:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:44:14] c-4-35.aglt2.org
[2025-11-25 21:44:14] apptainer works
[2025-11-25 21:44:14] Set ATHENA_PROC_NUMBER=11
[2025-11-25 21:44:14] Set ATHENA_CORE_NUMBER=11
[2025-11-25 21:44:14] Starting ATLAS job with PandaID=6896043713
[2025-11-25 21:44:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:39:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:39:06] 2025-11-26 13:38:30,839 | INFO     | sum of square deviations: 82437759590.90204
[2025-11-26 08:39:06] 2025-11-26 13:38:30,855 | INFO     | sum of deviations: 1304217633965.4119
[2025-11-26 08:39:06] 2025-11-26 13:38:30,856 | INFO     | mean x: 1764144677.7947123
[2025-11-26 08:39:06] 2025-11-26 13:38:30,856 | INFO     | mean y: 3372796.768273717
[2025-11-26 08:39:06] 2025-11-26 13:38:30,856 | INFO     | intersect: -27906514723.998566
[2025-11-26 08:39:06] 2025-11-26 13:38:30,857 | INFO     | chi2: 7.777581866686702
[2025-11-26 08:39:06] 2025-11-26 13:38:30,858 | INFO     | sum of square deviations: 80529973442.17062
[2025-11-26 08:39:06] 2025-11-26 13:38:30,872 | INFO     | sum of deviations: 1577555997930.131
[2025-11-26 08:39:06] 2025-11-26 13:38:30,873 | INFO     | mean x: 1764144525.3087773
[2025-11-26 08:39:06] 2025-11-26 13:38:30,873 | INFO     | mean y: 3394643.923197492
[2025-11-26 08:39:06] 2025-11-26 13:38:30,873 | INFO     | intersect: -34555623050.4635
[2025-11-26 08:39:06] 2025-11-26 13:38:30,874 | INFO     | chi2: 4.015239602886849
[2025-11-26 08:39:06] 2025-11-26 13:38:30,874 | INFO     | current chi2=4.015239602886849 (change=48.374190439767546 %)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,875 | INFO     | sum of square deviations: 78651862268.18297
[2025-11-26 08:39:06] 2025-11-26 13:38:30,886 | INFO     | sum of deviations: 1726939681410.785
[2025-11-26 08:39:06] 2025-11-26 13:38:30,887 | INFO     | mean x: 1764144372.8230648
[2025-11-26 08:39:06] 2025-11-26 13:38:30,887 | INFO     | mean y: 3406749.0695102685
[2025-11-26 08:39:06] 2025-11-26 13:38:30,887 | INFO     | intersect: -38731479282.96945
[2025-11-26 08:39:06] 2025-11-26 13:38:30,888 | INFO     | chi2: 2.499162346529844
[2025-11-26 08:39:06] 2025-11-26 13:38:30,888 | INFO     | current chi2=2.499162346529844 (change=37.7580768845522 %)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,889 | INFO     | sum of square deviations: 76802885345.7325
[2025-11-26 08:39:06] 2025-11-26 13:38:30,900 | INFO     | sum of deviations: 1727123324578.3489
[2025-11-26 08:39:06] 2025-11-26 13:38:30,900 | INFO     | mean x: 1764144220.3248408
[2025-11-26 08:39:06] 2025-11-26 13:38:30,900 | INFO     | mean y: 3406752.2531847134
[2025-11-26 08:39:06] 2025-11-26 13:38:30,900 | INFO     | intersect: -39668209973.17779
[2025-11-26 08:39:06] 2025-11-26 13:38:30,901 | INFO     | chi2: 2.3865249523759484
[2025-11-26 08:39:06] 2025-11-26 13:38:30,901 | INFO     | current chi2=2.3865249523759484 (change=4.507005889805268 %)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,902 | INFO     | right removable region: 627
[2025-11-26 08:39:06] 2025-11-26 13:38:30,903 | INFO     | sum of square deviations: 80529308483.78712
[2025-11-26 08:39:06] 2025-11-26 13:38:30,913 | INFO     | sum of deviations: 1094826399988.7611
[2025-11-26 08:39:06] 2025-11-26 13:38:30,914 | INFO     | mean x: 1764144830.30721
[2025-11-26 08:39:06] 2025-11-26 13:38:30,914 | INFO     | mean y: 3389499.2257053293
[2025-11-26 08:39:06] 2025-11-26 13:38:30,914 | INFO     | intersect: -23980826558.122902
[2025-11-26 08:39:06] 2025-11-26 13:38:30,915 | INFO     | chi2: 5.61639124226122
[2025-11-26 08:39:06] 2025-11-26 13:38:30,915 | INFO     | current chi2=5.61639124226122 (change=27.78743652551435 %)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,916 | INFO     | sum of square deviations: 78650688278.00319
[2025-11-26 08:39:06] 2025-11-26 13:38:30,926 | INFO     | sum of deviations: 1035834241808.4767
[2025-11-26 08:39:06] 2025-11-26 13:38:30,927 | INFO     | mean x: 1764144982.813586
[2025-11-26 08:39:06] 2025-11-26 13:38:30,927 | INFO     | mean y: 3394286.7582938387
[2025-11-26 08:39:06] 2025-11-26 13:38:30,927 | INFO     | intersect: -23230500046.8023
[2025-11-26 08:39:06] 2025-11-26 13:38:30,928 | INFO     | chi2: 5.572590619768748
[2025-11-26 08:39:06] 2025-11-26 13:38:30,928 | INFO     | current chi2=5.572590619768748 (change=0.7798712839463308 %)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,929 | INFO     | left removable region: 20
[2025-11-26 08:39:06] 2025-11-26 13:38:30,929 | INFO     | sum of square deviations: 69352468232.65544
[2025-11-26 08:39:06] 2025-11-26 13:38:30,939 | INFO     | sum of deviations: 1366789098354.8958
[2025-11-26 08:39:06] 2025-11-26 13:38:30,940 | INFO     | mean x: 1764144799.8517299
[2025-11-26 08:39:06] 2025-11-26 13:38:30,940 | INFO     | mean y: 3436496.0988467876
[2025-11-26 08:39:06] 2025-11-26 13:38:30,940 | INFO     | intersect: -34764091492.493706
