Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:59 (576067): wrapper (7.7.26015): starting
11:04:59 (576067): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:04:59] Arguments: --nthreads 8
[2025-11-25 11:04:59] Threads: 8
[2025-11-25 11:04:59] Checking for CVMFS
[2025-11-25 11:05:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:05:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:05:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:05:01] 2.13.2.0 10481 33180 301132 153287 1 163 28432274 40960000 20983 16776704 0 62938004 99.787 35391085 33809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:05:01] CVMFS is ok
[2025-11-25 11:05:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:05:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:05:01] Further information can be found at the LHC@home message board.
[2025-11-25 11:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:05:01] Checking for apptainer binary...
[2025-11-25 11:05:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:05:01] Running /usr/bin/apptainer --version
[2025-11-25 11:05:01] apptainer version 1.4.4-1.el9
[2025-11-25 11:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:05:02] c-211-35-3.aglt2.org
[2025-11-25 11:05:02] apptainer works
[2025-11-25 11:05:02] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:05:02] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:05:02] Starting ATLAS job with PandaID=6895884205
[2025-11-25 11:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:37:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:37:52] 2025-11-26 18:36:54,880 | INFO     | sum of deviations: 4405909627046.253
[2025-11-26 13:37:52] 2025-11-26 18:36:54,881 | INFO     | mean x: 1764134530.1984634
[2025-11-26 13:37:52] 2025-11-26 18:36:54,881 | INFO     | mean y: 2907573.68950064
[2025-11-26 13:37:52] 2025-11-26 18:36:54,881 | INFO     | intersect: -6573014832.234965
[2025-11-26 13:37:52] 2025-11-26 18:36:54,883 | INFO     | chi2: 17.995284163401614
[2025-11-26 13:37:52] 2025-11-26 18:36:54,904 | INFO     | sum of square deviations: 1170671978674.0935
[2025-11-26 13:37:52] 2025-11-26 18:36:54,979 | INFO     | time since job start (95440s) is within the limit (172800.0s)
[2025-11-26 13:37:52] 2025-11-26 18:36:55,213 | INFO     | sum of deviations: 5044775962359.802
[2025-11-26 13:37:52] 2025-11-26 18:36:55,214 | INFO     | mean x: 1764134377.716763
[2025-11-26 13:37:52] 2025-11-26 18:36:55,214 | INFO     | mean y: 2916187.4213230573
[2025-11-26 13:37:52] 2025-11-26 18:36:55,214 | INFO     | intersect: -7599266887.941835
[2025-11-26 13:37:52] 2025-11-26 18:36:55,238 | INFO     | chi2: 13.468856421095618
[2025-11-26 13:37:52] 2025-11-26 18:36:55,239 | INFO     | current chi2=13.468856421095618 (change=25.15341075586758 %)
[2025-11-26 13:37:52] 2025-11-26 18:36:55,256 | INFO     | sum of square deviations: 1159434982836.6292
[2025-11-26 13:37:52] 2025-11-26 18:36:55,642 | INFO     | sum of deviations: 5624630758469.693
[2025-11-26 13:37:52] 2025-11-26 18:36:55,642 | INFO     | mean x: 1764134225.2345362
[2025-11-26 13:37:52] 2025-11-26 18:36:55,642 | INFO     | mean y: 2924054.2893041237
[2025-11-26 13:37:52] 2025-11-26 18:36:55,642 | INFO     | intersect: -8555213117.876239
[2025-11-26 13:37:52] 2025-11-26 18:36:55,654 | INFO     | chi2: 9.697129888482074
[2025-11-26 13:37:52] 2025-11-26 18:36:55,654 | INFO     | current chi2=9.697129888482074 (change=28.003316797601848 %)
[2025-11-26 13:37:52] 2025-11-26 18:36:55,656 | INFO     | sum of square deviations: 1148270269181.6716
[2025-11-26 13:37:52] 2025-11-26 18:36:55,945 | INFO     | sum of deviations: 6192366933429.979
[2025-11-26 13:37:52] 2025-11-26 18:36:55,945 | INFO     | mean x: 1764134072.7530704
[2025-11-26 13:37:52] 2025-11-26 18:36:55,946 | INFO     | mean y: 2931809.2146089203
[2025-11-26 13:37:52] 2025-11-26 18:36:55,946 | INFO     | intersect: -9510652049.43437
[2025-11-26 13:37:52] 2025-11-26 18:36:55,971 | INFO     | chi2: 6.135811298823511
[2025-11-26 13:37:52] 2025-11-26 18:36:55,971 | INFO     | current chi2=6.135811298823511 (change=36.7254912599302 %)
[2025-11-26 13:37:52] 2025-11-26 18:36:55,987 | INFO     | sum of square deviations: 1137176851073.9185
[2025-11-26 13:37:52] 2025-11-26 18:36:56,346 | INFO     | sum of deviations: 6431462961119.891
[2025-11-26 13:37:52] 2025-11-26 18:36:56,346 | INFO     | mean x: 1764133920.2671854
[2025-11-26 13:37:52] 2025-11-26 18:36:56,347 | INFO     | mean y: 2935094.1167315175
[2025-11-26 13:37:52] 2025-11-26 18:36:56,347 | INFO     | intersect: -9974371387.226799
[2025-11-26 13:37:52] 2025-11-26 18:36:56,357 | INFO     | chi2: 5.30195945261671
[2025-11-26 13:37:52] 2025-11-26 18:36:56,357 | INFO     | current chi2=5.30195945261671 (change=13.589919989336774 %)
[2025-11-26 13:37:52] 2025-11-26 18:36:56,358 | INFO     | right removable region: 1541
[2025-11-26 13:37:52] 2025-11-26 18:36:56,360 | INFO     | sum of square deviations: 1170666549064.0933
[2025-11-26 13:37:52] 2025-11-26 18:36:56,760 | INFO     | sum of deviations: 3802906167149.8584
[2025-11-26 13:37:52] 2025-11-26 18:36:56,761 | INFO     | mean x: 1764134682.716763
