Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:54 (28474): wrapper (7.7.26015): starting
10:43:54 (28474): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 10:43:54] Arguments: --nthreads 8
[2025-11-25 10:43:54] Threads: 8
[2025-11-25 10:43:54] Checking for CVMFS
[2025-11-25 10:43:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:43:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:43:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:43:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:43:55] 2.11.2.0 6491 7702 74940 153287 0 82 11560240 18432001 1885 130560 0 6903185 99.992 274127 16528 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 10:43:55] CVMFS is ok
[2025-11-25 10:43:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:43:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:43:55] Further information can be found at the LHC@home message board.
[2025-11-25 10:43:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:43:55] Checking for apptainer binary...
[2025-11-25 10:43:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:43:55] Running /usr/bin/apptainer --version
[2025-11-25 10:43:55] apptainer version 1.3.2-1.el7
[2025-11-25 10:43:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:43:56] c-206-29.aglt2.org
[2025-11-25 10:43:56] apptainer works
[2025-11-25 10:43:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 10:43:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 10:43:56] Starting ATLAS job with PandaID=6895385445
[2025-11-25 10:43:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:43:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:43:21] 2025-11-26 11:42:47,179 | INFO     | monitor loop #5127: job 0:6895385445 is in state 'finished'
[2025-11-26 06:43:21] 2025-11-26 11:42:47,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:43:21] 2025-11-26 11:42:48,341 | INFO     | time since job start (71920s) is within the limit (172800.0s)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,127 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 06:43:21] 2025-11-26 11:42:49,132 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2472.3333333333335
[2025-11-26 06:43:21] 2025-11-26 11:42:49,135 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895385445/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,136 | INFO     | extracted standard info from prmon json
[2025-11-26 06:43:21] 2025-11-26 11:42:49,136 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:43:21] 2025-11-26 11:42:49,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:43:21] 2025-11-26 11:42:49,152 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:43:21] 2025-11-26 11:42:49,153 | INFO     | sum of square deviations: 508181811239.11633
[2025-11-26 06:43:21] 2025-11-26 11:42:49,179 | INFO     | sum of deviations: 2280572141858.8057
[2025-11-26 06:43:21] 2025-11-26 11:42:49,179 | INFO     | mean x: 1764121402.653096
[2025-11-26 06:43:21] 2025-11-26 11:42:49,179 | INFO     | mean y: 2868805.3418150977
[2025-11-26 06:43:21] 2025-11-26 11:42:49,179 | INFO     | intersect: -7913994877.633411
[2025-11-26 06:43:21] 2025-11-26 11:42:49,180 | INFO     | chi2: 5.5143418122523995
[2025-11-26 06:43:21] 2025-11-26 11:42:49,181 | INFO     | sum of square deviations: 501743999794.4747
[2025-11-26 06:43:21] 2025-11-26 11:42:49,211 | INFO     | sum of deviations: 2635250190792.599
[2025-11-26 06:43:21] 2025-11-26 11:42:49,212 | INFO     | mean x: 1764121250.1558774
[2025-11-26 06:43:21] 2025-11-26 11:42:49,212 | INFO     | mean y: 2877202.521294719
[2025-11-26 06:43:21] 2025-11-26 11:42:49,212 | INFO     | intersect: -9262606516.185547
[2025-11-26 06:43:21] 2025-11-26 11:42:49,214 | INFO     | chi2: 2.8627556613685834
[2025-11-26 06:43:21] 2025-11-26 11:42:49,214 | INFO     | current chi2=2.8627556613685834 (change=48.085270031542414 %)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,216 | INFO     | sum of square deviations: 495360794024.815
[2025-11-26 06:43:21] 2025-11-26 11:42:49,251 | INFO     | sum of deviations: 2766661010827.936
[2025-11-26 06:43:21] 2025-11-26 11:42:49,251 | INFO     | mean x: 1764121097.6586826
[2025-11-26 06:43:21] 2025-11-26 11:42:49,251 | INFO     | mean y: 2880340.671514115
[2025-11-26 06:43:21] 2025-11-26 11:42:49,251 | INFO     | intersect: -9849988756.245266
[2025-11-26 06:43:21] 2025-11-26 11:42:49,252 | INFO     | chi2: 2.3976265602966573
[2025-11-26 06:43:21] 2025-11-26 11:42:49,252 | INFO     | current chi2=2.3976265602966573 (change=16.247600427399526 %)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,252 | INFO     | right removable region: 1168
[2025-11-26 06:43:21] 2025-11-26 11:42:49,253 | INFO     | sum of square deviations: 501743530094.47473
[2025-11-26 06:43:21] 2025-11-26 11:42:49,287 | INFO     | sum of deviations: 1972506647827.1611
[2025-11-26 06:43:21] 2025-11-26 11:42:49,287 | INFO     | mean x: 1764121555.1558774
[2025-11-26 06:43:21] 2025-11-26 11:42:49,288 | INFO     | mean y: 2876094.4471890973
[2025-11-26 06:43:21] 2025-11-26 11:42:49,288 | INFO     | intersect: -6932423090.10821
[2025-11-26 06:43:21] 2025-11-26 11:42:49,289 | INFO     | chi2: 3.4491789525104988
