Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:10:20 (1396272): wrapper (7.7.26015): starting
04:10:20 (1396272): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 04:10:20] Arguments: --nthreads 4
[2025-11-26 04:10:20] Threads: 4
[2025-11-26 04:10:20] Checking for CVMFS
[2025-11-26 04:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:10:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:10:20] 2.13.3.0 6033 6511 82908 153305 1 81 2678192 4097024 0 130560 3 2415047 99.981 241057 8050 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 04:10:20] CVMFS is ok
[2025-11-26 04:10:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:10:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:10:20] Further information can be found at the LHC@home message board.
[2025-11-26 04:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:10:20] Checking for apptainer binary...
[2025-11-26 04:10:20] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-26 04:10:20] apptainer is not installed, using version from CVMFS
[2025-11-26 04:10:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:10:23] pckeatlas07
[2025-11-26 04:10:23] apptainer works
[2025-11-26 04:10:23] Set ATHENA_PROC_NUMBER=4
[2025-11-26 04:10:23] Set ATHENA_CORE_NUMBER=4
[2025-11-26 04:10:23] Starting ATLAS job with PandaID=6895882298
[2025-11-26 04:10:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:30:54]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:30:54] 2025-11-26 16:30:13,692 | INFO     | time since job start (47985s) is within the limit (172800.0s)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,318 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 17:30:54] 2025-11-26 16:30:14,318 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3744.5119999999997
[2025-11-26 17:30:54] 2025-11-26 16:30:14,319 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895882298/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,319 | INFO     | extracted standard info from prmon json
[2025-11-26 17:30:54] 2025-11-26 16:30:14,320 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:30:54] 2025-11-26 16:30:14,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:30:54] 2025-11-26 16:30:14,326 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:30:54] 2025-11-26 16:30:14,327 | INFO     | sum of square deviations: 151147831178.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,334 | INFO     | sum of deviations: 561780186676.9996
[2025-11-26 17:30:54] 2025-11-26 16:30:14,335 | INFO     | mean x: 1764150626.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,335 | INFO     | mean y: 2389588.994917408
[2025-11-26 17:30:54] 2025-11-26 16:30:14,335 | INFO     | intersect: -6554534584.356225
[2025-11-26 17:30:54] 2025-11-26 16:30:14,335 | INFO     | chi2: 3.447823248238357
[2025-11-26 17:30:54] 2025-11-26 16:30:14,336 | INFO     | sum of square deviations: 148285256575.5
[2025-11-26 17:30:54] 2025-11-26 16:30:14,336 | INFO     | monitor loop #3630: job 0:6895882298 is in state 'finished'
[2025-11-26 17:30:54] 2025-11-26 16:30:14,343 | INFO     | sum of deviations: 715533039996.0005
[2025-11-26 17:30:54] 2025-11-26 16:30:14,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,343 | INFO     | mean x: 1764150473.5
[2025-11-26 17:30:54] 2025-11-26 16:30:14,344 | INFO     | mean y: 2397765.2378516626
[2025-11-26 17:30:54] 2025-11-26 16:30:14,344 | INFO     | intersect: -8510302556.193833
[2025-11-26 17:30:54] 2025-11-26 16:30:14,344 | INFO     | chi2: 1.4681182075808685
[2025-11-26 17:30:54] 2025-11-26 16:30:14,344 | INFO     | current chi2=1.4681182075808685 (change=57.41898288054662 %)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,345 | INFO     | sum of square deviations: 145459054748.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | sum of deviations: 707284898766.0001
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | mean x: 1764150321.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | mean y: 2397320.149292149
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | intersect: -8575665306.19022
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | chi2: 1.4668601156666163
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | current chi2=1.4668601156666163 (change=0.08569418373505806 %)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,352 | INFO     | right removable region: 776
[2025-11-26 17:30:54] 2025-11-26 16:30:14,353 | INFO     | sum of square deviations: 148285256575.5
[2025-11-26 17:30:54] 2025-11-26 16:30:14,360 | INFO     | sum of deviations: 449565694803.00006
[2025-11-26 17:30:54] 2025-11-26 16:30:14,360 | INFO     | mean x: 1764150778.5
[2025-11-26 17:30:54] 2025-11-26 16:30:14,360 | INFO     | mean y: 2395550.5498721227
[2025-11-26 17:30:54] 2025-11-26 16:30:14,360 | INFO     | intersect: -5346090797.921293
[2025-11-26 17:30:54] 2025-11-26 16:30:14,361 | INFO     | chi2: 2.1550404310137417
