Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 21:15:18 (99261): vboxwrapper version 26210
2025-11-25 21:15:18 (99261): BOINC client version: 8.2.4
2025-11-25 21:15:19 (99261): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-25 21:15:19 (99261): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 21:15:19 (99261): Create VM. (boinc_df0e1c39488211f7, slot#2)
2025-11-25 21:15:19 (99261): Setting Memory Size for VM. (4700MB)
2025-11-25 21:15:19 (99261): Setting CPU Count for VM. (7)
2025-11-25 21:15:19 (99261): Setting Chipset Options for VM.
2025-11-25 21:15:19 (99261): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 21:15:19 (99261): Setting Boot Options for VM.
2025-11-25 21:15:19 (99261): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 21:15:19 (99261): Enabling VM Network Access.
2025-11-25 21:15:19 (99261): Disabling USB Support for VM.
2025-11-25 21:15:19 (99261): Disabling COM Port Support for VM.
2025-11-25 21:15:19 (99261): Disabling LPT Port Support for VM.
2025-11-25 21:15:19 (99261): Disabling Audio Support for VM.
2025-11-25 21:15:19 (99261): Disabling Clipboard Support for VM.
2025-11-25 21:15:19 (99261): Disabling Drag and Drop Support for VM.
2025-11-25 21:15:19 (99261): Adding storage controller(s) to VM.
2025-11-25 21:15:19 (99261): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 21:15:19 (99261): Adding VirtualBox Guest Additions to VM.
2025-11-25 21:15:19 (99261): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 21:15:20 (99261): forwarding host port 50545 to guest port 80
2025-11-25 21:15:20 (99261): Enabling remote desktop for VM.
2025-11-25 21:15:20 (99261): Required extension pack not installed, remote desktop not enabled.
2025-11-25 21:15:20 (99261): Enabling shared directory for VM.
2025-11-25 21:15:20 (99261): Starting VM using VBoxManage interface. (boinc_df0e1c39488211f7, slot#2)
2025-11-25 21:15:21 (99261): Successfully started VM. (PID = '99753')
2025-11-25 21:15:21 (99261): Reporting VM Process ID to BOINC.
2025-11-25 21:15:21 (99261): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-25 21:15:21 (99261): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 21:15:21 (99261): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 21:15:21 (99261): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 21:15:21 (99261): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 21:15:21 (99261): Detected: Web Application Enabled (http://localhost:50545)
2025-11-25 21:15:21 (99261): Preference change detected
2025-11-25 21:15:21 (99261): Setting CPU throttle for VM. (100%)
2025-11-25 21:15:21 (99261): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 21:15:23 (99261): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 21:15:23 (99261): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 21:15:25 (99261): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 21:15:25 (99261): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 21:15:25 (99261): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 21:15:30 (99261): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 21:15:30 (99261): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 21:15:34 (99261): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000088 main     Log opened 2025-11-25T19:15:32.002663000Z
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000143 main     OS Product: Linux
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000155 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000164 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000174 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000175 main     Process ID: 1358
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000175 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 21:15:34 (99261): Guest Log: 00:00:00.000558 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 21:15:34 (99261): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 21:15:34 (99261): Guest Log: [INFO] Mounting shared directory
2025-11-25 21:15:34 (99261): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 21:16:25 (99261): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 21:16:25 (99261): Guest Log: [INFO] Detected branch: prod
2025-11-25 21:16:25 (99261): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 21:16:25 (99261): Guest Log: Copying input files
2025-11-25 21:16:26 (99261): Guest Log: Copied input files into RunAtlas.
2025-11-25 21:16:26 (99261): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 21:16:26 (99261): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 21:16:26 (99261): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 21:16:26 (99261): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 21:16:55 (99261): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 21:16:55 (99261): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 21:16:55 (99261): Guest Log: 2.6.3.0 1659 0 30204 153295 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 21:16:56 (99261): Guest Log: copied the webapp to /var/www
2025-11-25 21:16:56 (99261): Guest Log: ATHENA_PROC_NUMBER=7
2025-11-25 21:16:56 (99261): Guest Log: ATHENA_CORE_NUMBER=7
2025-11-25 21:16:56 (99261): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 21:16:56 (99261): Guest Log:  *** Starting ATLAS job. (PandaID=6895334131 taskID=47556137) ***
2025-11-25 22:54:21 (99261): Status Report: Elapsed Time: '6000.000000'
2025-11-25 22:54:21 (99261): Status Report: CPU Time: '38201.050000'
2025-11-25 23:31:00 (99261): VM state change detected. (old = 'running', new = 'paused')
2025-11-26 02:20:51 (99261): Guest Log: 02:15:23.126075 timesync vgsvcTimeSyncWorker: Radical host time change: 10 200 182 000 000ns (HostNow=1 764 116 409 292 000 000 ns HostLast=1 764 106 209 110 000 000 ns)
2025-11-26 02:20:51 (99261): VM state change detected. (old = 'paused', new = 'running')
2025-11-26 02:21:01 (99261): Guest Log: 02:15:33.134482 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 164 211 392 000ns (GuestNow=1 764 116 419 320 040 000 ns GuestLast=1 764 106 255 108 648 000 ns fSetTimeLastLoop=true )
2025-11-26 02:36:56 (99261): VM state change detected. (old = 'running', new = 'paused')
2025-11-26 02:55:28 (99261): VM state change detected. (old = 'paused', new = 'running')
2025-11-26 03:13:03 (99261): VM state change detected. (old = 'running', new = 'paused')
2025-11-26 03:29:58 (99261): VM state change detected. (old = 'paused', new = 'running')
2025-11-26 03:30:18 (99261): Guest Log: 02:49:23.540395 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 127 842 918 000ns (GuestNow=1 764 120 567 565 952 000 ns GuestLast=1 764 118 439 723 034 000 ns fSetTimeLastLoop=true )