[2025-11-26 06:43:21] 2025-11-26 11:42:49,290 | INFO     | current chi2=3.4491789525104988 (change=37.45075894920558 %)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,291 | INFO     | sum of square deviations: 495360069833.7584
[2025-11-26 06:43:21] 2025-11-26 11:42:49,336 | INFO     | sum of deviations: 1895525053613.4377
[2025-11-26 06:43:21] 2025-11-26 11:42:49,342 | INFO     | mean x: 1764121707.6561162
[2025-11-26 06:43:21] 2025-11-26 11:42:49,342 | INFO     | mean y: 2877933.1976047903
[2025-11-26 06:43:21] 2025-11-26 11:42:49,343 | INFO     | intersect: -6747639716.736727
[2025-11-26 06:43:21] 2025-11-26 11:42:49,344 | INFO     | chi2: 3.397729365841561
[2025-11-26 06:43:21] 2025-11-26 11:42:49,344 | INFO     | current chi2=3.397729365841561 (change=1.4916473565829325 %)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,345 | INFO     | left removable region: 20
[2025-11-26 06:43:21] 2025-11-26 11:42:49,346 | INFO     | sum of square deviations: 469141206535.8637
[2025-11-26 06:43:21] 2025-11-26 11:42:49,392 | INFO     | sum of deviations: 2282374968357.7437
[2025-11-26 06:43:21] 2025-11-26 11:42:49,393 | INFO     | mean x: 1764121677.162021
[2025-11-26 06:43:21] 2025-11-26 11:42:49,393 | INFO     | mean y: 2892477.7648083623
[2025-11-26 06:43:21] 2025-11-26 11:42:49,393 | INFO     | intersect: -8579570757.180379
[2025-11-26 06:43:21] 2025-11-26 11:42:49,394 | INFO     | chi2: 0.22885113008408461
[2025-11-26 06:43:21] 2025-11-26 11:42:49,395 | INFO     | current memory leak: 4.87 B/s (using 1148 data points, chi2=0.23)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,396 | INFO     | could have reported an average CPU frequency of 2629 MHz (43 samples)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,396 | INFO     | ..............................
[2025-11-26 06:43:21] 2025-11-26 11:42:49,396 | INFO     | . Timing measurements:
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . get job = 0 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . initial setup = 2 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . payload setup = 5 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . stage-in = 0 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . payload execution = 71886 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,397 | INFO     | . stage-out = 4 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,398 | INFO     | . log creation = 0 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,398 | INFO     | ..............................
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | 
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | job summary report
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | --------------------------------------------------
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | PanDA job id: 6895385445
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | task id: 47556149
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | errors: (none)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | pilot state: finished 
[2025-11-26 06:43:21] 2025-11-26 11:42:49,526 | INFO     | transexitcode: 0
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | exeerrorcode: 0
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | exeerrordiag: 
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | exitcode: 0
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | exitmsg: OK
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | cpuconsumptiontime: 553908 s
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | nevents: 1000
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | neventsw: 0
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | pid: 6532
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | pgrp: 6532
[2025-11-26 06:43:21] 2025-11-26 11:42:49,527 | INFO     | corecount: 8
[2025-11-26 06:43:21] 2025-11-26 11:42:49,528 | INFO     | event service: False
[2025-11-26 06:43:21] 2025-11-26 11:42:49,528 | INFO     | sizes: {0: 2284144, 1: 2284343, 4: 2284605, 12: 2284633, 71895: 2342714, 71899: 2351708, 71900: 2351892, 71907: 2352138}
[2025-11-26 06:43:21] 2025-11-26 11:42:49,528 | INFO     | --------------------------------------------------
[2025-11-26 06:43:21] 2025-11-26 11:42:49,528 | INFO     | 
[2025-11-26 06:43:21] 2025-11-26 11:42:49,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | job 6895385445 has completed (purged errors)
[2025-11-26 06:43:21] 2025-11-26 11:42:49,550 | INFO     | overall cleanup function is called
[2025-11-26 06:43:21] 2025-11-26 11:42:50,563 | INFO     | --- collectZombieJob: --- 10, [6532]
[2025-11-26 06:43:21] 2025-11-26 11:42:50,563 | INFO     | zombie collector waiting for pid 6532
[2025-11-26 06:43:21] 2025-11-26 11:42:50,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:43:21] 2025-11-26 11:42:50,563 | INFO     | collected zombie processes
[2025-11-26 06:43:21] 2025-11-26 11:42:50,564 | INFO     | will attempt to kill all subprocesses of pid=6532
[2025-11-26 06:43:21] 2025-11-26 11:42:50,733 | INFO     | process IDs to be killed: [6532] (in reverse order)
