Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:32 (1949651): wrapper (7.7.26015): starting
13:48:32 (1949651): wrapper: running run_atlas (--nthreads 3)
[2025-11-29 13:48:32] Arguments: --nthreads 3
[2025-11-29 13:48:32] Threads: 3
[2025-11-29 13:48:32] Checking for CVMFS
[2025-11-29 13:48:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 13:48:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 13:48:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 13:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 13:48:32] 2.9.2.0 1572593 2839 79420 153443 1 81 34651545 36864001 0 130560 0 1040400 99.980 104359 4112 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-29 13:48:32] CVMFS is ok
[2025-11-29 13:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 13:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 13:48:32] Further information can be found at the LHC@home message board.
[2025-11-29 13:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 13:48:32] Checking for apptainer binary...
[2025-11-29 13:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 13:48:32] Running /usr/bin/apptainer --version
[2025-11-29 13:48:32] apptainer version 1.4.1-1.1
[2025-11-29 13:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 13:48:33] thA385
[2025-11-29 13:48:33] apptainer works
[2025-11-29 13:48:33] Set ATHENA_PROC_NUMBER=3
[2025-11-29 13:48:33] Set ATHENA_CORE_NUMBER=3
[2025-11-29 13:48:33] Starting ATLAS job with PandaID=6895883560
[2025-11-29 13:48:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 21:50:35]  *** The last 200 lines of the pilot log: ***
[2025-11-29 21:50:35] 2025-11-29 20:50:04,622 | INFO     | executing command: cat /etc/os-release
[2025-11-29 21:50:35] 2025-11-29 20:50:04,631 | INFO     | cat /etc/os-release:
[2025-11-29 21:50:35] NAME="CentOS Linux"
[2025-11-29 21:50:35] VERSION="7 (Core)"
[2025-11-29 21:50:35] ID="centos"
[2025-11-29 21:50:35] ID_LIKE="rhel fedora"
[2025-11-29 21:50:35] VERSION_ID="7"
[2025-11-29 21:50:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 21:50:35] ANSI_COLOR="0;31"
[2025-11-29 21:50:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 21:50:35] HOME_URL="https://www.centos.org/"
[2025-11-29 21:50:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 21:50:35] 
[2025-11-29 21:50:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 21:50:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 21:50:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 21:50:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 21:50:35] 
[2025-11-29 21:50:35] 2025-11-29 20:50:04,632 | INFO     | ***************************************
[2025-11-29 21:50:35] 2025-11-29 20:50:05,133 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | INFO     | sufficient remaining disk space (366809710592 B)
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | INFO     | update_server=False
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | INFO     | aborting loop
[2025-11-29 21:50:35] 2025-11-29 20:50:05,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 21:50:35] 2025-11-29 20:50:05,181 | INFO     | all data control threads have been joined
[2025-11-29 21:50:35] 2025-11-29 20:50:05,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 21:50:35] 2025-11-29 20:50:05,774 | INFO     | all job control threads have been joined
[2025-11-29 21:50:35] 2025-11-29 20:50:05,833 | INFO     | all payload control threads have been joined
[2025-11-29 21:50:35] 2025-11-29 20:50:06,153 | INFO     | [job] job monitor thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,153 | INFO     | [job] retrieve thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,153 | INFO     | [job] queue monitor thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,185 | INFO     | [job] validate thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,187 | INFO     | [data] control thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,280 | INFO     | [payload] failed_post thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,485 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,763 | INFO     | [payload] validate_post thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,779 | INFO     | [job] control thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,838 | INFO     | [payload] control thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:06,926 | INFO     | [data] copytool_in thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:07,095 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:07,323 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:07,393 | INFO     | [data] copytool_out thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:07,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 21:50:35] 2025-11-29 20:50:11,919 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:12,018 | INFO     | [monitor] cgroup control has ended
[2025-11-29 21:50:35] 2025-11-29 20:50:15,770 | INFO     | job.realtimelogging is not enabled
[2025-11-29 21:50:35] 2025-11-29 20:50:16,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 21:50:35] 2025-11-29 20:50:17,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460321134400)>', '<ExcThread(monitor, started 140459833804544)>']
[2025-11-29 21:50:35] 2025-11-29 20:50:22,036 | INFO     | all workflow threads have been joined
[2025-11-29 21:50:35] 2025-11-29 20:50:22,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 21:50:35] 2025-11-29 20:50:22,036 | INFO     | traces error code: 0
