Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:11 (9507): wrapper (7.7.26015): starting
09:58:11 (9507): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 09:58:11] Arguments: --nthreads 8
[2025-11-25 09:58:11] Threads: 8
[2025-11-25 09:58:11] Checking for CVMFS
[2025-11-25 09:58:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:58:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:58:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:58:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:58:12] 2.11.2.0 6491 7657 74224 153285 2 81 11550834 18432000 1885 130560 0 6795887 99.992 271424 16431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 09:58:12] CVMFS is ok
[2025-11-25 09:58:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:58:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:58:12] Further information can be found at the LHC@home message board.
[2025-11-25 09:58:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:58:12] Checking for apptainer binary...
[2025-11-25 09:58:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:58:12] Running /usr/bin/apptainer --version
[2025-11-25 09:58:12] apptainer version 1.3.2-1.el7
[2025-11-25 09:58:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:58:13] c-206-29.aglt2.org
[2025-11-25 09:58:13] apptainer works
[2025-11-25 09:58:13] Set ATHENA_PROC_NUMBER=8
[2025-11-25 09:58:13] Set ATHENA_CORE_NUMBER=8
[2025-11-25 09:58:13] Starting ATLAS job with PandaID=6895881939
[2025-11-25 09:58:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:28:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:28:25] 2025-11-26 10:27:21,347 | INFO     | mean x: 1764117776.133913
[2025-11-26 05:28:25] 2025-11-26 10:27:21,347 | INFO     | mean y: 2856988.1660869564
[2025-11-26 05:28:25] 2025-11-26 10:27:21,347 | INFO     | intersect: -8265045155.528476
[2025-11-26 05:28:25] 2025-11-26 10:27:21,349 | INFO     | chi2: 6.149854762027899
[2025-11-26 05:28:25] 2025-11-26 10:27:21,351 | INFO     | sum of square deviations: 465473780946.8594
[2025-11-26 05:28:25] 2025-11-26 10:27:21,397 | INFO     | sum of deviations: 2564482534362.6226
[2025-11-26 05:28:25] 2025-11-26 10:27:21,397 | INFO     | mean x: 1764117623.6366813
[2025-11-26 05:28:25] 2025-11-26 10:27:21,398 | INFO     | mean y: 2865804.7851528386
[2025-11-26 05:28:25] 2025-11-26 10:27:21,398 | INFO     | intersect: -9716368703.278471
[2025-11-26 05:28:25] 2025-11-26 10:27:21,399 | INFO     | chi2: 3.3382070768406367
[2025-11-26 05:28:25] 2025-11-26 10:27:21,400 | INFO     | current chi2=3.3382070768406367 (change=45.71892823465848 %)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,401 | INFO     | sum of square deviations: 459402689454.82355
[2025-11-26 05:28:25] 2025-11-26 10:27:21,447 | INFO     | sum of deviations: 2748708307448.5444
[2025-11-26 05:28:25] 2025-11-26 10:27:21,448 | INFO     | mean x: 1764117471.1394737
[2025-11-26 05:28:25] 2025-11-26 10:27:21,448 | INFO     | mean y: 2870431.14122807
[2025-11-26 05:28:25] 2025-11-26 10:27:21,448 | INFO     | intersect: -10552236144.291721
[2025-11-26 05:28:25] 2025-11-26 10:27:21,450 | INFO     | chi2: 2.4850711269949866
[2025-11-26 05:28:25] 2025-11-26 10:27:21,450 | INFO     | current chi2=2.4850711269949866 (change=25.55671143843717 %)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,452 | INFO     | sum of square deviations: 453384552795.05396
[2025-11-26 05:28:25] 2025-11-26 10:27:21,497 | INFO     | sum of deviations: 2756520232289.677
[2025-11-26 05:28:25] 2025-11-26 10:27:21,498 | INFO     | mean x: 1764117318.6414096
[2025-11-26 05:28:25] 2025-11-26 10:27:21,498 | INFO     | mean y: 2870627.4537444934
