Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:38:18 (2320049): wrapper (7.7.26015): starting
06:38:18 (2320049): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 06:38:18] Arguments: --nthreads 8
[2025-11-25 06:38:18] Threads: 8
[2025-11-25 06:38:18] Checking for CVMFS
[2025-11-25 06:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:38:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:38:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:38:20] 2.11.3.0 52815 27074 201072 153285 2 704 44178010 45568000 16317 130560 0 162650381 99.805 91742417 24772 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 06:38:20] CVMFS is ok
[2025-11-25 06:38:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:38:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:38:20] Further information can be found at the LHC@home message board.
[2025-11-25 06:38:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:38:20] Checking for apptainer binary...
[2025-11-25 06:38:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:38:20] Running /usr/bin/apptainer --version
[2025-11-25 06:38:20] apptainer version 1.4.1-1.el9
[2025-11-25 06:38:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:38:20] wns0013.triumf.lcg
[2025-11-25 06:38:20] apptainer works
[2025-11-25 06:38:20] Set ATHENA_PROC_NUMBER=8
[2025-11-25 06:38:20] Set ATHENA_CORE_NUMBER=8
[2025-11-25 06:38:20] Starting ATLAS job with PandaID=6894238314
[2025-11-25 06:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:42:45]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | WARNING  | wrong length of table data, x=[1764081564.0], y=[2275.0] (must be same and length>=4)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . Timing measurements:
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . get job = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . initial setup = 3 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload setup = 14 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-in = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload execution = 30 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-out = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . log creation = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:42:45] 2025-11-25 14:42:01,559 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238314/pilotlog.txt
[2025-11-25 06:42:45] 2025-11-25 14:42:01,674 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 06:42:45] - Log from pilotlog.txt -
[2025-11-25 06:42:45] 2025-11-25 14:42:01,555 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894238314/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | INFO     | extracted standard info from prmon json
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | WARNING  | wrong length of table data, x=[1764081564.0], y=[2275.0] (must be same and length>=4)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . Timing measurements:
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . get job = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . initial setup = 3 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload setup = 14 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-in = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload execution = 30 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-out = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . log creation = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:42:45] 2025-11-25 14:42:01,559 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238314/pilotlog.txt
[2025-11-25 06:42:45] 2025-11-25 14:42:01,675 | WARNING  | 
[2025-11-25 06:42:45] [begin log extracts]
[2025-11-25 06:42:45] - Log from pilotlog.txt -
[2025-11-25 06:42:45] 2025-11-25 14:42:01,555 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894238314/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | INFO     | extracted standard info from prmon json
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 06:42:45] 2025-11-25 14:42:01,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | WARNING  | wrong length of table data, x=[1764081564.0], y=[2275.0] (must be same and length>=4)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,557 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . Timing measurements:
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . get job = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . initial setup = 3 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload setup = 14 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-in = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . payload execution = 30 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . stage-out = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | . log creation = 0 s
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | ..............................
[2025-11-25 06:42:45] 2025-11-25 14:42:01,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:42:45] 2025-11-25 14:42:01,559 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238314/pilotlog.txt
[2025-11-25 06:42:45] [end log extracts]
[2025-11-25 06:42:45] 2025-11-25 14:42:01,675 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-25 06:42:45] 2025-11-25 14:42:01,676 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 06:42:45] 2025-11-25 14:42:01,875 | INFO     | PID=2323725 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 06:42:45] 2025-11-25 14:42:01,875 | INFO     | .. there are 19 such processes running
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | 
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | job summary report
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | --------------------------------------------------
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | PanDA job id: 6894238314
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | task id: 47523675
[2025-11-25 06:42:45] 2025-11-25 14:42:02,268 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 06:39:41,516 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | pilot state: failed 
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | transexitcode: 65