[2025-11-29 21:50:35] 2025-11-29 20:50:22,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | INFO     | PID=1953369 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 21:50:35] 2025-11-29 20:50:34,932 | INFO     | [monitor] control thread has ended
[2025-11-29 21:50:35] 2025-11-29 20:50:34,979 [wrapper] ==== pilot stdout END ====
[2025-11-29 21:50:35] 2025-11-29 20:50:34,981 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 21:50:35] 2025-11-29 20:50:34,984 [wrapper] pilotpid: 1953369
[2025-11-29 21:50:35] 2025-11-29 20:50:34,987 [wrapper] Pilot exit status: 0
[2025-11-29 21:50:35] 2025-11-29 20:50:34,994 [wrapper] pandaids: 6895883560
[2025-11-29 21:50:35] 2025-11-29 20:50:35,011 [wrapper] cleanup supervisor_pilot 2010856 1953370
[2025-11-29 21:50:35] 2025-11-29 20:50:35,014 [wrapper] Test setup, not cleaning
[2025-11-29 21:50:35] 2025-11-29 20:50:35,016 [wrapper] apfmon messages muted
[2025-11-29 21:50:35] 2025-11-29 20:50:35,018 [wrapper] ==== wrapper stdout END ====
[2025-11-29 21:50:35] 2025-11-29 20:50:35,021 [wrapper] ==== wrapper stderr END ====
[2025-11-29 21:50:35]  *** Error codes and diagnostics ***
[2025-11-29 21:50:35]     "exeErrorCode": 0,
[2025-11-29 21:50:35]     "exeErrorDiag": "",
[2025-11-29 21:50:35]     "pilotErrorCode": 0,
[2025-11-29 21:50:35]     "pilotErrorDiag": "",
[2025-11-29 21:50:35]  *** Listing of results directory ***
[2025-11-29 21:50:35] total 1310400
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc    576529 Nov 24 17:06 pilot3.tar.gz
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      5112 Nov 24 17:52 queuedata.json
[2025-11-29 21:50:35] -rwx------ 1 boinc boinc     36292 Nov 24 17:53 runpilot2-wrapper.sh
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc       100 Nov 29 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 21:50:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 13:48 run_atlas
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc       105 Nov 29 13:48 job.xml
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc 409618145 Nov 29 13:48 EVNT.47483658._001392.pool.root.1
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc    590108 Nov 29 13:48 input.tar.gz
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc     15847 Nov 29 13:48 start_atlas.sh
[2025-11-29 21:50:35] drwxrwx--x 2 boinc boinc      4096 Nov 29 13:48 shared
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc         0 Nov 29 13:48 boinc_setup_complete
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      6447 Nov 29 13:48 init_data.xml
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc         0 Nov 29 13:48 boinc_lockfile
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      2786 Nov 29 13:48 pandaJob.out
[2025-11-29 21:50:35] -rw------- 1 boinc boinc    991834 Nov 29 13:48 agis_schedconf.cvmfs.json
[2025-11-29 21:50:35] drwx------ 5 boinc boinc      4096 Nov 29 13:48 pilot3
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc       531 Nov 29 21:45 boinc_task_state.xml
[2025-11-29 21:50:35] -rw------- 1 boinc boinc 917857109 Nov 29 21:49 HITS.47556149._003788.pool.root.1
[2025-11-29 21:50:35] -rw------- 1 boinc boinc      1043 Nov 29 21:49 memory_monitor_summary.json
[2025-11-29 21:50:35] -rw------- 1 boinc boinc   1516240 Nov 29 21:49 agis_ddmendpoints.agis.ALL.json
[2025-11-29 21:50:35] -rw------- 1 boinc boinc   1171355 Nov 29 21:49 log.47556149._003788.job.log.tgz.1
[2025-11-29 21:50:35] -rw------- 1 boinc boinc        95 Nov 29 21:50 pilot_heartbeat.json
[2025-11-29 21:50:35] -rw------- 1 boinc boinc      8562 Nov 29 21:50 heartbeat.json
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      8192 Nov 29 21:50 boinc_mmap_file
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc        28 Nov 29 21:50 wrapper_checkpoint.txt
[2025-11-29 21:50:35] -rw------- 1 boinc boinc       747 Nov 29 21:50 pilotlog.txt
[2025-11-29 21:50:35] -rw------- 1 boinc boinc   4065035 Nov 29 21:50 log.47556149._003788.job.log.1
[2025-11-29 21:50:35] -rw------- 1 boinc boinc       353 Nov 29 21:50 output.list
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc       620 Nov 29 21:50 runtime_log
[2025-11-29 21:50:35] -rw------- 1 boinc boinc   5253120 Nov 29 21:50 result.tar.gz
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      8898 Nov 29 21:50 runtime_log.err
[2025-11-29 21:50:35] -rw------- 1 boinc boinc       665 Nov 29 21:50 gbMODm2zoh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm77IKDmC2Pqsm.diag
[2025-11-29 21:50:35] -rw-r--r-- 1 boinc boinc      8979 Nov 29 21:50 stderr.txt
[2025-11-29 21:50:35] HITS file was successfully produced:
[2025-11-29 21:50:35] -rw------- 1 boinc boinc 917857109 Nov 29 21:49 shared/HITS.pool.root.1
[2025-11-29 21:50:35]  *** Contents of shared directory: ***
[2025-11-29 21:50:35] total 1302104
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc 409618145 Nov 29 13:48 ATLAS.root_0
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc    590108 Nov 29 13:48 input.tar.gz
[2025-11-29 21:50:35] -rw-r--r-- 2 boinc boinc     15847 Nov 29 13:48 start_atlas.sh
[2025-11-29 21:50:35] -rw------- 1 boinc boinc 917857109 Nov 29 21:49 HITS.pool.root.1
[2025-11-29 21:50:35] -rw------- 1 boinc boinc   5253120 Nov 29 21:50 result.tar.gz
21:50:36 (1949651): run_atlas exited; CPU time 85174.935941
21:50:36 (1949651): called boinc_finish(0)

</stderr_txt>
]]>

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