[2025-11-26 06:43:21] 2025-11-26 11:42:50,818 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:43:21] 2025-11-26 11:42:50,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:43:21] 2025-11-26 11:42:50,821 | INFO     | did not find any defunct processes belonging to 6532
[2025-11-26 06:43:21] 2025-11-26 11:42:50,824 | INFO     | did not find any defunct processes belonging to 6532
[2025-11-26 06:43:21] 2025-11-26 11:42:50,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:43:21] 2025-11-26 11:42:50,825 | INFO     | ready for new job
[2025-11-26 06:43:21] 2025-11-26 11:42:50,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:43:21] 2025-11-26 11:42:50,829 | INFO     | ***************************************
[2025-11-26 06:43:21] 2025-11-26 11:42:50,829 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:43:21] 2025-11-26 11:42:50,829 | INFO     | ***************************************
[2025-11-26 06:43:21] 2025-11-26 11:42:50,829 | INFO     | 
[2025-11-26 06:43:21] 2025-11-26 11:42:50,830 | INFO     | architecture information:
[2025-11-26 06:43:21] 2025-11-26 11:42:50,831 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:43:21] 2025-11-26 11:42:50,842 | INFO     | cat /etc/os-release:
[2025-11-26 06:43:21] NAME="CentOS Linux"
[2025-11-26 06:43:21] VERSION="7 (Core)"
[2025-11-26 06:43:21] ID="centos"
[2025-11-26 06:43:21] ID_LIKE="rhel fedora"
[2025-11-26 06:43:21] VERSION_ID="7"
[2025-11-26 06:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:43:21] ANSI_COLOR="0;31"
[2025-11-26 06:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:43:21] HOME_URL="https://www.centos.org/"
[2025-11-26 06:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:43:21] 
[2025-11-26 06:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:43:21] 
[2025-11-26 06:43:21] 2025-11-26 11:42:50,843 | INFO     | ***************************************
[2025-11-26 06:43:21] 2025-11-26 11:42:51,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 06:43:21] 2025-11-26 11:42:51,365 | INFO     | sufficient remaining disk space (25785532416 B)
[2025-11-26 06:43:21] 2025-11-26 11:42:51,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:43:21] 2025-11-26 11:42:51,366 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:43:21] 2025-11-26 11:42:51,366 | INFO     | update_server=False
[2025-11-26 06:43:21] 2025-11-26 11:42:51,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:43:21] 2025-11-26 11:42:51,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:43:21] 2025-11-26 11:42:51,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:43:21] 2025-11-26 11:42:51,367 | INFO     | aborting loop
[2025-11-26 06:43:21] 2025-11-26 11:42:51,699 | INFO     | all data control threads have been joined
[2025-11-26 06:43:21] 2025-11-26 11:42:52,336 | INFO     | all job control threads have been joined
[2025-11-26 06:43:21] 2025-11-26 11:42:52,372 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,373 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,373 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,421 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,437 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,518 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,613 | INFO     | all payload control threads have been joined
[2025-11-26 06:43:21] 2025-11-26 11:42:52,705 | INFO     | [data] control thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:52,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:43:21] 2025-11-26 11:42:53,200 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:53,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:43:21] 2025-11-26 11:42:53,342 | INFO     | [job] control thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:53,465 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:53,466 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:53,616 | INFO     | [payload] control thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:53,862 | INFO     | [job] validate thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:54,868 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:42:57,301 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:43:21] 2025-11-26 11:43:07,365 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:43:21] 2025-11-26 11:43:08,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863349106496)>', '<ExcThread(monitor, started 139862766241536)>']
[2025-11-26 06:43:21] 2025-11-26 11:43:13,982 | INFO     | all workflow threads have been joined
[2025-11-26 06:43:21] 2025-11-26 11:43:13,982 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:43:21] 2025-11-26 11:43:13,982 | INFO     | traces error code: 0
[2025-11-26 06:43:21] 2025-11-26 11:43:13,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:43:21] 2025-11-26 11:43:21,581 | INFO     | PID=32441 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:43:21] 2025-11-26 11:43:21,582 | INFO     | .. there are 3 such processes running
[2025-11-26 06:43:21] 2025-11-26 11:43:21,582 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:43:21] 2025-11-26 11:43:21,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:43:21] 2025-11-26 11:43:21,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:43:21] 2025-11-26 11:43:21,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:43:21] 2025-11-26 11:43:21,583 | INFO     | [monitor] control thread has ended
