Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:32 (225693): wrapper (7.7.26015): starting
12:21:32 (225693): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:21:32] Arguments: --nthreads 8
[2025-11-25 12:21:32] Threads: 8
[2025-11-25 12:21:32] Checking for CVMFS
[2025-11-25 12:21:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:21:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:21:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:21:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:21:33] 2.13.2.0 8544 33231 164192 153291 2 191 36194289 40960000 21959 16776704 0 69804319 99.788 36821614 38228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:21:33] CVMFS is ok
[2025-11-25 12:21:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:21:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:21:33] Further information can be found at the LHC@home message board.
[2025-11-25 12:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:21:33] Checking for apptainer binary...
[2025-11-25 12:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:21:33] Running /usr/bin/apptainer --version
[2025-11-25 12:21:34] apptainer version 1.4.4-1.el9
[2025-11-25 12:21:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:21:34] c-212-10.aglt2.org
[2025-11-25 12:21:34] apptainer works
[2025-11-25 12:21:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:21:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:21:34] Starting ATLAS job with PandaID=6895883535
[2025-11-25 12:21:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:49:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:49:40] 2025-11-26 17:48:57,947 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:49:40] 2025-11-26 17:48:57,949 | INFO     | sum of square deviations: 929775112725.1985
[2025-11-26 12:49:40] 2025-11-26 17:48:57,998 | INFO     | sum of deviations: 6066223877004.429
[2025-11-26 12:49:40] 2025-11-26 17:48:57,998 | INFO     | mean x: 1764135320.4521499
[2025-11-26 12:49:40] 2025-11-26 17:48:57,998 | INFO     | mean y: 2893786.2524271845
[2025-11-26 12:49:40] 2025-11-26 17:48:57,998 | INFO     | intersect: -11507029050.708508
[2025-11-26 12:49:40] 2025-11-26 17:48:58,000 | INFO     | chi2: 8.891084185738027
[2025-11-26 12:49:40] 2025-11-26 17:48:58,001 | INFO     | sum of square deviations: 920137387983.1503
[2025-11-26 12:49:40] 2025-11-26 17:48:58,043 | INFO     | sum of deviations: 6504808702017.9795
[2025-11-26 12:49:40] 2025-11-26 17:48:58,044 | INFO     | mean x: 1764135167.9554627
[2025-11-26 12:49:40] 2025-11-26 17:48:58,044 | INFO     | mean y: 2900725.9839944327
[2025-11-26 12:49:40] 2025-11-26 17:48:58,044 | INFO     | intersect: -12468456206.055792
[2025-11-26 12:49:40] 2025-11-26 17:48:58,045 | INFO     | chi2: 6.232557220234034
[2025-11-26 12:49:40] 2025-11-26 17:48:58,045 | INFO     | current chi2=6.232557220234034 (change=29.90104367438644 %)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,046 | INFO     | sum of square deviations: 910566501703.5692
[2025-11-26 12:49:40] 2025-11-26 17:48:58,149 | INFO     | sum of deviations: 6834975177977.498
[2025-11-26 12:49:40] 2025-11-26 17:48:58,150 | INFO     | mean x: 1764135015.458799
[2025-11-26 12:49:40] 2025-11-26 17:48:58,150 | INFO     | mean y: 2905981.084497207
[2025-11-26 12:49:40] 2025-11-26 17:48:58,150 | INFO     | intersect: -13239201013.520504
[2025-11-26 12:49:40] 2025-11-26 17:48:58,151 | INFO     | chi2: 4.217466785719209
[2025-11-26 12:49:40] 2025-11-26 17:48:58,151 | INFO     | current chi2=4.217466785719209 (change=32.331679651055936 %)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,152 | INFO     | sum of square deviations: 901061959392.7229
[2025-11-26 12:49:40] 2025-11-26 17:48:58,183 | INFO     | sum of deviations: 6796306517632.614
[2025-11-26 12:49:40] 2025-11-26 17:48:58,183 | INFO     | mean x: 1764134862.960056
[2025-11-26 12:49:40] 2025-11-26 17:48:58,183 | INFO     | mean y: 2905360.2740014014
[2025-11-26 12:49:40] 2025-11-26 17:48:58,183 | INFO     | intersect: -13303173253.008955
[2025-11-26 12:49:40] 2025-11-26 17:48:58,184 | INFO     | chi2: 4.20336023637678
[2025-11-26 12:49:40] 2025-11-26 17:48:58,184 | INFO     | current chi2=4.20336023637678 (change=0.33447920420368604 %)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,184 | INFO     | right removable region: 1426
[2025-11-26 12:49:40] 2025-11-26 17:48:58,185 | INFO     | sum of square deviations: 920136550453.1483
[2025-11-26 12:49:40] 2025-11-26 17:48:58,231 | INFO     | sum of deviations: 5593214311527.204
[2025-11-26 12:49:40] 2025-11-26 17:48:58,231 | INFO     | mean x: 1764135472.9554627
[2025-11-26 12:49:40] 2025-11-26 17:48:58,231 | INFO     | mean y: 2901267.471816284
[2025-11-26 12:49:40] 2025-11-26 17:48:58,231 | INFO     | intersect: -10720711189.774796
[2025-11-26 12:49:40] 2025-11-26 17:48:58,233 | INFO     | chi2: 6.204737345845194
[2025-11-26 12:49:40] 2025-11-26 17:48:58,233 | INFO     | current chi2=6.204737345845194 (change=30.21393998497885 %)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,234 | INFO     | sum of square deviations: 910565001837.4003