2025-11-26 03:58:42 (99261): Status Report: Elapsed Time: '12000.000000'
2025-11-26 03:58:42 (99261): Status Report: CPU Time: '78947.350000'
2025-11-26 04:02:42 (99261): VM state change detected. (old = 'running', new = 'paused')
2025-11-26 04:11:20 (99261): VM state change detected. (old = 'paused', new = 'running')
2025-11-26 04:32:48 (99261): Guest Log:  *** Job finished ***
2025-11-26 04:32:48 (99261): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:08,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:08,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:15,528 | INFO     | [monitor] cgroup control has ended
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:15,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855215974208)>', '<ExcThread(monitor, started 139854755108608)>']
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:16,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:16,768 | INFO     | [monitor] control thread has ended
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,820 | INFO     | all workflow threads have been joined
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,820 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,820 | INFO     | traces error code: 0
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,873 [wrapper] ==== pilot stdout END ====
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,878 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,880 [wrapper] pilotpid: 6074
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,883 [wrapper] Pilot exit status: 0
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,895 [wrapper] pandaids: 6895334131
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,911 [wrapper] cleanup supervisor_pilot 16987 6075
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,915 [wrapper] Test setup, not cleaning
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,918 [wrapper] apfmon messages muted
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,921 [wrapper] ==== wrapper stdout END ====
2025-11-26 04:32:48 (99261): Guest Log: 2025-11-26 02:23:20,923 [wrapper] ==== wrapper stderr END ====
2025-11-26 04:32:48 (99261): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 04:32:48 (99261): Guest Log:     "exeErrorCode": 0,
2025-11-26 04:32:48 (99261): Guest Log:     "exeErrorDiag": "",
2025-11-26 04:32:48 (99261): Guest Log:     "pilotErrorCode": 0,
2025-11-26 04:32:48 (99261): Guest Log:     "pilotErrorDiag": "",
2025-11-26 04:32:48 (99261): Guest Log:  *** Listing of results directory ***
2025-11-26 04:32:48 (99261): Guest Log: total 906328
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 02:36 pilot3.tar.gz
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 02:44 queuedata.json
2025-11-26 04:32:48 (99261): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 02:47 runpilot2-wrapper.sh
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas      9391 Nov 25 19:16 init_data.xml
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas    590095 Nov 25 19:16 input.tar.gz
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 25 19:16 start_atlas.sh
2025-11-26 04:32:48 (99261): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 19:16 EVNT.47483658._000227.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas      2782 Nov 25 19:16 pandaJob.out
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas    991893 Nov 25 19:17 agis_schedconf.cvmfs.json
2025-11-26 04:32:48 (99261): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 19:17 pilot3
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas 917777844 Nov 26 02:22 HITS.47556137._002231.pool.root.1
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas        98 Nov 26 02:22 pilot_heartbeat.json
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 26 02:22 memory_monitor_summary.json
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 02:22 agis_ddmendpoints.agis.ALL.json
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas   1432652 Nov 26 02:22 log.47556137._002231.job.log.tgz.1
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas      8628 Nov 26 02:22 heartbeat.json
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 26 02:23 pilotlog.txt
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas   1794227 Nov 26 02:23 log.47556137._002231.job.log.1
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 02:23 output.list
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 02:23 runtime_log
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas   3246080 Nov 26 02:23 result.tar.gz
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 atlas atlas      8732 Nov 26 02:23 runtime_log.err
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas       653 Nov 26 02:23 qZQODm3psg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEtJKDmgnPQbn.diag
2025-11-26 04:32:48 (99261): Guest Log: Looking for outputfile HITS.47556137._002231.pool.root.1
2025-11-26 04:32:48 (99261): Guest Log: HITS file was successfully produced
2025-11-26 04:32:48 (99261): Guest Log: -rw-------. 1 atlas atlas 917777844 Nov 26 02:22 /home/atlas/RunAtlas/HITS.47556137._002231.pool.root.1
2025-11-26 04:32:48 (99261): Guest Log: Successfully finished the ATLAS job!
2025-11-26 04:32:48 (99261): Guest Log: Copying the results back to the shared directory!
2025-11-26 04:32:48 (99261): Guest Log:  *** Contents of shared directory: ***
2025-11-26 04:32:48 (99261): Guest Log: total 404104
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 root root 409925726 Nov 25 19:15 ATLAS.root_0
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 root root      9391 Nov 25 19:15 init_data.xml
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 root root    590095 Nov 25 19:15 input.tar.gz
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 root root   3246080 Nov 26  2025 result.tar.gz
2025-11-26 04:32:48 (99261): Guest Log: -rw-r--r--. 1 root root     15847 Nov 25 19:15 start_atlas.sh
2025-11-26 04:32:48 (99261): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 04:32:48 (99261): VM Completion File Detected.
2025-11-26 04:32:48 (99261): Powering off VM.
2025-11-26 04:32:49 (99261): Successfully stopped VM.
2025-11-26 04:32:49 (99261): Deregistering VM. (boinc_df0e1c39488211f7, slot#2)
2025-11-26 04:32:49 (99261): Removing network bandwidth throttle group from VM.
2025-11-26 04:32:49 (99261): Removing VM from VirtualBox.
2025-11-26 04:32:54 (99261): called boinc_finish(0)

</stderr_txt>
]]>

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