[2025-11-26 17:30:54] 2025-11-26 16:30:14,361 | INFO     | current chi2=2.1550404310137417 (change=37.495623300444834 %)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,361 | INFO     | sum of square deviations: 145459054748.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,368 | INFO     | sum of deviations: 415132555774.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,368 | INFO     | mean x: 1764150931.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,368 | INFO     | mean y: 2397407.588159588
[2025-11-26 17:30:54] 2025-11-26 16:30:14,369 | INFO     | intersect: -5032397339.468871
[2025-11-26 17:30:54] 2025-11-26 16:30:14,369 | INFO     | chi2: 2.1129066689190936
[2025-11-26 17:30:54] 2025-11-26 16:30:14,369 | INFO     | current chi2=2.1129066689190936 (change=1.9551262931446767 %)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,369 | INFO     | left removable region: 20
[2025-11-26 17:30:54] 2025-11-26 16:30:14,370 | INFO     | sum of square deviations: 133980949305.0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,376 | INFO     | sum of deviations: 505236153839.0001
[2025-11-26 17:30:54] 2025-11-26 16:30:14,376 | INFO     | mean x: 1764150900.5
[2025-11-26 17:30:54] 2025-11-26 16:30:14,376 | INFO     | mean y: 2408345.275132275
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | intersect: -6650125618.573756
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | chi2: 0.08655988445020098
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | current memory leak: 3.77 B/s (using 756 data points, chi2=0.09)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | could have reported an average CPU frequency of 3705 MHz (30 samples)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | ..............................
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | . Timing measurements:
[2025-11-26 17:30:54] 2025-11-26 16:30:14,377 | INFO     | . get job = 0 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . initial setup = 1 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . payload setup = 8 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . stage-in = 0 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . payload execution = 47951 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . stage-out = 1 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | . log creation = 0 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,378 | INFO     | ..............................
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | 
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | job summary report
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | --------------------------------------------------
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | PanDA job id: 6895882298
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | task id: 47556149
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | errors: (none)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | pilot state: finished 
[2025-11-26 17:30:54] 2025-11-26 16:30:14,426 | INFO     | transexitcode: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | exeerrorcode: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | exeerrordiag: 
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | exitcode: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | exitmsg: OK
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | cpuconsumptiontime: 188929 s
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | nevents: 1000
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | neventsw: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | pid: 1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | pgrp: 1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | corecount: 4
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | event service: False
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | sizes: {0: 2284264, 2: 2284526, 11: 2284554, 47964: 2332759, 47966: 2341753, 47969: 2341809, 47973: 2342183}
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | --------------------------------------------------
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | 
[2025-11-26 17:30:54] 2025-11-26 16:30:14,427 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | job 6895882298 has completed (purged errors)
[2025-11-26 17:30:54] 2025-11-26 16:30:14,437 | INFO     | overall cleanup function is called
[2025-11-26 17:30:54] 2025-11-26 16:30:15,446 | INFO     | --- collectZombieJob: --- 10, [1407164]
[2025-11-26 17:30:54] 2025-11-26 16:30:15,447 | INFO     | zombie collector waiting for pid 1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:15,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:30:54] 2025-11-26 16:30:15,447 | INFO     | collected zombie processes
[2025-11-26 17:30:54] 2025-11-26 16:30:15,447 | INFO     | will attempt to kill all subprocesses of pid=1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:15,488 | INFO     | process IDs to be killed: [1407164] (in reverse order)
[2025-11-26 17:30:54] 2025-11-26 16:30:15,506 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:30:54] 2025-11-26 16:30:15,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:30:54] 2025-11-26 16:30:15,508 | INFO     | did not find any defunct processes belonging to 1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:15,509 | INFO     | did not find any defunct processes belonging to 1407164
