Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
08:16:44 (1027336): wrapper (7.7.26015): starting
08:16:44 (1027336): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 08:16:44] Arguments: --nthreads 12
[2025-11-26 08:16:44] Threads: 12
[2025-11-26 08:16:44] Checking for CVMFS
[2025-11-26 08:16:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:16:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:16:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:16:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:16:45] 2.13.0.0 557766 2503 93316 153314 0 81 4521814 6144001 0 130560 0 1587156 99.985 96765 934 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 08:16:45] CVMFS is ok
[2025-11-26 08:16:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:16:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 08:16:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 08:16:45] Further information can be found at the LHC@home message board.
[2025-11-26 08:16:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:16:45] Checking for apptainer binary...
[2025-11-26 08:16:45] apptainer is not installed, using version from CVMFS
[2025-11-26 08:16:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:16:45] Debian-bookworm-latest-amd64-base
[2025-11-26 08:16:45] apptainer works
[2025-11-26 08:16:45] Set ATHENA_PROC_NUMBER=12
[2025-11-26 08:16:45] Set ATHENA_CORE_NUMBER=12
[2025-11-26 08:16:45] Starting ATLAS job with PandaID=6895882714
[2025-11-26 08:16:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:09:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:09:25] 2025-11-26 11:08:52,679 | INFO     | monitor loop #1043: job 0:6895882714 is in state 'finished'
[2025-11-26 12:09:25] 2025-11-26 11:08:52,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,414 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:09:25] 2025-11-26 11:08:53,416 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3742.6405000000004
[2025-11-26 12:09:25] 2025-11-26 11:08:53,417 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895882714/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,417 | INFO     | extracted standard info from prmon json
[2025-11-26 12:09:25] 2025-11-26 11:08:53,417 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:09:25] 2025-11-26 11:08:53,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:09:25] 2025-11-26 11:08:53,419 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:09:25] 2025-11-26 11:08:53,419 | INFO     | sum of square deviations: 3674957725.627175
[2025-11-26 12:09:25] 2025-11-26 11:08:53,420 | INFO     | sum of deviations: 163707062813.09656
[2025-11-26 12:09:25] 2025-11-26 11:08:53,420 | INFO     | mean x: 1764148352.6535087
[2025-11-26 12:09:25] 2025-11-26 11:08:53,420 | INFO     | mean y: 3652341.254385965
[2025-11-26 12:09:25] 2025-11-26 11:08:53,420 | INFO     | intersect: -78583250350.30815
[2025-11-26 12:09:25] 2025-11-26 11:08:53,420 | INFO     | chi2: 3.3890015069363235
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | sum of square deviations: 3438443035.506704
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | sum of deviations: 206816672549.92386
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | mean x: 1764148200.1569507
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | mean y: 3679756.8878923766
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | intersect: -106106922301.59029
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | chi2: 1.881174839343
[2025-11-26 12:09:25] 2025-11-26 11:08:53,421 | INFO     | current chi2=1.881174839343 (change=44.49176739836883 %)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | sum of square deviations: 3212300632.8807354
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | sum of deviations: 196032303786.37595
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | mean x: 1764148047.6605504
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | mean y: 3672484.0321100918
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | intersect: -107654372489.48605
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | chi2: 1.8819451304054193
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | current chi2=1.8819451304054193 (change=-0.04094734026362276 %)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,422 | INFO     | right removable region: 217
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | sum of square deviations: 3438435470.816148
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | sum of deviations: 96202905722.78484
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | mean x: 1764148505.1524663
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | mean y: 3695555.3004484307
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | intersect: -49354861196.061424
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | chi2: 1.5836155473829514
[2025-11-26 12:09:25] 2025-11-26 11:08:53,423 | INFO     | current chi2=1.5836155473829514 (change=53.27191374386408 %)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | sum of square deviations: 3212285381.5046086
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | sum of deviations: 81998092508.2752
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | mean x: 1764148657.6513762
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | mean y: 3705119.5825688075
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | intersect: -45028665186.41154
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | chi2: 1.5678995788508763
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | current chi2=1.5678995788508763 (change=0.9924105985222864 %)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,424 | INFO     | left removable region: 20
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | sum of square deviations: 2370498707.4314785
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | sum of deviations: 95581230611.27408
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | mean x: 1764148627.1522841
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | mean y: 3742834.390862944
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | intersect: -71128756093.27588
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | chi2: 0.021371456487543943
[2025-11-26 12:09:25] 2025-11-26 11:08:53,425 | INFO     | current memory leak: 40.32 B/s (using 197 data points, chi2=0.02)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | could have reported an average CPU frequency of 3890 MHz (11 samples)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | ..............................