[2025-11-26 12:49:40] 2025-11-26 17:48:58,348 | INFO     | sum of deviations: 5359438658199.245
[2025-11-26 12:49:40] 2025-11-26 17:48:58,348 | INFO     | mean x: 1764135625.4574022
[2025-11-26 12:49:40] 2025-11-26 17:48:58,349 | INFO     | mean y: 2904988.962988827
[2025-11-26 12:49:40] 2025-11-26 17:48:58,349 | INFO     | intersect: -10380512614.72748
[2025-11-26 12:49:40] 2025-11-26 17:48:58,350 | INFO     | chi2: 5.519904265940243
[2025-11-26 12:49:40] 2025-11-26 17:48:58,350 | INFO     | current chi2=5.519904265940243 (change=11.037261397753253 %)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,350 | INFO     | left removable region: 20
[2025-11-26 12:49:40] 2025-11-26 17:48:58,374 | INFO     | sum of square deviations: 861863071062.2457
[2025-11-26 12:49:40] 2025-11-26 17:48:58,510 | INFO     | sum of deviations: 5844213990958.398
[2025-11-26 12:49:40] 2025-11-26 17:48:58,511 | INFO     | mean x: 1764135442.470128
[2025-11-26 12:49:40] 2025-11-26 17:48:58,511 | INFO     | mean y: 2920557.6287339972
[2025-11-26 12:49:40] 2025-11-26 17:48:58,511 | INFO     | intersect: -11959519162.78121
[2025-11-26 12:49:40] 2025-11-26 17:48:58,512 | INFO     | chi2: 0.7174198927248231
[2025-11-26 12:49:40] 2025-11-26 17:48:58,512 | INFO     | current memory leak: 6.78 B/s (using 1406 data points, chi2=0.72)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,541 | INFO     | could have reported an average CPU frequency of 3041 MHz (52 samples)
[2025-11-26 12:49:40] 2025-11-26 17:48:58,541 | INFO     | ..............................
[2025-11-26 12:49:40] 2025-11-26 17:48:58,541 | INFO     | . Timing measurements:
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . get job = 0 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . initial setup = 3 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . payload setup = 16 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . stage-in = 0 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . payload execution = 87956 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . stage-out = 4 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | . log creation = 1 s
[2025-11-26 12:49:40] 2025-11-26 17:48:58,542 | INFO     | ..............................
[2025-11-26 12:49:40] 2025-11-26 17:48:59,116 | INFO     | 
[2025-11-26 12:49:40] 2025-11-26 17:48:59,117 | INFO     | job summary report
[2025-11-26 12:49:40] 2025-11-26 17:48:59,117 | INFO     | --------------------------------------------------
[2025-11-26 12:49:40] 2025-11-26 17:48:59,117 | INFO     | PanDA job id: 6895883535
[2025-11-26 12:49:40] 2025-11-26 17:48:59,117 | INFO     | task id: 47556149
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | errors: (none)
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | pilot state: finished 
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | transexitcode: 0
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | exeerrorcode: 0
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | exeerrordiag: 
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | exitcode: 0
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | exitmsg: OK
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | cpuconsumptiontime: 211399 s
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | nevents: 1000
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | neventsw: 0
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | pid: 241149
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | pgrp: 241149
[2025-11-26 12:49:40] 2025-11-26 17:48:59,118 | INFO     | corecount: 8
[2025-11-26 12:49:40] 2025-11-26 17:48:59,119 | INFO     | event service: False
[2025-11-26 12:49:40] 2025-11-26 17:48:59,119 | INFO     | sizes: {0: 2284314, 1: 2284314, 11: 2284604, 12: 2284632, 87976: 2352252, 87977: 2352251, 87983: 2361429, 87984: 2361485, 87997: 2361731}
[2025-11-26 12:49:40] 2025-11-26 17:48:59,119 | INFO     | --------------------------------------------------
[2025-11-26 12:49:40] 2025-11-26 17:48:59,119 | INFO     | 
[2025-11-26 12:49:40] 2025-11-26 17:48:59,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 12:49:40] 2025-11-26 17:48:59,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | job 6895883535 has completed (purged errors)
[2025-11-26 12:49:40] 2025-11-26 17:48:59,164 | INFO     | overall cleanup function is called
[2025-11-26 12:49:40] 2025-11-26 17:49:00,182 | INFO     | --- collectZombieJob: --- 10, [241149]
[2025-11-26 12:49:40] 2025-11-26 17:49:00,182 | INFO     | zombie collector waiting for pid 241149
[2025-11-26 12:49:40] 2025-11-26 17:49:00,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:49:40] 2025-11-26 17:49:00,183 | INFO     | collected zombie processes
[2025-11-26 12:49:40] 2025-11-26 17:49:00,183 | INFO     | will attempt to kill all subprocesses of pid=241149
[2025-11-26 12:49:40] 2025-11-26 17:49:01,368 | INFO     | process IDs to be killed: [241149] (in reverse order)
