Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-28 12:50:45 (3922969): vboxwrapper version 26210
2025-11-28 12:50:45 (3922969): BOINC client version: 8.2.5
2025-11-28 12:50:45 (3922969): Detected: VirtualBox VboxManage Interface (Version: 7.0.26)
2025-11-28 12:50:45 (3922969): Successfully copied 'init_data.xml' to the shared directory.
2025-11-28 12:50:45 (3922969): Create VM. (boinc_2435ff2eef934873, slot#1)
2025-11-28 12:50:46 (3922969): Setting Memory Size for VM. (4800MB)
2025-11-28 12:50:46 (3922969): Setting CPU Count for VM. (8)
2025-11-28 12:50:46 (3922969): Setting Chipset Options for VM.
2025-11-28 12:50:46 (3922969): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-28 12:50:46 (3922969): Setting Boot Options for VM.
2025-11-28 12:50:46 (3922969): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-28 12:50:46 (3922969): Enabling VM Network Access.
2025-11-28 12:50:46 (3922969): Disabling USB Support for VM.
2025-11-28 12:50:46 (3922969): Disabling COM Port Support for VM.
2025-11-28 12:50:46 (3922969): Disabling LPT Port Support for VM.
2025-11-28 12:50:46 (3922969): Disabling Audio Support for VM.
2025-11-28 12:50:46 (3922969): Disabling Clipboard Support for VM.
2025-11-28 12:50:46 (3922969): Disabling Drag and Drop Support for VM.
2025-11-28 12:50:46 (3922969): Adding storage controller(s) to VM.
2025-11-28 12:50:46 (3922969): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-28 12:50:47 (3922969): Adding VirtualBox Guest Additions to VM.
2025-11-28 12:50:47 (3922969): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-28 12:50:47 (3922969): forwarding host port 46105 to guest port 80
2025-11-28 12:50:47 (3922969): Enabling remote desktop for VM.
2025-11-28 12:50:47 (3922969): Enabling shared directory for VM.
2025-11-28 12:50:47 (3922969): Starting VM using VBoxManage interface. (boinc_2435ff2eef934873, slot#1)
2025-11-28 12:50:49 (3922969): Successfully started VM. (PID = '3923629')
2025-11-28 12:50:49 (3922969): Reporting VM Process ID to BOINC.
2025-11-28 12:50:49 (3922969): Guest Log: BIOS: VirtualBox 7.0.26
2025-11-28 12:50:49 (3922969): Guest Log: CPUID EDX: 0x178bfbff
2025-11-28 12:50:49 (3922969): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-28 12:50:49 (3922969): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-28 12:50:49 (3922969): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-28 12:50:49 (3922969): Detected: Web Application Enabled (http://localhost:46105)
2025-11-28 12:50:49 (3922969): Detected: Remote Desktop Enabled (localhost:51539)
2025-11-28 12:50:49 (3922969): Preference change detected
2025-11-28 12:50:49 (3922969): Setting CPU throttle for VM. (20%)
2025-11-28 12:50:49 (3922969): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-28 12:50:51 (3922969): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-28 12:50:51 (3922969): Guest Log: BIOS: Booting from Hard Disk...
2025-11-28 12:50:58 (3922969): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-28 12:50:58 (3922969): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-28 12:50:58 (3922969): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-28 12:51:06 (3922969): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-28 12:51:06 (3922969): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-28 12:51:15 (3922969): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000171 main     Log opened 2025-11-28T10:51:14.441557000Z
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000323 main     OS Product: Linux
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000350 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000371 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000393 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000394 main     Process ID: 1369
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000394 main     Package type: LINUX_64BITS_GENERIC
2025-11-28 12:51:15 (3922969): Guest Log: 00:00:00.000871 main     5.2.32 r132073 started. Verbose level = 0
2025-11-28 12:51:15 (3922969): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-28 12:51:15 (3922969): Guest Log: [INFO] Mounting shared directory
2025-11-28 12:51:15 (3922969): Guest Log: [INFO] Checking for init_data.xml
2025-11-28 12:51:22 (3922969): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-28 12:51:22 (3922969): Guest Log: [INFO] Detected branch: prod
2025-11-28 12:51:23 (3922969): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-28 12:51:23 (3922969): Guest Log: Copying input files
2025-11-28 12:51:28 (3922969): Guest Log: Copied input files into RunAtlas.