[2025-11-26 08:39:06] 2025-11-26 13:38:30,941 | INFO     | chi2: 0.12850529994342022
[2025-11-26 08:39:06] 2025-11-26 13:38:30,941 | INFO     | current memory leak: 19.71 B/s (using 607 data points, chi2=0.13)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,942 | INFO     | could have reported an average CPU frequency of 2601 MHz (25 samples)
[2025-11-26 08:39:06] 2025-11-26 13:38:30,942 | INFO     | ..............................
[2025-11-26 08:39:06] 2025-11-26 13:38:30,942 | INFO     | . Timing measurements:
[2025-11-26 08:39:06] 2025-11-26 13:38:30,942 | INFO     | . get job = 0 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . initial setup = 2 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . payload setup = 7 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . stage-in = 0 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . payload execution = 39202 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . stage-out = 4 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | . log creation = 0 s
[2025-11-26 08:39:06] 2025-11-26 13:38:30,943 | INFO     | ..............................
[2025-11-26 08:39:06] 2025-11-26 13:38:31,442 | INFO     | 
[2025-11-26 08:39:06] 2025-11-26 13:38:31,442 | INFO     | job summary report
[2025-11-26 08:39:06] 2025-11-26 13:38:31,444 | INFO     | --------------------------------------------------
[2025-11-26 08:39:06] 2025-11-26 13:38:31,444 | INFO     | PanDA job id: 6896043713
[2025-11-26 08:39:06] 2025-11-26 13:38:31,444 | INFO     | task id: 47556173
[2025-11-26 08:39:06] 2025-11-26 13:38:31,444 | INFO     | errors: (none)
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | pilot state: finished 
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | transexitcode: 0
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | exeerrorcode: 0
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | exeerrordiag: 
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | exitcode: 0
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | exitmsg: OK
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | cpuconsumptiontime: 289325 s
[2025-11-26 08:39:06] 2025-11-26 13:38:31,445 | INFO     | nevents: 1000
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | neventsw: 0
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | pid: 466923
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | pgrp: 466923
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | corecount: 11
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | event service: False
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | sizes: {0: 2283468, 1: 2284324, 6: 2284586, 12: 2284614, 39213: 2327990, 39219: 2336984, 39220: 2337196, 39228: 2337506}
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | --------------------------------------------------
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | 
[2025-11-26 08:39:06] 2025-11-26 13:38:31,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 08:39:06] 2025-11-26 13:38:31,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,646 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:39:06] 2025-11-26 13:38:31,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:39:06] 2025-11-26 13:38:31,647 | INFO     | job 6896043713 has completed (purged errors)
[2025-11-26 08:39:06] 2025-11-26 13:38:31,647 | INFO     | overall cleanup function is called
[2025-11-26 08:39:06] 2025-11-26 13:38:32,731 | INFO     | PID=460028 has CPU usage=20.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:39:06] 2025-11-26 13:38:32,731 | INFO     | .. there are 43 such processes running
[2025-11-26 08:39:06] 2025-11-26 13:38:32,735 | INFO     | --- collectZombieJob: --- 10, [466923]
[2025-11-26 08:39:06] 2025-11-26 13:38:32,735 | INFO     | zombie collector waiting for pid 466923
[2025-11-26 08:39:06] 2025-11-26 13:38:32,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:39:06] 2025-11-26 13:38:32,735 | INFO     | collected zombie processes
[2025-11-26 08:39:06] 2025-11-26 13:38:32,735 | INFO     | will attempt to kill all subprocesses of pid=466923
[2025-11-26 08:39:06] 2025-11-26 13:38:33,375 | INFO     | process IDs to be killed: [466923] (in reverse order)
[2025-11-26 08:39:06] 2025-11-26 13:38:33,677 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:39:06] 2025-11-26 13:38:33,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:39:06] 2025-11-26 13:38:33,718 | INFO     | did not find any defunct processes belonging to 466923
[2025-11-26 08:39:06] 2025-11-26 13:38:33,751 | INFO     | did not find any defunct processes belonging to 466923
[2025-11-26 08:39:06] 2025-11-26 13:38:33,759 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:39:06] 2025-11-26 13:38:33,759 | INFO     | ready for new job
[2025-11-26 08:39:06] 2025-11-26 13:38:33,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:39:06] 2025-11-26 13:38:33,763 | INFO     | ***************************************