[2025-11-26 13:37:52] 2025-11-26 18:36:56,761 | INFO     | mean y: 2915700.4078355813
[2025-11-26 13:37:52] 2025-11-26 18:36:56,761 | INFO     | intersect: -5727869611.558255
[2025-11-26 13:37:52] 2025-11-26 18:36:56,786 | INFO     | chi2: 14.303480951617832
[2025-11-26 13:37:52] 2025-11-26 18:36:56,786 | INFO     | current chi2=14.303480951617832 (change=20.515392689891968 %)
[2025-11-26 13:37:52] 2025-11-26 18:36:56,786 | INFO     | left removable region: 10
[2025-11-26 13:37:52] 2025-11-26 18:36:56,789 | INFO     | sum of square deviations: 1113014062635.3855
[2025-11-26 13:37:52] 2025-11-26 18:36:57,058 | INFO     | sum of deviations: 5548550369318.54
[2025-11-26 13:37:52] 2025-11-26 18:36:57,059 | INFO     | mean x: 1764134194.806009
[2025-11-26 13:37:52] 2025-11-26 18:36:57,059 | INFO     | mean y: 2947881.941214892
[2025-11-26 13:37:52] 2025-11-26 18:36:57,059 | INFO     | intersect: -8791538878.57777
[2025-11-26 13:37:52] 2025-11-26 18:36:57,083 | INFO     | chi2: 0.5645381113535998
[2025-11-26 13:37:52] 2025-11-26 18:36:57,084 | INFO     | current memory leak: 4.99 B/s (using 1531 data points, chi2=0.56)
[2025-11-26 13:37:52] 2025-11-26 18:36:57,188 | INFO     | could have reported an average CPU frequency of 2614 MHz (55 samples)
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | ..............................
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . Timing measurements:
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . get job = 0 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . initial setup = 13 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . payload setup = 43 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . stage-in = 0 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . payload execution = 95282 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . stage-out = 10 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | . log creation = 2 s
[2025-11-26 13:37:52] 2025-11-26 18:36:57,189 | INFO     | ..............................
[2025-11-26 13:37:52] 2025-11-26 18:36:57,339 | INFO     | time since job start (95443s) is within the limit (172800.0s)
[2025-11-26 13:37:52] 2025-11-26 18:36:59,492 | INFO     | time since job start (95445s) is within the limit (172800.0s)
[2025-11-26 13:37:52] 2025-11-26 18:37:00,162 | INFO     | 
[2025-11-26 13:37:52] 2025-11-26 18:37:00,162 | INFO     | job summary report
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | --------------------------------------------------
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | PanDA job id: 6895884205
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | task id: 47556149
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | errors: (none)
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | pilot state: finished 
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | transexitcode: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | exeerrorcode: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | exeerrordiag: 
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | exitcode: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | exitmsg: OK
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | cpuconsumptiontime: 262293 s
[2025-11-26 13:37:52] 2025-11-26 18:37:00,163 | INFO     | nevents: 1000
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | neventsw: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | pid: 586816
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | pgrp: 586816
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | corecount: 8
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | event service: False
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | sizes: {0: 2283486, 1: 2284087, 2: 2284171, 3: 2284199, 4: 2284398, 5: 2284610, 17: 2284610, 28: 2284638, 30: 2284928, 39: 2284956, 95332: 2352144, 95334: 2352423,
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | --------------------------------------------------
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | 
[2025-11-26 13:37:52] 2025-11-26 18:37:00,164 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 13:37:52] 2025-11-26 18:37:00,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,459 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:37:52] 2025-11-26 18:37:00,460 | INFO     | job 6895884205 has completed (purged errors)
[2025-11-26 13:37:52] 2025-11-26 18:37:00,460 | INFO     | overall cleanup function is called
[2025-11-26 13:37:52] 2025-11-26 18:37:01,565 | INFO     | --- collectZombieJob: --- 10, [586816]
[2025-11-26 13:37:52] 2025-11-26 18:37:01,565 | INFO     | zombie collector waiting for pid 586816
[2025-11-26 13:37:52] 2025-11-26 18:37:01,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:37:52] 2025-11-26 18:37:01,566 | INFO     | collected zombie processes
[2025-11-26 13:37:52] 2025-11-26 18:37:01,566 | INFO     | will attempt to kill all subprocesses of pid=586816
[2025-11-26 13:37:52] 2025-11-26 18:37:06,863 | INFO     | process IDs to be killed: [586816] (in reverse order)
[2025-11-26 13:37:52] 2025-11-26 18:37:07,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:37:52] 2025-11-26 18:37:07,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:37:52] 2025-11-26 18:37:07,349 | INFO     | did not find any defunct processes belonging to 586816