2025-11-28 12:51:28 (3922969): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-28 12:51:28 (3922969): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-28 12:51:28 (3922969): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-28 12:51:28 (3922969): Guest Log: Further information can be found at the LHC@home message board.
2025-11-28 12:51:38 (3922969): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-28 12:51:38 (3922969): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-28 12:51:38 (3922969): Guest Log: 2.6.3.0 1645 0 30124 153406 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-28 12:51:39 (3922969): Guest Log: copied the webapp to /var/www
2025-11-28 12:51:40 (3922969): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-28 12:51:40 (3922969): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-28 12:51:40 (3922969): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-28 12:51:40 (3922969): Guest Log:  *** Starting ATLAS job. (PandaID=6895329120 taskID=47556137) ***
2025-11-28 14:29:49 (3922969): Status Report: Elapsed Time: '6000.000000'
2025-11-28 14:29:49 (3922969): Status Report: CPU Time: '8878.050000'
2025-11-28 16:08:50 (3922969): Status Report: Elapsed Time: '12000.000000'
2025-11-28 16:08:50 (3922969): Status Report: CPU Time: '19309.270000'
2025-11-28 17:47:50 (3922969): Status Report: Elapsed Time: '18000.000000'
2025-11-28 17:47:50 (3922969): Status Report: CPU Time: '29731.830000'
2025-11-28 19:26:51 (3922969): Status Report: Elapsed Time: '24000.000000'
2025-11-28 19:26:51 (3922969): Status Report: CPU Time: '40161.130000'
2025-11-28 21:05:51 (3922969): Status Report: Elapsed Time: '30000.000000'
2025-11-28 21:05:51 (3922969): Status Report: CPU Time: '50599.970000'
2025-11-28 22:44:52 (3922969): Status Report: Elapsed Time: '36000.000000'
2025-11-28 22:44:52 (3922969): Status Report: CPU Time: '61054.670000'
2025-11-29 00:23:52 (3922969): Status Report: Elapsed Time: '42000.000000'
2025-11-29 00:23:52 (3922969): Status Report: CPU Time: '71542.390000'
2025-11-29 02:02:53 (3922969): Status Report: Elapsed Time: '48000.000000'
2025-11-29 02:02:53 (3922969): Status Report: CPU Time: '82033.470000'
2025-11-29 02:43:33 (3922969): Guest Log:  *** Job finished ***
2025-11-29 02:43:33 (3922969): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:42:44,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:42:48,422 | INFO     | [data] queue_monitor thread has finished
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:26,860 | INFO     | [monitor] cgroup control has ended
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:27,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924842145600)>', '<ExcThread(monitor, started 139924078565120)>']
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:27,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:27,961 | INFO     | [monitor] control thread has ended
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:32,866 | INFO     | all workflow threads have been joined
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:32,866 | INFO     | end of generic workflow (traces error code: 0)
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:32,866 | INFO     | traces error code: 0
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:32,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,001 [wrapper] ==== pilot stdout END ====
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,004 [wrapper] ==== wrapper stdout RESUME ====
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,006 [wrapper] pilotpid: 6085
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,008 [wrapper] Pilot exit status: 0
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,017 [wrapper] pandaids: 6895329120
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,036 [wrapper] cleanup supervisor_pilot  8425 6086
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,039 [wrapper] Test setup, not cleaning
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,041 [wrapper] apfmon messages muted
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,042 [wrapper] ==== wrapper stdout END ====
2025-11-29 02:43:33 (3922969): Guest Log: 2025-11-29 00:43:33,044 [wrapper] ==== wrapper stderr END ====
2025-11-29 02:43:33 (3922969): Guest Log:  *** Error codes and diagnostics ***
2025-11-29 02:43:33 (3922969): Guest Log:     "exeErrorCode": 0,
