Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:22:11 (637285): wrapper (7.7.26015): starting
11:22:11 (637285): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:22:11] Arguments: --nthreads 8
[2025-11-25 11:22:11] Threads: 8
[2025-11-25 11:22:11] Checking for CVMFS
[2025-11-25 11:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:22:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:22:33] 2.13.2.0 10481 33198 310424 153289 0 324 28466468 40960000 19297 16776704 0 63063998 99.787 35394179 33809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:22:33] CVMFS is ok
[2025-11-25 11:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:22:33] Further information can be found at the LHC@home message board.
[2025-11-25 11:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:22:33] Checking for apptainer binary...
[2025-11-25 11:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:22:33] Running /usr/bin/apptainer --version
[2025-11-25 11:22:33] apptainer version 1.4.4-1.el9
[2025-11-25 11:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:22:34] c-211-35-3.aglt2.org
[2025-11-25 11:22:34] apptainer works
[2025-11-25 11:22:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:22:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:22:34] Starting ATLAS job with PandaID=6895884167
[2025-11-25 11:22:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:51:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:51:46] 2025-11-26 18:51:08,936 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:51:46] 2025-11-26 18:51:08,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:51:46] 2025-11-26 18:51:08,964 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:51:46] 2025-11-26 18:51:08,971 | INFO     | sum of square deviations: 1177415771439.4363
[2025-11-26 13:51:46] 2025-11-26 18:51:09,074 | INFO     | sum of deviations: 6948012944983.743
[2025-11-26 13:51:46] 2025-11-26 18:51:09,074 | INFO     | mean x: 1764135459.2435896
[2025-11-26 13:51:46] 2025-11-26 18:51:09,074 | INFO     | mean y: 2907057.0980769233
[2025-11-26 13:51:46] 2025-11-26 18:51:09,075 | INFO     | intersect: -10407379865.204956
[2025-11-26 13:51:46] 2025-11-26 18:51:09,077 | INFO     | chi2: 12.729109156603025
[2025-11-26 13:51:46] 2025-11-26 18:51:09,079 | INFO     | sum of square deviations: 1166135464613.9617
[2025-11-26 13:51:46] 2025-11-26 18:51:09,126 | INFO     | sum of deviations: 7522427538896.363
[2025-11-26 13:51:46] 2025-11-26 18:51:09,126 | INFO     | mean x: 1764135306.7620578
[2025-11-26 13:51:46] 2025-11-26 18:51:09,127 | INFO     | mean y: 2914822.060450161
[2025-11-26 13:51:46] 2025-11-26 18:51:09,127 | INFO     | intersect: -11377049527.381054
[2025-11-26 13:51:46] 2025-11-26 18:51:09,128 | INFO     | chi2: 9.095747392727345
[2025-11-26 13:51:46] 2025-11-26 18:51:09,129 | INFO     | current chi2=9.095747392727345 (change=28.54372383153719 %)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,131 | INFO     | sum of square deviations: 1154925401292.955
[2025-11-26 13:51:46] 2025-11-26 18:51:09,202 | INFO     | sum of deviations: 7719122448599.344
[2025-11-26 13:51:46] 2025-11-26 18:51:09,203 | INFO     | mean x: 1764135154.2664516
[2025-11-26 13:51:46] 2025-11-26 18:51:09,203 | INFO     | mean y: 2917496.221935484
[2025-11-26 13:51:46] 2025-11-26 18:51:09,203 | INFO     | intersect: -11787952508.383009
[2025-11-26 13:51:46] 2025-11-26 18:51:09,205 | INFO     | chi2: 8.45037321796155
[2025-11-26 13:51:46] 2025-11-26 18:51:09,205 | INFO     | current chi2=8.45037321796155 (change=7.095339688982729 %)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,205 | INFO     | right removable region: 1549
[2025-11-26 13:51:46] 2025-11-26 18:51:09,207 | INFO     | sum of square deviations: 1166129999013.9595
[2025-11-26 13:51:46] 2025-11-26 18:51:09,267 | INFO     | sum of deviations: 6341974898858.593
[2025-11-26 13:51:46] 2025-11-26 18:51:09,267 | INFO     | mean x: 1764135611.7620578
[2025-11-26 13:51:46] 2025-11-26 18:51:09,267 | INFO     | mean y: 2915245.7556270096
[2025-11-26 13:51:46] 2025-11-26 18:51:09,267 | INFO     | intersect: -9591301331.673822
[2025-11-26 13:51:46] 2025-11-26 18:51:09,273 | INFO     | chi2: 8.895411375831209
[2025-11-26 13:51:46] 2025-11-26 18:51:09,274 | INFO     | current chi2=8.895411375831209 (change=30.117565444736133 %)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,276 | INFO     | sum of square deviations: 1154916648268.4797
[2025-11-26 13:51:46] 2025-11-26 18:51:09,343 | INFO     | sum of deviations: 5793381966392.029
[2025-11-26 13:51:46] 2025-11-26 18:51:09,343 | INFO     | mean x: 1764135764.28
[2025-11-26 13:51:46] 2025-11-26 18:51:09,343 | INFO     | mean y: 2922705.8270967742
[2025-11-26 13:51:46] 2025-11-26 18:51:09,343 | INFO     | intersect: -8846471177.592869
[2025-11-26 13:51:46] 2025-11-26 18:51:09,345 | INFO     | chi2: 5.846086746308366
[2025-11-26 13:51:46] 2025-11-26 18:51:09,345 | INFO     | current chi2=5.846086746308366 (change=34.27974829593428 %)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,347 | INFO     | sum of square deviations: 1143775392140.995