[2025-11-26 13:37:52] 2025-11-26 18:37:07,466 | INFO     | did not find any defunct processes belonging to 586816
[2025-11-26 13:37:52] 2025-11-26 18:37:07,484 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:37:52] 2025-11-26 18:37:07,484 | INFO     | ready for new job
[2025-11-26 13:37:52] 2025-11-26 18:37:07,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:37:52] 2025-11-26 18:37:07,528 | INFO     | ***************************************
[2025-11-26 13:37:52] 2025-11-26 18:37:07,547 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:37:52] 2025-11-26 18:37:07,547 | INFO     | ***************************************
[2025-11-26 13:37:52] 2025-11-26 18:37:07,547 | INFO     | 
[2025-11-26 13:37:52] 2025-11-26 18:37:07,573 | INFO     | architecture information:
[2025-11-26 13:37:52] 2025-11-26 18:37:07,614 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:37:52] 2025-11-26 18:37:07,699 | INFO     | cat /etc/os-release:
[2025-11-26 13:37:52] NAME="CentOS Linux"
[2025-11-26 13:37:52] VERSION="7 (Core)"
[2025-11-26 13:37:52] ID="centos"
[2025-11-26 13:37:52] ID_LIKE="rhel fedora"
[2025-11-26 13:37:52] VERSION_ID="7"
[2025-11-26 13:37:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:37:52] ANSI_COLOR="0;31"
[2025-11-26 13:37:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:37:52] HOME_URL="https://www.centos.org/"
[2025-11-26 13:37:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:37:52] 
[2025-11-26 13:37:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:37:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:37:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:37:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:37:52] 
[2025-11-26 13:37:52] 2025-11-26 18:37:07,700 | INFO     | ***************************************
[2025-11-26 13:37:52] 2025-11-26 18:37:08,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 13:37:52] 2025-11-26 18:37:08,322 | INFO     | sufficient remaining disk space (115872890880 B)
[2025-11-26 13:37:52] 2025-11-26 18:37:08,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:37:52] 2025-11-26 18:37:08,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:37:52] 2025-11-26 18:37:08,322 | INFO     | update_server=False
[2025-11-26 13:37:52] 2025-11-26 18:37:08,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:37:52] 2025-11-26 18:37:08,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:37:52] 2025-11-26 18:37:08,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:37:52] 2025-11-26 18:37:08,665 | INFO     | all payload control threads have been joined
[2025-11-26 13:37:52] 2025-11-26 18:37:08,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:37:52] 2025-11-26 18:37:08,768 | INFO     | aborting loop
[2025-11-26 13:37:52] 2025-11-26 18:37:08,847 | INFO     | all job control threads have been joined
[2025-11-26 13:37:52] 2025-11-26 18:37:09,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:37:52] 2025-11-26 18:37:09,346 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,356 | INFO     | all data control threads have been joined
[2025-11-26 13:37:52] 2025-11-26 18:37:09,470 | INFO     | [job] validate thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,479 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,484 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,490 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,671 | INFO     | [payload] control thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,786 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,852 | INFO     | [job] control thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:09,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,118 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,181 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,330 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,363 | INFO     | [data] control thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,639 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:10,801 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:37:52] 2025-11-26 18:37:12,338 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:37:52] 2025-11-26 18:37:13,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660653983552)>', '<ExcThread(monitor, started 140660019545856)>']
[2025-11-26 13:37:52] 2025-11-26 18:37:18,842 | INFO     | all workflow threads have been joined
[2025-11-26 13:37:52] 2025-11-26 18:37:18,842 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:37:52] 2025-11-26 18:37:18,843 | INFO     | traces error code: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:18,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:37:52] 2025-11-26 18:37:43,416 | INFO     | PID=580005 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 13:37:52] 2025-11-26 18:37:43,416 | INFO     | .. there are 22 such processes running