[2025-11-26 05:28:25] 2025-11-26 10:27:21,498 | INFO     | intersect: -10722737580.829945
[2025-11-26 05:28:25] 2025-11-26 10:27:21,500 | INFO     | chi2: 2.438830072616149
[2025-11-26 05:28:25] 2025-11-26 10:27:21,500 | INFO     | current chi2=2.438830072616149 (change=1.8607537577708504 %)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,500 | INFO     | right removable region: 1134
[2025-11-26 05:28:25] 2025-11-26 10:27:21,502 | INFO     | sum of square deviations: 465473336256.85913
[2025-11-26 05:28:25] 2025-11-26 10:27:21,546 | INFO     | sum of deviations: 1914931084538.1719
[2025-11-26 05:28:25] 2025-11-26 10:27:21,547 | INFO     | mean x: 1764117928.6366813
[2025-11-26 05:28:25] 2025-11-26 10:27:21,547 | INFO     | mean y: 2864332.7816593884
[2025-11-26 05:28:25] 2025-11-26 10:27:21,547 | INFO     | intersect: -7254617450.177704
[2025-11-26 05:28:25] 2025-11-26 10:27:21,549 | INFO     | chi2: 4.134796541139117
[2025-11-26 05:28:25] 2025-11-26 10:27:21,549 | INFO     | current chi2=4.134796541139117 (change=32.76594812174591 %)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,550 | INFO     | sum of square deviations: 459402079333.92535
[2025-11-26 05:28:25] 2025-11-26 10:27:21,576 | INFO     | sum of deviations: 1818372198997.5027
[2025-11-26 05:28:25] 2025-11-26 10:27:21,576 | INFO     | mean x: 1764118081.1359649
[2025-11-26 05:28:25] 2025-11-26 10:27:21,576 | INFO     | mean y: 2866758.409649123
[2025-11-26 05:28:25] 2025-11-26 10:27:21,576 | INFO     | intersect: -6979738281.466085
[2025-11-26 05:28:25] 2025-11-26 10:27:21,577 | INFO     | chi2: 4.0280536169778065
[2025-11-26 05:28:25] 2025-11-26 10:27:21,577 | INFO     | current chi2=4.0280536169778065 (change=2.581576217820467 %)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,577 | INFO     | left removable region: 20
[2025-11-26 05:28:25] 2025-11-26 10:27:21,579 | INFO     | sum of square deviations: 428681426557.01953
[2025-11-26 05:28:25] 2025-11-26 10:27:21,599 | INFO     | monitor loop #5003: job 0:6895881939 is in state 'finished'
[2025-11-26 05:28:25] 2025-11-26 10:27:21,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,623 | INFO     | sum of deviations: 2208848961587.61
[2025-11-26 05:28:25] 2025-11-26 10:27:21,623 | INFO     | mean x: 1764117898.1436267
[2025-11-26 05:28:25] 2025-11-26 10:27:21,623 | INFO     | mean y: 2884519.458707361
[2025-11-26 05:28:25] 2025-11-26 10:27:21,623 | INFO     | intersect: -9087012420.39475
[2025-11-26 05:28:25] 2025-11-26 10:27:21,625 | INFO     | chi2: 0.2089972336168807
[2025-11-26 05:28:25] 2025-11-26 10:27:21,625 | INFO     | current memory leak: 5.15 B/s (using 1114 data points, chi2=0.21)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,626 | INFO     | could have reported an average CPU frequency of 2633 MHz (42 samples)
[2025-11-26 05:28:25] 2025-11-26 10:27:21,627 | INFO     | ..............................
[2025-11-26 05:28:25] 2025-11-26 10:27:21,627 | INFO     | . Timing measurements:
[2025-11-26 05:28:25] 2025-11-26 10:27:21,627 | INFO     | . get job = 0 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,627 | INFO     | . initial setup = 2 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,627 | INFO     | . payload setup = 5 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,628 | INFO     | . stage-in = 0 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,628 | INFO     | . payload execution = 70103 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,628 | INFO     | . stage-out = 4 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,628 | INFO     | . log creation = 0 s
[2025-11-26 05:28:25] 2025-11-26 10:27:21,628 | INFO     | ..............................