[2025-11-26 13:51:46] 2025-11-26 18:51:09,449 | INFO     | sum of deviations: 5424641086134.829
[2025-11-26 13:51:46] 2025-11-26 18:51:09,469 | INFO     | mean x: 1764135916.7980583
[2025-11-26 13:51:46] 2025-11-26 18:51:09,470 | INFO     | mean y: 2927753.278317152
[2025-11-26 13:51:46] 2025-11-26 18:51:09,470 | INFO     | intersect: -8363928398.326311
[2025-11-26 13:51:46] 2025-11-26 18:51:09,472 | INFO     | chi2: 4.647675914395753
[2025-11-26 13:51:46] 2025-11-26 18:51:09,472 | INFO     | current chi2=4.647675914395753 (change=20.49936793478773 %)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,472 | INFO     | left removable region: 30
[2025-11-26 13:51:46] 2025-11-26 18:51:09,475 | INFO     | sum of square deviations: 1087006794082.6458
[2025-11-26 13:51:46] 2025-11-26 18:51:09,525 | INFO     | sum of deviations: 5878820854732.159
[2025-11-26 13:51:46] 2025-11-26 18:51:09,526 | INFO     | mean x: 1764136038.845293
[2025-11-26 13:51:46] 2025-11-26 18:51:09,526 | INFO     | mean y: 2942905.358130349
[2025-11-26 13:51:46] 2025-11-26 18:51:09,526 | INFO     | intersect: -9537972378.893328
[2025-11-26 13:51:46] 2025-11-26 18:51:09,528 | INFO     | chi2: 0.20527954589806
[2025-11-26 13:51:46] 2025-11-26 18:51:09,528 | INFO     | current memory leak: 5.41 B/s (using 1519 data points, chi2=0.21)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,530 | INFO     | could have reported an average CPU frequency of 2621 MHz (55 samples)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | ..............................
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . Timing measurements:
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . get job = 0 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . initial setup = 4 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . payload setup = 26 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . stage-in = 0 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . payload execution = 95158 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . stage-out = 6 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,531 | INFO     | . log creation = 1 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,532 | INFO     | ..............................
[2025-11-26 13:51:46] 2025-11-26 18:51:09,698 | INFO     | 
[2025-11-26 13:51:46] 2025-11-26 18:51:09,698 | INFO     | job summary report
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | --------------------------------------------------
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | PanDA job id: 6895884167
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | task id: 47556149
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | errors: (none)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | pilot state: finished 
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | transexitcode: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | exeerrorcode: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | exeerrordiag: 
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | exitcode: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:09,699 | INFO     | exitmsg: OK
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | cpuconsumptiontime: 271620 s
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | nevents: 1000
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | neventsw: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | pid: 649036
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | pgrp: 649036
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | corecount: 8
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | event service: False
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | sizes: {0: 2284143, 1: 2284171, 2: 2284370, 13: 2284370, 24: 2284688, 35: 2284716, 95188: 2353263, 95197: 2362313, 95213: 2362503}
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | --------------------------------------------------
[2025-11-26 13:51:46] 2025-11-26 18:51:09,700 | INFO     | 
[2025-11-26 13:51:46] 2025-11-26 18:51:09,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 13:51:46] 2025-11-26 18:51:09,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:51:46] 2025-11-26 18:51:09,822 | INFO     | job 6895884167 has completed (purged errors)
[2025-11-26 13:51:46] 2025-11-26 18:51:09,822 | INFO     | overall cleanup function is called
[2025-11-26 13:51:46] 2025-11-26 18:51:10,854 | INFO     | --- collectZombieJob: --- 10, [649036]
[2025-11-26 13:51:46] 2025-11-26 18:51:10,854 | INFO     | zombie collector waiting for pid 649036
[2025-11-26 13:51:46] 2025-11-26 18:51:10,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:51:46] 2025-11-26 18:51:10,855 | INFO     | collected zombie processes
[2025-11-26 13:51:46] 2025-11-26 18:51:10,855 | INFO     | will attempt to kill all subprocesses of pid=649036
[2025-11-26 13:51:46] 2025-11-26 18:51:13,146 | INFO     | process IDs to be killed: [649036] (in reverse order)
[2025-11-26 13:51:46] 2025-11-26 18:51:13,430 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:51:46] 2025-11-26 18:51:13,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:51:46] 2025-11-26 18:51:13,465 | INFO     | did not find any defunct processes belonging to 649036