[2025-11-26 13:37:52] 2025-11-26 18:37:43,422 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:37:52] 2025-11-26 18:37:43,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:37:52] 2025-11-26 18:37:43,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:37:52] 2025-11-26 18:37:43,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:37:52] 2025-11-26 18:37:43,423 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 13:37:52] 2025-11-26 18:37:43,423 | INFO     | [monitor] control thread has ended
[2025-11-26 13:37:52] 2025-11-26 18:37:51,089 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:37:52] 2025-11-26 18:37:51,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:37:52] 2025-11-26 18:37:51,376 [wrapper] pilotpid: 580005
[2025-11-26 13:37:52] 2025-11-26 18:37:51,401 [wrapper] Pilot exit status: 0
[2025-11-26 13:37:52] 2025-11-26 18:37:51,564 [wrapper] pandaids: 6895884205
[2025-11-26 13:37:52] 2025-11-26 18:37:51,851 [wrapper] cleanup supervisor_pilot 3799688 580006
[2025-11-26 13:37:52] 2025-11-26 18:37:51,878 [wrapper] Test setup, not cleaning
[2025-11-26 13:37:52] 2025-11-26 18:37:51,907 [wrapper] apfmon messages muted
[2025-11-26 13:37:52] 2025-11-26 18:37:51,941 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:37:52] 2025-11-26 18:37:51,957 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:37:52]  *** Error codes and diagnostics ***
[2025-11-26 13:37:52]     "exeErrorCode": 0,
[2025-11-26 13:37:52]     "exeErrorDiag": "",
[2025-11-26 13:37:52]     "pilotErrorCode": 0,
[2025-11-26 13:37:52]     "pilotErrorDiag": "",
[2025-11-26 13:37:52]  *** Listing of results directory ***
[2025-11-26 13:37:52] total 1322984
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:11 queuedata.json
[2025-11-26 13:37:52] -rwx------. 1 boincer umatlas     36292 Nov 24 12:14 runpilot2-wrapper.sh
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas       100 Nov 25 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:37:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 11:04 run_atlas
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas       105 Nov 25 11:04 job.xml
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas 410336180 Nov 25 11:04 EVNT.47483658._001404.pool.root.1
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:04 start_atlas.sh
[2025-11-26 13:37:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 11:04 shared
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 11:04 input.tar.gz
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas         0 Nov 25 11:04 boinc_lockfile
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 11:05 pandaJob.out
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas        57 Nov 25 11:05 setup.sh.local
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas    991909 Nov 25 11:06 agis_schedconf.cvmfs.json
[2025-11-26 13:37:52] drwx------. 5 boincer umatlas      4096 Nov 25 11:06 pilot3
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:12 boinc_task_state.xml
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas 912766317 Nov 26 13:27 HITS.47556149._003908.pool.root.1
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas      6880 Nov 26 13:27 init_data.xml
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas      1058 Nov 26 13:36 memory_monitor_summary.json
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas   2421914 Nov 26 13:36 log.47556149._003908.job.log.tgz.1
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas      7963 Nov 26 13:36 heartbeat.json
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas        95 Nov 26 13:37 pilot_heartbeat.json
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas       892 Nov 26 13:37 pilotlog.txt
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:37 wrapper_checkpoint.txt
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas  11436262 Nov 26 13:37 log.47556149._003908.job.log.1
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas       353 Nov 26 13:37 output.list
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:37 runtime_log
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas  13875200 Nov 26 13:37 result.tar.gz
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 13:37 runtime_log.err
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas       662 Nov 26 13:37 PVJODmEKph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmunLKDmeGvkcn.diag
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:37 boinc_mmap_file
[2025-11-26 13:37:52] -rw-r--r--. 1 boincer umatlas     21223 Nov 26 13:37 stderr.txt
[2025-11-26 13:37:52] HITS file was successfully produced:
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas 912766317 Nov 26 13:27 shared/HITS.pool.root.1
[2025-11-26 13:37:52]  *** Contents of shared directory: ***
[2025-11-26 13:37:52] total 1306252
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas 410336180 Nov 25 11:04 ATLAS.root_0
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:04 start_atlas.sh
[2025-11-26 13:37:52] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 11:04 input.tar.gz
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas 912766317 Nov 26 13:27 HITS.pool.root.1
[2025-11-26 13:37:52] -rw-------. 1 boincer umatlas  13875200 Nov 26 13:37 result.tar.gz
13:37:54 (576067): run_atlas exited; CPU time 267049.161068
13:37:54 (576067): called boinc_finish(0)

</stderr_txt>
]]>

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