[2025-11-26 17:30:54] 2025-11-26 16:30:15,510 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:30:54] 2025-11-26 16:30:15,510 | INFO     | ready for new job
[2025-11-26 17:30:54] 2025-11-26 16:30:15,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:30:54] 2025-11-26 16:30:15,511 | INFO     | ***************************************
[2025-11-26 17:30:54] 2025-11-26 16:30:15,511 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:30:54] 2025-11-26 16:30:15,511 | INFO     | ***************************************
[2025-11-26 17:30:54] 2025-11-26 16:30:15,511 | INFO     | 
[2025-11-26 17:30:54] 2025-11-26 16:30:15,512 | INFO     | architecture information:
[2025-11-26 17:30:54] 2025-11-26 16:30:15,512 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:30:54] 2025-11-26 16:30:15,550 | INFO     | cat /etc/os-release:
[2025-11-26 17:30:54] NAME="CentOS Linux"
[2025-11-26 17:30:54] VERSION="7 (Core)"
[2025-11-26 17:30:54] ID="centos"
[2025-11-26 17:30:54] ID_LIKE="rhel fedora"
[2025-11-26 17:30:54] VERSION_ID="7"
[2025-11-26 17:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:30:54] ANSI_COLOR="0;31"
[2025-11-26 17:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:30:54] HOME_URL="https://www.centos.org/"
[2025-11-26 17:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:30:54] 
[2025-11-26 17:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:30:54] 
[2025-11-26 17:30:54] 2025-11-26 16:30:15,550 | INFO     | ***************************************
[2025-11-26 17:30:54] 2025-11-26 16:30:16,052 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 17:30:54] 2025-11-26 16:30:16,060 | INFO     | sufficient remaining disk space (330440900608 B)
[2025-11-26 17:30:54] 2025-11-26 16:30:16,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:30:54] 2025-11-26 16:30:16,060 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:30:54] 2025-11-26 16:30:16,060 | INFO     | update_server=False
[2025-11-26 17:30:54] 2025-11-26 16:30:16,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:30:54] 2025-11-26 16:30:16,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:30:54] 2025-11-26 16:30:16,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:30:54] 2025-11-26 16:30:16,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:30:54] 2025-11-26 16:30:16,061 | INFO     | aborting loop
[2025-11-26 17:30:54] 2025-11-26 16:30:16,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:30:54] 2025-11-26 16:30:16,859 | INFO     | all data control threads have been joined
[2025-11-26 17:30:54] 2025-11-26 16:30:17,066 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,066 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,066 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,138 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,146 | INFO     | all payload control threads have been joined
[2025-11-26 17:30:54] 2025-11-26 16:30:17,314 | INFO     | all job control threads have been joined
[2025-11-26 17:30:54] 2025-11-26 16:30:17,598 | INFO     | [job] validate thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,598 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,616 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,708 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:17,864 | INFO     | [data] control thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:18,066 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:18,151 | INFO     | [payload] control thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:18,290 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:18,319 | INFO     | [job] control thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:18,423 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:20,181 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:26,395 | INFO     | job.realtimelogging is not enabled
[2025-11-26 17:30:54] 2025-11-26 16:30:27,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:30:54] 2025-11-26 16:30:46,882 | INFO     | PID=1399931 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:30:54] 2025-11-26 16:30:46,882 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:30:54] 2025-11-26 16:30:46,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:30:54] 2025-11-26 16:30:46,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:30:54] 2025-11-26 16:30:47,611 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:30:54] 2025-11-26 16:30:48,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476174456640)>', '<ExcThread(monitor, started 140475361130240)>']
[2025-11-26 17:30:54] 2025-11-26 16:30:48,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:30:54] 2025-11-26 16:30:48,893 | INFO     | [monitor] control thread has ended
[2025-11-26 17:30:54] 2025-11-26 16:30:53,282 | INFO     | all workflow threads have been joined