[2025-11-26 12:49:40] 2025-11-26 17:49:01,517 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:49:40] 2025-11-26 17:49:01,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:49:40] 2025-11-26 17:49:01,532 | INFO     | did not find any defunct processes belonging to 241149
[2025-11-26 12:49:40] 2025-11-26 17:49:01,551 | INFO     | did not find any defunct processes belonging to 241149
[2025-11-26 12:49:40] 2025-11-26 17:49:01,553 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:49:40] 2025-11-26 17:49:01,553 | INFO     | ready for new job
[2025-11-26 12:49:40] 2025-11-26 17:49:01,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:49:40] 2025-11-26 17:49:01,580 | INFO     | ***************************************
[2025-11-26 12:49:40] 2025-11-26 17:49:01,580 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:49:40] 2025-11-26 17:49:01,581 | INFO     | ***************************************
[2025-11-26 12:49:40] 2025-11-26 17:49:01,581 | INFO     | 
[2025-11-26 12:49:40] 2025-11-26 17:49:01,586 | INFO     | architecture information:
[2025-11-26 12:49:40] 2025-11-26 17:49:01,587 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:49:40] 2025-11-26 17:49:01,604 | INFO     | cat /etc/os-release:
[2025-11-26 12:49:40] NAME="CentOS Linux"
[2025-11-26 12:49:40] VERSION="7 (Core)"
[2025-11-26 12:49:40] ID="centos"
[2025-11-26 12:49:40] ID_LIKE="rhel fedora"
[2025-11-26 12:49:40] VERSION_ID="7"
[2025-11-26 12:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:49:40] ANSI_COLOR="0;31"
[2025-11-26 12:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:49:40] HOME_URL="https://www.centos.org/"
[2025-11-26 12:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:49:40] 
[2025-11-26 12:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:49:40] 
[2025-11-26 12:49:40] 2025-11-26 17:49:01,605 | INFO     | ***************************************
[2025-11-26 12:49:40] 2025-11-26 17:49:02,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 12:49:40] 2025-11-26 17:49:02,170 | INFO     | sufficient remaining disk space (123197194240 B)
[2025-11-26 12:49:40] 2025-11-26 17:49:02,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:49:40] 2025-11-26 17:49:02,171 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:49:40] 2025-11-26 17:49:02,171 | INFO     | update_server=False
[2025-11-26 12:49:40] 2025-11-26 17:49:02,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:49:40] 2025-11-26 17:49:02,276 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 12:49:40] 2025-11-26 17:49:02,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 12:49:40] 2025-11-26 17:49:02,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:49:40] 2025-11-26 17:49:02,277 | INFO     | will abort loop
[2025-11-26 12:49:40] 2025-11-26 17:49:02,352 | INFO     | all data control threads have been joined
[2025-11-26 12:49:40] 2025-11-26 17:49:02,649 | INFO     | all payload control threads have been joined
[2025-11-26 12:49:40] 2025-11-26 17:49:03,178 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,182 | INFO     | [job] validate thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:49:40] 2025-11-26 17:49:03,282 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,358 | INFO     | [data] control thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,498 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,676 | INFO     | [payload] control thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,704 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:03,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:49:40] 2025-11-26 17:49:03,780 | INFO     | all job control threads have been joined
[2025-11-26 12:49:40] 2025-11-26 17:49:04,109 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:04,551 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:04,574 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:04,666 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:04,738 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:04,786 | INFO     | [job] control thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:05,257 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:05,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:49:40] 2025-11-26 17:49:09,310 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:49:40] 2025-11-26 17:49:32,161 | INFO     | PID=231319 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 12:49:40] 2025-11-26 17:49:32,161 | INFO     | .. there are 17 such processes running
[2025-11-26 12:49:40] 2025-11-26 17:49:32,162 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:49:40] 2025-11-26 17:49:32,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:49:40] 2025-11-26 17:49:32,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:49:40] 2025-11-26 17:49:33,472 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:49:40] 2025-11-26 17:49:34,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468097759040)>', '<ExcThread(monitor, started 140467240957696)>']
[2025-11-26 12:49:40] 2025-11-26 17:49:35,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:49:40] 2025-11-26 17:49:35,180 | INFO     | [monitor] control thread has ended
[2025-11-26 12:49:40] 2025-11-26 17:49:39,678 | INFO     | all workflow threads have been joined