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . Timing measurements:
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . get job = 0 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . initial setup = 1 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . payload setup = 2 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . stage-in = 0 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . payload execution = 13896 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . stage-out = 1 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | . log creation = 0 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,426 | INFO     | ..............................
[2025-11-26 12:09:25] 2025-11-26 11:08:53,475 | INFO     | 
[2025-11-26 12:09:25] 2025-11-26 11:08:53,475 | INFO     | job summary report
[2025-11-26 12:09:25] 2025-11-26 11:08:53,475 | INFO     | --------------------------------------------------
[2025-11-26 12:09:25] 2025-11-26 11:08:53,475 | INFO     | PanDA job id: 6895882714
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | task id: 47556149
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | errors: (none)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | pilot state: finished 
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | transexitcode: 0
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | exeerrorcode: 0
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | exeerrordiag: 
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | exitcode: 0
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | exitmsg: OK
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | cpuconsumptiontime: 161163 s
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | nevents: 1000
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | neventsw: 0
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | pid: 1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | pgrp: 1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | corecount: 12
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | event service: False
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | sizes: {0: 2284322, 2: 2284584, 11: 2284612, 13902: 2316306, 13905: 2325370, 13910: 2325560}
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | --------------------------------------------------
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | 
[2025-11-26 12:09:25] 2025-11-26 11:08:53,476 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 12:09:25] 2025-11-26 11:08:53,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | job 6895882714 has completed (purged errors)
[2025-11-26 12:09:25] 2025-11-26 11:08:53,487 | INFO     | overall cleanup function is called
[2025-11-26 12:09:25] 2025-11-26 11:08:54,497 | INFO     | --- collectZombieJob: --- 10, [1037963]
[2025-11-26 12:09:25] 2025-11-26 11:08:54,497 | INFO     | zombie collector waiting for pid 1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:54,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:09:25] 2025-11-26 11:08:54,498 | INFO     | collected zombie processes
[2025-11-26 12:09:25] 2025-11-26 11:08:54,498 | INFO     | will attempt to kill all subprocesses of pid=1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:54,542 | INFO     | process IDs to be killed: [1037963] (in reverse order)
[2025-11-26 12:09:25] 2025-11-26 11:08:54,565 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:09:25] 2025-11-26 11:08:54,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:09:25] 2025-11-26 11:08:54,566 | INFO     | did not find any defunct processes belonging to 1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:54,567 | INFO     | did not find any defunct processes belonging to 1037963
[2025-11-26 12:09:25] 2025-11-26 11:08:54,568 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:09:25] 2025-11-26 11:08:54,568 | INFO     | ready for new job
[2025-11-26 12:09:25] 2025-11-26 11:08:54,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:09:25] 2025-11-26 11:08:54,569 | INFO     | ***************************************
[2025-11-26 12:09:25] 2025-11-26 11:08:54,569 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:09:25] 2025-11-26 11:08:54,569 | INFO     | ***************************************
[2025-11-26 12:09:25] 2025-11-26 11:08:54,569 | INFO     | 
[2025-11-26 12:09:25] 2025-11-26 11:08:54,569 | INFO     | architecture information:
[2025-11-26 12:09:25] 2025-11-26 11:08:54,570 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:09:25] 2025-11-26 11:08:54,578 | INFO     | cat /etc/os-release:
[2025-11-26 12:09:25] NAME="CentOS Linux"
[2025-11-26 12:09:25] VERSION="7 (Core)"
[2025-11-26 12:09:25] ID="centos"
[2025-11-26 12:09:25] ID_LIKE="rhel fedora"
[2025-11-26 12:09:25] VERSION_ID="7"
[2025-11-26 12:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:09:25] ANSI_COLOR="0;31"
[2025-11-26 12:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:09:25] HOME_URL="https://www.centos.org/"
[2025-11-26 12:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:09:25] 
[2025-11-26 12:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:09:25] 
[2025-11-26 12:09:25] 2025-11-26 11:08:54,579 | INFO     | ***************************************
[2025-11-26 12:09:25] 2025-11-26 11:08:55,081 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 12:09:25] 2025-11-26 11:08:55,093 | INFO     | sufficient remaining disk space (755639517184 B)
[2025-11-26 12:09:25] 2025-11-26 11:08:55,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:09:25] 2025-11-26 11:08:55,093 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:09:25] 2025-11-26 11:08:55,093 | INFO     | update_server=False
[2025-11-26 12:09:25] 2025-11-26 11:08:55,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:09:25] 2025-11-26 11:08:55,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:09:25] 2025-11-26 11:08:55,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:09:25] 2025-11-26 11:08:55,181 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 12:09:25] 2025-11-26 11:08:55,181 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 12:09:25] 2025-11-26 11:08:55,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:09:25] 2025-11-26 11:08:55,182 | INFO     | will abort loop
[2025-11-26 12:09:25] 2025-11-26 11:08:55,554 | INFO     | all payload control threads have been joined
[2025-11-26 12:09:25] 2025-11-26 11:08:56,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:09:25] 2025-11-26 11:08:56,092 | INFO     | all data control threads have been joined
[2025-11-26 12:09:25] 2025-11-26 11:08:56,099 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,099 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,140 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,187 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,497 | INFO     | all job control threads have been joined
[2025-11-26 12:09:25] 2025-11-26 11:08:56,557 | INFO     | [payload] control thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,779 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,817 | INFO     | [job] validate thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:56,877 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,009 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,065 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,097 | INFO     | [data] control thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,502 | INFO     | [job] control thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:57,594 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:58,095 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:08:59,099 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:09:25] 2025-11-26 11:09:13,341 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:09:25] 2025-11-26 11:09:13,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140653719512896)>', '<ExcThread(monitor, started 140653031831296)>']
[2025-11-26 12:09:25] 2025-11-26 11:09:18,793 | INFO     | all workflow threads have been joined
[2025-11-26 12:09:25] 2025-11-26 11:09:18,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:09:25] 2025-11-26 11:09:18,794 | INFO     | traces error code: 0
[2025-11-26 12:09:25] 2025-11-26 11:09:18,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:09:25] 2025-11-26 11:09:25,251 | INFO     | PID=1031185 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:09:25] 2025-11-26 11:09:25,252 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:09:25] 2025-11-26 11:09:25,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:09:25] 2025-11-26 11:09:25,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:09:25] 2025-11-26 11:09:25,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:09:25] 2025-11-26 11:09:25,252 | INFO     | [monitor] control thread has ended
[2025-11-26 12:09:25] 2025-11-26 11:09:25,329 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:09:25] 2025-11-26 11:09:25,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:09:25] 2025-11-26 11:09:25,332 [wrapper] pilotpid: 1031185
[2025-11-26 12:09:25] 2025-11-26 11:09:25,333 [wrapper] Pilot exit status: 0