[2025-11-26 08:39:06] 2025-11-26 13:38:33,767 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:39:06] 2025-11-26 13:38:33,767 | INFO     | ***************************************
[2025-11-26 08:39:06] 2025-11-26 13:38:33,767 | INFO     | 
[2025-11-26 08:39:06] 2025-11-26 13:38:33,769 | INFO     | architecture information:
[2025-11-26 08:39:06] 2025-11-26 13:38:33,773 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:39:06] 2025-11-26 13:38:33,801 | INFO     | cat /etc/os-release:
[2025-11-26 08:39:06] NAME="CentOS Linux"
[2025-11-26 08:39:06] VERSION="7 (Core)"
[2025-11-26 08:39:06] ID="centos"
[2025-11-26 08:39:06] ID_LIKE="rhel fedora"
[2025-11-26 08:39:06] VERSION_ID="7"
[2025-11-26 08:39:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:39:06] ANSI_COLOR="0;31"
[2025-11-26 08:39:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:39:06] HOME_URL="https://www.centos.org/"
[2025-11-26 08:39:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:39:06] 
[2025-11-26 08:39:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:39:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:39:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:39:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:39:06] 
[2025-11-26 08:39:06] 2025-11-26 13:38:33,801 | INFO     | ***************************************
[2025-11-26 08:39:06] 2025-11-26 13:38:34,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 08:39:06] 2025-11-26 13:38:34,334 | INFO     | sufficient remaining disk space (92464480256 B)
[2025-11-26 08:39:06] 2025-11-26 13:38:34,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:39:06] 2025-11-26 13:38:34,335 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:39:06] 2025-11-26 13:38:34,335 | INFO     | update_server=False
[2025-11-26 08:39:06] 2025-11-26 13:38:34,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:39:06] 2025-11-26 13:38:34,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:39:06] 2025-11-26 13:38:34,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:39:06] 2025-11-26 13:38:34,336 | INFO     | aborting loop
[2025-11-26 08:39:06] 2025-11-26 13:38:34,414 | INFO     | all job control threads have been joined
[2025-11-26 08:39:06] 2025-11-26 13:38:34,818 | INFO     | all payload control threads have been joined
[2025-11-26 08:39:06] 2025-11-26 13:38:35,024 | INFO     | all data control threads have been joined
[2025-11-26 08:39:06] 2025-11-26 13:38:35,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:39:06] 2025-11-26 13:38:35,252 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:39:06] 2025-11-26 13:38:35,340 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:35,344 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:35,421 | INFO     | [job] control thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:35,824 | INFO     | [payload] control thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:35,941 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,030 | INFO     | [data] control thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,063 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,077 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:39:06] 2025-11-26 13:38:36,727 | INFO     | [job] validate thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,799 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,808 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:36,905 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:37,048 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:37,092 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:38,344 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:45,111 | INFO     | job.realtimelogging is not enabled
[2025-11-26 08:39:06] 2025-11-26 13:38:46,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:39:06] 2025-11-26 13:38:47,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916520195904)>', '<ExcThread(monitor, started 139915807422208)>']
[2025-11-26 08:39:06] 2025-11-26 13:38:52,321 | INFO     | all workflow threads have been joined
[2025-11-26 08:39:06] 2025-11-26 13:38:52,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:39:06] 2025-11-26 13:38:52,323 | INFO     | traces error code: 0
[2025-11-26 08:39:06] 2025-11-26 13:38:52,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:39:06] 2025-11-26 13:39:05,340 | INFO     | PID=460028 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:39:06] 2025-11-26 13:39:05,341 | INFO     | .. there are 43 such processes running
[2025-11-26 08:39:06] 2025-11-26 13:39:05,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:39:06] 2025-11-26 13:39:05,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:39:06] 2025-11-26 13:39:05,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:39:06] 2025-11-26 13:39:05,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:39:06] 2025-11-26 13:39:05,342 | INFO     | [monitor] control thread has ended