2025-11-29 02:43:33 (3922969): Guest Log:     "exeErrorDiag": "",
2025-11-29 02:43:33 (3922969): Guest Log:     "pilotErrorCode": 0,
2025-11-29 02:43:33 (3922969): Guest Log:     "pilotErrorDiag": "",
2025-11-29 02:43:33 (3922969): Guest Log:  *** Listing of results directory ***
2025-11-29 02:43:33 (3922969): Guest Log: total 919088
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 18:42 pilot3.tar.gz
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 18:50 queuedata.json
2025-11-29 02:43:33 (3922969): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 18:52 runpilot2-wrapper.sh
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas    590098 Nov 28 10:51 input.tar.gz
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 28 10:51 start_atlas.sh
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas      9439 Nov 28 10:51 init_data.xml
2025-11-29 02:43:33 (3922969): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 28 10:51 EVNT.47483658._000108.pool.root.1 -> /data/./ATLAS.root_0
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 28 10:51 pandaJob.out
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas    991856 Nov 28 10:52 agis_schedconf.cvmfs.json
2025-11-29 02:43:33 (3922969): Guest Log: drwx------. 5 atlas atlas      4096 Nov 28 10:52 pilot3
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas 925173734 Nov 29 00:37 HITS.47556137._001079.pool.root.1
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas      1031 Nov 29 00:38 memory_monitor_summary.json
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 29 00:38 agis_ddmendpoints.agis.ALL.json
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas   1820022 Nov 29 00:38 log.47556137._001079.job.log.tgz.1
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas        95 Nov 29 00:42 pilot_heartbeat.json
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas      8644 Nov 29 00:42 heartbeat.json
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 29 00:43 pilotlog.txt
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas   4239400 Nov 29 00:43 log.47556137._001079.job.log.1
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas       353 Nov 29 00:43 output.list
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 29 00:43 runtime_log
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas   6082560 Nov 29 00:43 result.tar.gz
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas       664 Nov 29 00:43 YIIODmzPlg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmReJKDm0TlNWn.diag
2025-11-29 02:43:33 (3922969): Guest Log: -rw-r--r--. 1 atlas atlas      8753 Nov 29 00:43 runtime_log.err
2025-11-29 02:43:33 (3922969): Guest Log: Looking for outputfile HITS.47556137._001079.pool.root.1
2025-11-29 02:43:33 (3922969): Guest Log: HITS file was successfully produced
2025-11-29 02:43:33 (3922969): Guest Log: -rw-------. 1 atlas atlas 925173734 Nov 29 00:37 /home/atlas/RunAtlas/HITS.47556137._001079.pool.root.1
2025-11-29 02:43:33 (3922969): Guest Log: Successfully finished the ATLAS job!
2025-11-29 02:43:33 (3922969): Guest Log: Copying the results back to the shared directory!
2025-11-29 02:43:34 (3922969): Guest Log:  *** Contents of shared directory: ***
2025-11-29 02:43:34 (3922969): Guest Log: total 407280
2025-11-29 02:43:34 (3922969): Guest Log: -rw-r--r--. 1 root root 410345274 Nov 28 10:50 ATLAS.root_0
2025-11-29 02:43:34 (3922969): Guest Log: -rw-r--r--. 1 root root      9439 Nov 28 10:50 init_data.xml
2025-11-29 02:43:34 (3922969): Guest Log: -rw-r--r--. 1 root root    590098 Nov 28 10:50 input.tar.gz
2025-11-29 02:43:34 (3922969): Guest Log: -rw-r--r--. 1 root root   6082560 Nov 29  2025 result.tar.gz
2025-11-29 02:43:34 (3922969): Guest Log: -rw-r--r--. 1 root root     15847 Nov 28 10:50 start_atlas.sh
2025-11-29 02:43:34 (3922969): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-29 02:43:34 (3922969): VM Completion File Detected.
2025-11-29 02:43:34 (3922969): Powering off VM.
2025-11-29 02:43:34 (3922969): Successfully stopped VM.
2025-11-29 02:43:34 (3922969): Deregistering VM. (boinc_2435ff2eef934873, slot#1)
2025-11-29 02:43:34 (3922969): Removing network bandwidth throttle group from VM.
2025-11-29 02:43:34 (3922969): Removing VM from VirtualBox.
2025-11-29 02:43:40 (3922969): called boinc_finish(0)

</stderr_txt>
]]>

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