[2025-11-26 13:51:46] 2025-11-26 18:51:13,480 | INFO     | did not find any defunct processes belonging to 649036
[2025-11-26 13:51:46] 2025-11-26 18:51:13,482 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:51:46] 2025-11-26 18:51:13,482 | INFO     | ready for new job
[2025-11-26 13:51:46] 2025-11-26 18:51:13,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:51:46] 2025-11-26 18:51:13,491 | INFO     | ***************************************
[2025-11-26 13:51:46] 2025-11-26 18:51:13,491 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:51:46] 2025-11-26 18:51:13,491 | INFO     | ***************************************
[2025-11-26 13:51:46] 2025-11-26 18:51:13,491 | INFO     | 
[2025-11-26 13:51:46] 2025-11-26 18:51:13,543 | INFO     | architecture information:
[2025-11-26 13:51:46] 2025-11-26 18:51:13,601 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:51:46] 2025-11-26 18:51:13,649 | INFO     | cat /etc/os-release:
[2025-11-26 13:51:46] NAME="CentOS Linux"
[2025-11-26 13:51:46] VERSION="7 (Core)"
[2025-11-26 13:51:46] ID="centos"
[2025-11-26 13:51:46] ID_LIKE="rhel fedora"
[2025-11-26 13:51:46] VERSION_ID="7"
[2025-11-26 13:51:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:51:46] ANSI_COLOR="0;31"
[2025-11-26 13:51:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:51:46] HOME_URL="https://www.centos.org/"
[2025-11-26 13:51:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:51:46] 
[2025-11-26 13:51:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:51:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:51:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:51:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:51:46] 
[2025-11-26 13:51:46] 2025-11-26 18:51:13,652 | INFO     | ***************************************
[2025-11-26 13:51:46] 2025-11-26 18:51:14,156 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 13:51:46] 2025-11-26 18:51:14,308 | INFO     | sufficient remaining disk space (117129084928 B)
[2025-11-26 13:51:46] 2025-11-26 18:51:14,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:51:46] 2025-11-26 18:51:14,309 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:51:46] 2025-11-26 18:51:14,309 | INFO     | update_server=False
[2025-11-26 13:51:46] 2025-11-26 18:51:14,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:51:46] 2025-11-26 18:51:14,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:51:46] 2025-11-26 18:51:14,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:51:46] 2025-11-26 18:51:14,332 | INFO     | aborting loop
[2025-11-26 13:51:46] 2025-11-26 18:51:14,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:51:46] 2025-11-26 18:51:14,798 | INFO     | all job control threads have been joined
[2025-11-26 13:51:46] 2025-11-26 18:51:14,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:51:46] 2025-11-26 18:51:14,846 | INFO     | all payload control threads have been joined
[2025-11-26 13:51:46] 2025-11-26 18:51:15,151 | INFO     | all data control threads have been joined
[2025-11-26 13:51:46] 2025-11-26 18:51:15,315 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,342 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,804 | INFO     | [job] validate thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,867 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,869 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,874 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,879 | INFO     | [job] control thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,866 | INFO     | [payload] control thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,880 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,881 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:15,885 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:16,157 | INFO     | [data] control thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:16,533 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:16,644 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:17,562 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:51:46] 2025-11-26 18:51:18,364 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:51:46] 2025-11-26 18:51:18,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933694474048)>', '<ExcThread(monitor, started 139932936935168)>']
[2025-11-26 13:51:46] 2025-11-26 18:51:23,470 | INFO     | all workflow threads have been joined
[2025-11-26 13:51:46] 2025-11-26 18:51:23,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:51:46] 2025-11-26 18:51:23,471 | INFO     | traces error code: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:23,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:51:46] 2025-11-26 18:51:45,104 | INFO     | PID=642403 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 13:51:46] 2025-11-26 18:51:45,105 | INFO     | .. there are 21 such processes running
[2025-11-26 13:51:46] 2025-11-26 18:51:45,136 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:51:46] 2025-11-26 18:51:45,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:51:46] 2025-11-26 18:51:45,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:51:46] 2025-11-26 18:51:45,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:51:46] 2025-11-26 18:51:45,137 | INFO     | [monitor] control thread has ended