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | exeerrorcode: 65
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | exitcode: 65
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | cpuconsumptiontime: 17 s
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | nevents: 0
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | neventsw: 0
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | pid: 2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | pgrp: 2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:02,269 | INFO     | corecount: 8
[2025-11-25 06:42:45] 2025-11-25 14:42:02,270 | INFO     | event service: False
[2025-11-25 06:42:45] 2025-11-25 14:42:02,270 | INFO     | sizes: {0: 2283947, 9: 2284209, 11: 2284237, 48: 2307359, 49: 2311651, 52: 2311679, 181: 2312033}
[2025-11-25 06:42:45] 2025-11-25 14:42:02,270 | INFO     | --------------------------------------------------
[2025-11-25 06:42:45] 2025-11-25 14:42:02,270 | INFO     | 
[2025-11-25 06:42:45] 2025-11-25 14:42:02,270 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 06:42:45] 2025-11-25 14:42:02,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | job 6894238314 has completed (purged errors)
[2025-11-25 06:42:45] 2025-11-25 14:42:02,420 | INFO     | overall cleanup function is called
[2025-11-25 06:42:45] 2025-11-25 14:42:03,427 | INFO     | --- collectZombieJob: --- 10, [2330334]
[2025-11-25 06:42:45] 2025-11-25 14:42:03,427 | INFO     | zombie collector waiting for pid 2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:03,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:42:45] 2025-11-25 14:42:03,427 | INFO     | collected zombie processes
[2025-11-25 06:42:45] 2025-11-25 14:42:03,427 | INFO     | will attempt to kill all subprocesses of pid=2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:03,754 | INFO     | process IDs to be killed: [2330334] (in reverse order)
[2025-11-25 06:42:45] 2025-11-25 14:42:04,061 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:42:45] 2025-11-25 14:42:04,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:42:45] 2025-11-25 14:42:04,093 | INFO     | did not find any defunct processes belonging to 2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:04,145 | INFO     | did not find any defunct processes belonging to 2330334
[2025-11-25 06:42:45] 2025-11-25 14:42:04,186 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:42:45] 2025-11-25 14:42:04,186 | INFO     | ready for new job
[2025-11-25 06:42:45] 2025-11-25 14:42:04,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:42:45] 2025-11-25 14:42:04,231 | INFO     | ***************************************
[2025-11-25 06:42:45] 2025-11-25 14:42:04,231 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:42:45] 2025-11-25 14:42:04,232 | INFO     | ***************************************
[2025-11-25 06:42:45] 2025-11-25 14:42:04,232 | INFO     | 
[2025-11-25 06:42:45] 2025-11-25 14:42:04,233 | INFO     | architecture information:
[2025-11-25 06:42:45] 2025-11-25 14:42:04,276 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:42:45] 2025-11-25 14:42:04,339 | INFO     | cat /etc/os-release:
[2025-11-25 06:42:45] NAME="CentOS Linux"
[2025-11-25 06:42:45] VERSION="7 (Core)"
[2025-11-25 06:42:45] ID="centos"
[2025-11-25 06:42:45] ID_LIKE="rhel fedora"
[2025-11-25 06:42:45] VERSION_ID="7"
[2025-11-25 06:42:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:42:45] ANSI_COLOR="0;31"
[2025-11-25 06:42:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:42:45] HOME_URL="https://www.centos.org/"
[2025-11-25 06:42:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:42:45] 
[2025-11-25 06:42:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:42:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:42:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:42:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:42:45] 
[2025-11-25 06:42:45] 2025-11-25 14:42:04,339 | INFO     | ***************************************
[2025-11-25 06:42:45] 2025-11-25 14:42:04,843 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 06:42:45] 2025-11-25 14:42:04,936 | INFO     | sufficient remaining disk space (1231349088256 B)
[2025-11-25 06:42:45] 2025-11-25 14:42:04,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:42:45] 2025-11-25 14:42:04,937 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:42:45] 2025-11-25 14:42:04,937 | INFO     | update_server=False
[2025-11-25 06:42:45] 2025-11-25 14:42:04,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:42:45] 2025-11-25 14:42:04,941 | INFO     | all job control threads have been joined
[2025-11-25 06:42:45] 2025-11-25 14:42:05,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:42:45] 2025-11-25 14:42:05,603 | INFO     | all data control threads have been joined
[2025-11-25 06:42:45] 2025-11-25 14:42:05,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:42:45] 2025-11-25 14:42:05,616 | INFO     | aborting loop
[2025-11-25 06:42:45] 2025-11-25 14:42:05,943 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:05,947 | INFO     | [job] control thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,243 | INFO     | [job] validate thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:42:45] 2025-11-25 14:42:06,448 | INFO     | all payload control threads have been joined
[2025-11-25 06:42:45] 2025-11-25 14:42:06,503 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,580 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,609 | INFO     | [data] control thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,622 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,791 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,816 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:42:45] 2025-11-25 14:42:06,846 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:06,981 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:07,374 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:07,454 | INFO     | [payload] control thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:07,850 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:08,385 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:09,507 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:42:45] 2025-11-25 14:42:34,161 | INFO     | PID=2323725 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 06:42:45] 2025-11-25 14:42:34,161 | INFO     | .. there are 19 such processes running