[2025-11-26 12:49:40] 2025-11-26 17:49:39,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:49:40] 2025-11-26 17:49:39,679 | INFO     | traces error code: 0
[2025-11-26 12:49:40] 2025-11-26 17:49:39,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:49:40] 2025-11-26 17:49:39,849 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:49:40] 2025-11-26 17:49:39,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:49:40] 2025-11-26 17:49:39,896 [wrapper] pilotpid: 231319
[2025-11-26 12:49:40] 2025-11-26 17:49:39,931 [wrapper] Pilot exit status: 0
[2025-11-26 12:49:40] 2025-11-26 17:49:39,985 [wrapper] pandaids: 6895883535
[2025-11-26 12:49:40] 2025-11-26 17:49:40,082 [wrapper] cleanup supervisor_pilot 3356457 231320
[2025-11-26 12:49:40] 2025-11-26 17:49:40,090 [wrapper] Test setup, not cleaning
[2025-11-26 12:49:40] 2025-11-26 17:49:40,093 [wrapper] apfmon messages muted
[2025-11-26 12:49:40] 2025-11-26 17:49:40,095 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:49:40] 2025-11-26 17:49:40,097 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:49:40]  *** Error codes and diagnostics ***
[2025-11-26 12:49:40]     "exeErrorCode": 0,
[2025-11-26 12:49:40]     "exeErrorDiag": "",
[2025-11-26 12:49:40]     "pilotErrorCode": 0,
[2025-11-26 12:49:40]     "pilotErrorDiag": "",
[2025-11-26 12:49:40]  *** Listing of results directory ***
[2025-11-26 12:49:40] total 1330240
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:46 queuedata.json
[2025-11-26 12:49:40] -rwx------. 1 boincer umatlas     36292 Nov 24 11:46 runpilot2-wrapper.sh
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:49:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:21 run_atlas
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:21 job.xml
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas 410236686 Nov 25 12:21 EVNT.47483658._001390.pool.root.1
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:21 start_atlas.sh
[2025-11-26 12:49:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:21 shared
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 12:21 input.tar.gz
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:21 boinc_lockfile
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 12:21 pandaJob.out
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas        57 Nov 25 12:21 setup.sh.local
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas    991543 Nov 25 12:21 agis_schedconf.cvmfs.json
[2025-11-26 12:49:40] drwx------. 5 boincer umatlas      4096 Nov 25 12:22 pilot3
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas       533 Nov 26 12:37 boinc_task_state.xml
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 12:46 init_data.xml
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas 919646013 Nov 26 12:48 HITS.47556149._003763.pool.root.1
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas      1071 Nov 26 12:48 memory_monitor_summary.json
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas   2493615 Nov 26 12:48 log.47556149._003763.job.log.tgz.1
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas      8627 Nov 26 12:48 heartbeat.json
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas        95 Nov 26 12:49 pilot_heartbeat.json
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:49 boinc_mmap_file
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:49 wrapper_checkpoint.txt
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas      5010 Nov 26 12:49 pilotlog.txt
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas  11684613 Nov 26 12:49 log.47556149._003763.job.log.1
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas       353 Nov 26 12:49 output.list
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:49 runtime_log
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas  14202880 Nov 26 12:49 result.tar.gz
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas       665 Nov 26 12:49 t1tNDmBtoh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr7IKDmOXekBn.diag
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 12:49 runtime_log.err
[2025-11-26 12:49:40] -rw-r--r--. 1 boincer umatlas     21153 Nov 26 12:49 stderr.txt
[2025-11-26 12:49:40] HITS file was successfully produced:
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas 919646013 Nov 26 12:48 shared/HITS.pool.root.1
[2025-11-26 12:49:40]  *** Contents of shared directory: ***
[2025-11-26 12:49:40] total 1313192
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas 410236686 Nov 25 12:21 ATLAS.root_0
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:21 start_atlas.sh
[2025-11-26 12:49:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 12:21 input.tar.gz
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas 919646013 Nov 26 12:48 HITS.pool.root.1
[2025-11-26 12:49:40] -rw-------. 1 boincer umatlas  14202880 Nov 26 12:49 result.tar.gz
12:49:41 (225693): run_atlas exited; CPU time 212370.691062
12:49:41 (225693): called boinc_finish(0)

</stderr_txt>
]]>

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