[2025-11-26 12:09:25] 2025-11-26 11:09:25,338 [wrapper] pandaids: 6895882714
[2025-11-26 12:09:25] 2025-11-26 11:09:25,351 [wrapper] cleanup supervisor_pilot 1067750 1031186
[2025-11-26 12:09:25] 2025-11-26 11:09:25,352 [wrapper] Test setup, not cleaning
[2025-11-26 12:09:25] 2025-11-26 11:09:25,354 [wrapper] apfmon messages muted
[2025-11-26 12:09:25] 2025-11-26 11:09:25,355 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:09:25] 2025-11-26 11:09:25,356 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:09:25]  *** Error codes and diagnostics ***
[2025-11-26 12:09:25]     "exeErrorCode": 0,
[2025-11-26 12:09:25]     "exeErrorDiag": "",
[2025-11-26 12:09:25]     "pilotErrorCode": 0,
[2025-11-26 12:09:25]     "pilotErrorDiag": "",
[2025-11-26 12:09:25]  *** Listing of results directory ***
[2025-11-26 12:09:25] total 1307244
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc    576529 Nov 24 17:06 pilot3.tar.gz
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc      5112 Nov 24 17:37 queuedata.json
[2025-11-26 12:09:25] -rwx------ 1 boinc boinc     36292 Nov 24 17:40 runpilot2-wrapper.sh
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:09:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:16 run_atlas
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:16 job.xml
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:16 start_atlas.sh
[2025-11-26 12:09:25] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:16 shared
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc    590107 Nov 26 08:16 input.tar.gz
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc      6729 Nov 26 08:16 init_data.xml
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc 409917102 Nov 26 08:16 EVNT.47483658._001389.pool.root.1
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:16 boinc_lockfile
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc      2786 Nov 26 08:16 pandaJob.out
[2025-11-26 12:09:25] -rw------- 1 boinc boinc    991877 Nov 26 08:16 agis_schedconf.cvmfs.json
[2025-11-26 12:09:25] drwx------ 5 boinc boinc      4096 Nov 26 08:16 pilot3
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc       533 Nov 26 12:04 boinc_task_state.xml
[2025-11-26 12:09:25] -rw------- 1 boinc boinc 916887320 Nov 26 12:08 HITS.47556149._003760.pool.root.1
[2025-11-26 12:09:25] -rw------- 1 boinc boinc        95 Nov 26 12:08 pilot_heartbeat.json
[2025-11-26 12:09:25] -rw------- 1 boinc boinc      1027 Nov 26 12:08 memory_monitor_summary.json
[2025-11-26 12:09:25] -rw------- 1 boinc boinc   1516240 Nov 26 12:08 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:09:25] -rw------- 1 boinc boinc   1959191 Nov 26 12:08 log.47556149._003760.job.log.tgz.1
[2025-11-26 12:09:25] -rw------- 1 boinc boinc      8599 Nov 26 12:08 heartbeat.json
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc      8192 Nov 26 12:09 boinc_mmap_file
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc        29 Nov 26 12:09 wrapper_checkpoint.txt
[2025-11-26 12:09:25] -rw------- 1 boinc boinc       747 Nov 26 12:09 pilotlog.txt
[2025-11-26 12:09:25] -rw------- 1 boinc boinc   1989643 Nov 26 12:09 log.47556149._003760.job.log.1
[2025-11-26 12:09:25] -rw------- 1 boinc boinc       353 Nov 26 12:09 output.list
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc       620 Nov 26 12:09 runtime_log
[2025-11-26 12:09:25] -rw------- 1 boinc boinc   3973120 Nov 26 12:09 result.tar.gz
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc      9133 Nov 26 12:09 runtime_log.err
[2025-11-26 12:09:25] -rw------- 1 boinc boinc       714 Nov 26 12:09 FmXKDm6moh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOmLKDmTZIFin.diag
[2025-11-26 12:09:25] -rw-r--r-- 1 boinc boinc     21446 Nov 26 12:09 stderr.txt
[2025-11-26 12:09:25] HITS file was successfully produced:
[2025-11-26 12:09:25] -rw------- 1 boinc boinc 916887320 Nov 26 12:08 shared/HITS.pool.root.1
[2025-11-26 12:09:25]  *** Contents of shared directory: ***
[2025-11-26 12:09:25] total 1300192
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:16 start_atlas.sh
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc    590107 Nov 26 08:16 input.tar.gz
[2025-11-26 12:09:25] -rw-r--r-- 2 boinc boinc 409917102 Nov 26 08:16 ATLAS.root_0
[2025-11-26 12:09:25] -rw------- 1 boinc boinc 916887320 Nov 26 12:08 HITS.pool.root.1
[2025-11-26 12:09:25] -rw------- 1 boinc boinc   3973120 Nov 26 12:09 result.tar.gz
12:09:26 (1027336): run_atlas exited; CPU time 160971.418725
12:09:26 (1027336): called boinc_finish(0)

</stderr_txt>
]]>

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