[2025-11-25 06:42:45] 2025-11-25 14:42:34,162 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:42:45] 2025-11-25 14:42:34,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:42:45] 2025-11-25 14:42:34,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:42:45] 2025-11-25 14:42:38,543 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:42:45] 2025-11-25 14:42:40,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159576815424)>', '<ExcThread(monitor, started 140159160915712)>']
[2025-11-25 06:42:45] 2025-11-25 14:42:40,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:42:45] 2025-11-25 14:42:40,200 | INFO     | [monitor] control thread has ended
[2025-11-25 06:42:45] 2025-11-25 14:42:45,078 | INFO     | all workflow threads have been joined
[2025-11-25 06:42:45] 2025-11-25 14:42:45,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:42:45] 2025-11-25 14:42:45,078 | INFO     | traces error code: 0
[2025-11-25 06:42:45] 2025-11-25 14:42:45,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:42:45] 2025-11-25 14:42:45,292 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:42:45] 2025-11-25 14:42:45,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:42:45] 2025-11-25 14:42:45,297 [wrapper] pilotpid: 2323725
[2025-11-25 06:42:45] 2025-11-25 14:42:45,298 [wrapper] Pilot exit status: 0
[2025-11-25 06:42:45] 2025-11-25 14:42:45,407 [wrapper] pandaids: 6894238314
[2025-11-25 06:42:45] 2025-11-25 14:42:45,441 [wrapper] cleanup supervisor_pilot 2323731 2323726
[2025-11-25 06:42:45] 2025-11-25 14:42:45,443 [wrapper] Test setup, not cleaning
[2025-11-25 06:42:45] 2025-11-25 14:42:45,445 [wrapper] apfmon messages muted
[2025-11-25 06:42:45] 2025-11-25 14:42:45,446 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:42:45] 2025-11-25 14:42:45,448 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:42:45]  *** Error codes and diagnostics ***
[2025-11-25 06:42:45]     "exeErrorCode": 65,
[2025-11-25 06:42:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-25 06:42:45]     "pilotErrorCode": 1305,
[2025-11-25 06:42:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-25 06:42:45]  *** Listing of results directory ***
[2025-11-25 06:42:45] total 279872
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc    576529 Nov 24 20:09 pilot3.tar.gz
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc      5112 Nov 24 20:38 queuedata.json
[2025-11-25 06:42:45] -rwx------. 1 boinc boinc     36292 Nov 24 20:38 runpilot2-wrapper.sh
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc       100 Nov 25 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:42:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 06:38 run_atlas
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc       105 Nov 25 06:38 job.xml
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc      6445 Nov 25 06:38 init_data.xml
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc 282444322 Nov 25 06:38 EVNT.47523673._000004.pool.root.1
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:38 start_atlas.sh
[2025-11-25 06:42:45] drwxrwx--x. 2 boinc boinc      4096 Nov 25 06:38 shared
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc    589942 Nov 25 06:38 input.tar.gz
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc         0 Nov 25 06:38 boinc_lockfile
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc      2613 Nov 25 06:38 pandaJob.out
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc    991909 Nov 25 06:38 agis_schedconf.cvmfs.json
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc   1516240 Nov 25 06:38 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:42:45] drwx------. 5 boinc boinc      4096 Nov 25 06:38 pilot3
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc       522 Nov 25 06:39 boinc_task_state.xml
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc       951 Nov 25 06:39 memory_monitor_summary.json
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc     21364 Nov 25 06:39 log.47523675._000094.job.log.tgz.1
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc        95 Nov 25 06:41 pilot_heartbeat.json
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc      8380 Nov 25 06:42 heartbeat.json
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc      8192 Nov 25 06:42 boinc_mmap_file
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc        22 Nov 25 06:42 wrapper_checkpoint.txt
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc      4823 Nov 25 06:42 pilotlog.txt
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc     91060 Nov 25 06:42 log.47523675._000094.job.log.1
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc       188 Nov 25 06:42 output.list
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc       620 Nov 25 06:42 runtime_log
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc    133120 Nov 25 06:42 result.tar.gz
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc      8634 Nov 25 06:42 runtime_log.err
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc       644 Nov 25 06:42 qgGKDmY0zh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbKJKDmKyCRom.diag
[2025-11-25 06:42:45] -rw-r--r--. 1 boinc boinc     22014 Nov 25 06:42 stderr.txt
[2025-11-25 06:42:45] No HITS result produced
[2025-11-25 06:42:45]  *** Contents of shared directory: ***
[2025-11-25 06:42:45] total 276560
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc 282444322 Nov 25 06:38 ATLAS.root_0
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:38 start_atlas.sh
[2025-11-25 06:42:45] -rw-r--r--. 2 boinc boinc    589942 Nov 25 06:38 input.tar.gz
[2025-11-25 06:42:45] -rw-------. 1 boinc boinc    133120 Nov 25 06:42 result.tar.gz
06:42:47 (2320049): run_atlas exited; CPU time 25.251772
06:42:47 (2320049): called boinc_finish(0)

</stderr_txt>
]]>

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