[2025-11-26 08:39:06] 2025-11-26 13:39:05,710 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:39:06] 2025-11-26 13:39:05,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:39:06] 2025-11-26 13:39:05,741 [wrapper] pilotpid: 460028
[2025-11-26 08:39:06] 2025-11-26 13:39:05,768 [wrapper] Pilot exit status: 0
[2025-11-26 08:39:06] 2025-11-26 13:39:05,877 [wrapper] pandaids: 6896043713
[2025-11-26 08:39:06] 2025-11-26 13:39:06,024 [wrapper] cleanup supervisor_pilot 2537439 460029
[2025-11-26 08:39:06] 2025-11-26 13:39:06,029 [wrapper] Test setup, not cleaning
[2025-11-26 08:39:06] 2025-11-26 13:39:06,038 [wrapper] apfmon messages muted
[2025-11-26 08:39:06] 2025-11-26 13:39:06,043 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:39:06] 2025-11-26 13:39:06,047 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:39:06]  *** Error codes and diagnostics ***
[2025-11-26 08:39:06]     "exeErrorCode": 0,
[2025-11-26 08:39:06]     "exeErrorDiag": "",
[2025-11-26 08:39:06]     "pilotErrorCode": 0,
[2025-11-26 08:39:06]     "pilotErrorDiag": "",
[2025-11-26 08:39:06]  *** Listing of results directory ***
[2025-11-26 08:39:06] total 1305780
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:26 queuedata.json
[2025-11-26 08:39:06] -rwx------. 1 boincer umatlas     36292 Nov 24 12:26 runpilot2-wrapper.sh
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:39:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:44 run_atlas
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:44 job.xml
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas 408697034 Nov 25 21:44 EVNT.47483658._003018.pool.root.1
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:44 start_atlas.sh
[2025-11-26 08:39:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:44 shared
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 21:44 input.tar.gz
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:44 boinc_lockfile
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas      2776 Nov 25 21:44 pandaJob.out
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas        57 Nov 25 21:44 setup.sh.local
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas    991877 Nov 25 21:44 agis_schedconf.cvmfs.json
[2025-11-26 08:39:06] drwx------. 5 boincer umatlas      4096 Nov 25 21:44 pilot3
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:25 boinc_task_state.xml
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 08:27 init_data.xml
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas 909905834 Nov 26 08:37 HITS.47556173._000001.pool.root.1
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas      1057 Nov 26 08:38 memory_monitor_summary.json
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas   2206549 Nov 26 08:38 log.47556173._000001.job.log.tgz.1
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas      8604 Nov 26 08:38 heartbeat.json
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:39 boinc_mmap_file
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:39 wrapper_checkpoint.txt
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas        95 Nov 26 08:39 pilot_heartbeat.json
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas       822 Nov 26 08:39 pilotlog.txt
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas   5093672 Nov 26 08:39 log.47556173._000001.job.log.1
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas       353 Nov 26 08:39 output.list
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:39 runtime_log
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas   7321600 Nov 26 08:39 result.tar.gz
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas      9335 Nov 26 08:39 runtime_log.err
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas       658 Nov 26 08:39 3W9MDmEWph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgoLKDmWKXL0n.diag
[2025-11-26 08:39:06] -rw-r--r--. 1 boincer umatlas     21239 Nov 26 08:39 stderr.txt
[2025-11-26 08:39:06] HITS file was successfully produced:
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas 909905834 Nov 26 08:37 shared/HITS.pool.root.1
[2025-11-26 08:39:06]  *** Contents of shared directory: ***
[2025-11-26 08:39:06] total 1295452
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas 408697034 Nov 25 21:44 ATLAS.root_0
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:44 start_atlas.sh
[2025-11-26 08:39:06] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 21:44 input.tar.gz
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas 909905834 Nov 26 08:37 HITS.pool.root.1
[2025-11-26 08:39:06] -rw-------. 1 boincer umatlas   7321600 Nov 26 08:39 result.tar.gz
08:39:07 (456276): run_atlas exited; CPU time 290262.822063
08:39:07 (456276): called boinc_finish(0)

</stderr_txt>
]]>

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