[2025-11-26 13:51:46] 2025-11-26 18:51:46,743 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:51:46] 2025-11-26 18:51:46,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:51:46] 2025-11-26 18:51:46,749 [wrapper] pilotpid: 642403
[2025-11-26 13:51:46] 2025-11-26 18:51:46,752 [wrapper] Pilot exit status: 0
[2025-11-26 13:51:46] 2025-11-26 18:51:46,784 [wrapper] pandaids: 6895884167
[2025-11-26 13:51:46] 2025-11-26 18:51:46,854 [wrapper] cleanup supervisor_pilot 3802847 642404
[2025-11-26 13:51:46] 2025-11-26 18:51:46,858 [wrapper] Test setup, not cleaning
[2025-11-26 13:51:46] 2025-11-26 18:51:46,861 [wrapper] apfmon messages muted
[2025-11-26 13:51:46] 2025-11-26 18:51:46,865 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:51:46] 2025-11-26 18:51:46,868 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:51:46]  *** Error codes and diagnostics ***
[2025-11-26 13:51:46]     "exeErrorCode": 0,
[2025-11-26 13:51:46]     "exeErrorDiag": "",
[2025-11-26 13:51:46]     "pilotErrorCode": 0,
[2025-11-26 13:51:46]     "pilotErrorDiag": "",
[2025-11-26 13:51:46]  *** Listing of results directory ***
[2025-11-26 13:51:46] total 1334224
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:06 queuedata.json
[2025-11-26 13:51:46] -rwx------. 1 boincer umatlas     36292 Nov 24 12:07 runpilot2-wrapper.sh
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas       100 Nov 25 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:51:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 11:22 run_atlas
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas       105 Nov 25 11:22 job.xml
[2025-11-26 13:51:46] -rw-r--r--. 2 boincer umatlas 408610196 Nov 25 11:22 EVNT.47483658._001400.pool.root.1
[2025-11-26 13:51:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:22 start_atlas.sh
[2025-11-26 13:51:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 11:22 shared
[2025-11-26 13:51:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 11:22 input.tar.gz
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas         0 Nov 25 11:22 boinc_lockfile
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 11:22 pandaJob.out
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas        57 Nov 25 11:22 setup.sh.local
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas    991543 Nov 25 11:23 agis_schedconf.cvmfs.json
[2025-11-26 13:51:46] drwx------. 5 boincer umatlas      4096 Nov 25 11:23 pilot3
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:39 boinc_task_state.xml
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas      6880 Nov 26 13:47 init_data.xml
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas 925899957 Nov 26 13:50 HITS.47556149._003870.pool.root.1
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas      1061 Nov 26 13:50 memory_monitor_summary.json
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:50 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas   2515755 Nov 26 13:50 log.47556149._003870.job.log.tgz.1
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas      8633 Nov 26 13:51 heartbeat.json
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas        95 Nov 26 13:51 pilot_heartbeat.json
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas       822 Nov 26 13:51 pilotlog.txt
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:51 wrapper_checkpoint.txt
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas  11393674 Nov 26 13:51 log.47556149._003870.job.log.1
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas       353 Nov 26 13:51 output.list
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:51 boinc_mmap_file
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:51 runtime_log
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas  13926400 Nov 26 13:51 result.tar.gz
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 13:51 runtime_log.err
[2025-11-26 13:51:46] -rw-------. 1 boincer umatlas       662 Nov 26 13:51 gjONDm9Cph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWnLKDmuEHrPo.diag
[2025-11-26 13:51:46] -rw-r--r--. 1 boincer umatlas     21120 Nov 26 13:51 stderr.txt
[2025-11-26 13:51:47] HITS file was successfully produced:
[2025-11-26 13:51:47] -rw-------. 1 boincer umatlas 925899957 Nov 26 13:50 shared/HITS.pool.root.1
[2025-11-26 13:51:47]  *** Contents of shared directory: ***
[2025-11-26 13:51:47] total 1317440
[2025-11-26 13:51:47] -rw-r--r--. 2 boincer umatlas 408610196 Nov 25 11:22 ATLAS.root_0
[2025-11-26 13:51:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:22 start_atlas.sh
[2025-11-26 13:51:47] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 11:22 input.tar.gz
[2025-11-26 13:51:47] -rw-------. 1 boincer umatlas 925899957 Nov 26 13:50 HITS.pool.root.1
[2025-11-26 13:51:47] -rw-------. 1 boincer umatlas  13926400 Nov 26 13:51 result.tar.gz
13:51:48 (637285): run_atlas exited; CPU time 274115.842033
13:51:48 (637285): called boinc_finish(0)

</stderr_txt>
]]>

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