[2025-11-26 06:43:21] 2025-11-26 11:43:21,700 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:43:21] 2025-11-26 11:43:21,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:43:21] 2025-11-26 11:43:21,706 [wrapper] pilotpid: 32441
[2025-11-26 06:43:21] 2025-11-26 11:43:21,709 [wrapper] Pilot exit status: 0
[2025-11-26 06:43:21] 2025-11-26 11:43:21,720 [wrapper] pandaids: 6895385445
[2025-11-26 06:43:21] 2025-11-26 11:43:21,763 [wrapper] cleanup supervisor_pilot 20468 32442
[2025-11-26 06:43:21] 2025-11-26 11:43:21,765 [wrapper] Test setup, not cleaning
[2025-11-26 06:43:21] 2025-11-26 11:43:21,768 [wrapper] apfmon messages muted
[2025-11-26 06:43:21] 2025-11-26 11:43:21,770 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:43:21] 2025-11-26 11:43:21,772 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:43:21]  *** Error codes and diagnostics ***
[2025-11-26 06:43:21]     "exeErrorCode": 0,
[2025-11-26 06:43:21]     "exeErrorDiag": "",
[2025-11-26 06:43:21]     "pilotErrorCode": 0,
[2025-11-26 06:43:21]     "pilotErrorDiag": "",
[2025-11-26 06:43:21]  *** Listing of results directory ***
[2025-11-26 06:43:21] total 1327792
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-26 06:43:21] -rwx------ 1 boincer umatlas     36292 Nov 24 00:17 runpilot2-wrapper.sh
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 00:17 queuedata.json
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas       100 Nov 25 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:43:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 10:43 run_atlas
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas       105 Nov 25 10:43 job.xml
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas 411554268 Nov 25 10:43 EVNT.47483658._001237.pool.root.1
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 10:43 start_atlas.sh
[2025-11-26 06:43:21] drwxrwx--x 2 boincer umatlas      4096 Nov 25 10:43 shared
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 10:43 input.tar.gz
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas         0 Nov 25 10:43 boinc_lockfile
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 10:43 pandaJob.out
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas        57 Nov 25 10:43 setup.sh.local
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas    991909 Nov 25 10:44 agis_schedconf.cvmfs.json
[2025-11-26 06:43:21] drwx------ 5 boincer umatlas      4096 Nov 25 10:44 pilot3
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas       533 Nov 26 06:29 boinc_task_state.xml
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 06:36 init_data.xml
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas 919664399 Nov 26 06:42 HITS.47556149._002238.pool.root.1
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas      1067 Nov 26 06:42 memory_monitor_summary.json
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas   1516240 Nov 26 06:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas   2332455 Nov 26 06:42 log.47556149._002238.job.log.tgz.1
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas      8661 Nov 26 06:42 heartbeat.json
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:43 boinc_mmap_file
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas        29 Nov 26 06:43 wrapper_checkpoint.txt
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas        95 Nov 26 06:43 pilot_heartbeat.json
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas       820 Nov 26 06:43 pilotlog.txt
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas   9925084 Nov 26 06:43 log.47556149._002238.job.log.1
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas       353 Nov 26 06:43 output.list
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:43 runtime_log
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas  12277760 Nov 26 06:43 result.tar.gz
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas       668 Nov 26 06:43 RXeMDm67dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmETLKDm0RLKnm.diag
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 06:43 runtime_log.err
[2025-11-26 06:43:21] -rw-r--r-- 1 boincer umatlas     21299 Nov 26 06:43 stderr.txt
[2025-11-26 06:43:21] HITS file was successfully produced:
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas 919664399 Nov 26 06:42 shared/HITS.pool.root.1
[2025-11-26 06:43:21]  *** Contents of shared directory: ***
[2025-11-26 06:43:21] total 1312620
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas 411554268 Nov 25 10:43 ATLAS.root_0
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 10:43 start_atlas.sh
[2025-11-26 06:43:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 10:43 input.tar.gz
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas 919664399 Nov 26 06:42 HITS.pool.root.1
[2025-11-26 06:43:21] -rw------- 1 boincer umatlas  12277760 Nov 26 06:43 result.tar.gz
06:43:23 (28474): run_atlas exited; CPU time 552511.123725
06:43:23 (28474): called boinc_finish(0)

</stderr_txt>
]]>

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