[2025-11-26 17:30:54] 2025-11-26 16:30:53,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:30:54] 2025-11-26 16:30:53,282 | INFO     | traces error code: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:53,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:30:54] 2025-11-26 16:30:53,803 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:30:54] 2025-11-26 16:30:53,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:30:54] 2025-11-26 16:30:53,805 [wrapper] pilotpid: 1399931
[2025-11-26 17:30:54] 2025-11-26 16:30:53,806 [wrapper] Pilot exit status: 0
[2025-11-26 17:30:54] 2025-11-26 16:30:53,833 [wrapper] pandaids: 6895882298
[2025-11-26 17:30:54] 2025-11-26 16:30:53,848 [wrapper] cleanup supervisor_pilot 1563780 1399932
[2025-11-26 17:30:54] 2025-11-26 16:30:53,849 [wrapper] Test setup, not cleaning
[2025-11-26 17:30:54] 2025-11-26 16:30:53,850 [wrapper] apfmon messages muted
[2025-11-26 17:30:54] 2025-11-26 16:30:53,851 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:30:54] 2025-11-26 16:30:53,852 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:30:54]  *** Error codes and diagnostics ***
[2025-11-26 17:30:54]     "exeErrorCode": 0,
[2025-11-26 17:30:54]     "exeErrorDiag": "",
[2025-11-26 17:30:54]     "pilotErrorCode": 0,
[2025-11-26 17:30:54]     "pilotErrorDiag": "",
[2025-11-26 17:30:54]  *** Listing of results directory ***
[2025-11-26 17:30:54] total 1309136
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc    576529 Nov 24 17:06 pilot3.tar.gz
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc      5112 Nov 24 17:21 queuedata.json
[2025-11-26 17:30:54] -rwx------ 1 boinc boinc     36292 Nov 24 17:23 runpilot2-wrapper.sh
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc       100 Nov 26 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:30:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 04:10 run_atlas
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc       105 Nov 26 04:10 job.xml
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc      6314 Nov 26 04:10 init_data.xml
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc 409301005 Nov 26 04:10 EVNT.47483658._001383.pool.root.1
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:10 start_atlas.sh
[2025-11-26 17:30:54] drwxrwx--x 2 boinc boinc        68 Nov 26 04:10 shared
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc    590105 Nov 26 04:10 input.tar.gz
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:10 boinc_lockfile
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc      2785 Nov 26 04:10 pandaJob.out
[2025-11-26 17:30:54] -rw------- 1 boinc boinc    991877 Nov 26 04:10 agis_schedconf.cvmfs.json
[2025-11-26 17:30:54] drwx------ 5 boinc boinc      4096 Nov 26 04:10 pilot3
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc       532 Nov 26 17:25 boinc_task_state.xml
[2025-11-26 17:30:54] -rw------- 1 boinc boinc 910834065 Nov 26 17:29 HITS.47556149._003694.pool.root.1
[2025-11-26 17:30:54] -rw------- 1 boinc boinc        95 Nov 26 17:29 pilot_heartbeat.json
[2025-11-26 17:30:54] -rw------- 1 boinc boinc      1035 Nov 26 17:30 memory_monitor_summary.json
[2025-11-26 17:30:54] -rw------- 1 boinc boinc   1516240 Nov 26 17:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:30:54] -rw------- 1 boinc boinc   1528729 Nov 26 17:30 log.47556149._003694.job.log.tgz.1
[2025-11-26 17:30:54] -rw------- 1 boinc boinc      8592 Nov 26 17:30 heartbeat.json
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:30 boinc_mmap_file
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc        29 Nov 26 17:30 wrapper_checkpoint.txt
[2025-11-26 17:30:54] -rw------- 1 boinc boinc      4821 Nov 26 17:30 pilotlog.txt
[2025-11-26 17:30:54] -rw------- 1 boinc boinc   6730159 Nov 26 17:30 log.47556149._003694.job.log.1
[2025-11-26 17:30:54] -rw------- 1 boinc boinc       353 Nov 26 17:30 output.list
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:30 runtime_log
[2025-11-26 17:30:54] -rw------- 1 boinc boinc   8273920 Nov 26 17:30 result.tar.gz
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc      8817 Nov 26 17:30 runtime_log.err
[2025-11-26 17:30:54] -rw------- 1 boinc boinc       660 Nov 26 17:30 8wLMDm8Woh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmP7IKDm3BmUSm.diag
[2025-11-26 17:30:54] -rw-r--r-- 1 boinc boinc     21373 Nov 26 17:30 stderr.txt
[2025-11-26 17:30:54] HITS file was successfully produced:
[2025-11-26 17:30:54] -rw------- 1 boinc boinc 910834065 Nov 26 17:29 shared/HITS.pool.root.1
[2025-11-26 17:30:54]  *** Contents of shared directory: ***
[2025-11-26 17:30:54] total 1297876
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc 409301005 Nov 26 04:10 ATLAS.root_0
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:10 start_atlas.sh
[2025-11-26 17:30:54] -rw-r--r-- 2 boinc boinc    590105 Nov 26 04:10 input.tar.gz
[2025-11-26 17:30:54] -rw------- 1 boinc boinc 910834065 Nov 26 17:29 HITS.pool.root.1
[2025-11-26 17:30:54] -rw------- 1 boinc boinc   8273920 Nov 26 17:30 result.tar.gz
17:30:55 (1396272): run_atlas exited; CPU time 189083.812657
17:30:55 (1396272): called boinc_finish(0)

</stderr_txt>
]]>

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