[2025-11-26 05:28:25] 2025-11-26 10:27:22,043 | INFO     | 
[2025-11-26 05:28:25] 2025-11-26 10:27:22,043 | INFO     | job summary report
[2025-11-26 05:28:25] 2025-11-26 10:27:22,043 | INFO     | --------------------------------------------------
[2025-11-26 05:28:25] 2025-11-26 10:27:22,043 | INFO     | PanDA job id: 6895881939
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | task id: 47556149
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | errors: (none)
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | pilot state: finished 
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | transexitcode: 0
[2025-11-26 05:28:25] 2025-11-26 10:27:22,044 | INFO     | exeerrorcode: 0
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | exeerrordiag: 
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | exitcode: 0
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | exitmsg: OK
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | cpuconsumptiontime: 540791 s
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | nevents: 1000
[2025-11-26 05:28:25] 2025-11-26 10:27:22,045 | INFO     | neventsw: 0
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | pid: 19634
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | pgrp: 19634
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | corecount: 8
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | event service: False
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | sizes: {0: 2284143, 1: 2284342, 4: 2284604, 12: 2284632, 70113: 2341178, 70118: 2350356, 70122: 2350546}
[2025-11-26 05:28:25] 2025-11-26 10:27:22,046 | INFO     | --------------------------------------------------
[2025-11-26 05:28:25] 2025-11-26 10:27:22,047 | INFO     | 
[2025-11-26 05:28:25] 2025-11-26 10:27:22,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 05:28:25] 2025-11-26 10:27:22,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:28:25] 2025-11-26 10:27:22,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:28:25] 2025-11-26 10:27:22,070 | INFO     | job 6895881939 has completed (purged errors)
[2025-11-26 05:28:25] 2025-11-26 10:27:22,070 | INFO     | overall cleanup function is called
[2025-11-26 05:28:25] 2025-11-26 10:27:23,086 | INFO     | --- collectZombieJob: --- 10, [19634]
[2025-11-26 05:28:25] 2025-11-26 10:27:23,086 | INFO     | zombie collector waiting for pid 19634
[2025-11-26 05:28:25] 2025-11-26 10:27:23,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:28:25] 2025-11-26 10:27:23,086 | INFO     | collected zombie processes
[2025-11-26 05:28:25] 2025-11-26 10:27:23,086 | INFO     | will attempt to kill all subprocesses of pid=19634
[2025-11-26 05:28:25] 2025-11-26 10:27:23,263 | INFO     | process IDs to be killed: [19634] (in reverse order)
[2025-11-26 05:28:25] 2025-11-26 10:27:23,309 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:28:25] 2025-11-26 10:27:23,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:28:25] 2025-11-26 10:27:23,321 | INFO     | did not find any defunct processes belonging to 19634
[2025-11-26 05:28:25] 2025-11-26 10:27:23,326 | INFO     | did not find any defunct processes belonging to 19634
[2025-11-26 05:28:25] 2025-11-26 10:27:23,328 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:28:25] 2025-11-26 10:27:23,328 | INFO     | ready for new job
[2025-11-26 05:28:25] 2025-11-26 10:27:23,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:28:25] 2025-11-26 10:27:23,333 | INFO     | ***************************************
[2025-11-26 05:28:25] 2025-11-26 10:27:23,334 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:28:25] 2025-11-26 10:27:23,334 | INFO     | ***************************************
[2025-11-26 05:28:25] 2025-11-26 10:27:23,334 | INFO     | 
[2025-11-26 05:28:25] 2025-11-26 10:27:23,335 | INFO     | architecture information:
[2025-11-26 05:28:25] 2025-11-26 10:27:23,336 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:28:25] 2025-11-26 10:27:23,349 | INFO     | cat /etc/os-release:
[2025-11-26 05:28:25] NAME="CentOS Linux"
[2025-11-26 05:28:25] VERSION="7 (Core)"
[2025-11-26 05:28:25] ID="centos"
[2025-11-26 05:28:25] ID_LIKE="rhel fedora"
[2025-11-26 05:28:25] VERSION_ID="7"
[2025-11-26 05:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:28:25] ANSI_COLOR="0;31"
[2025-11-26 05:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:28:25] HOME_URL="https://www.centos.org/"
[2025-11-26 05:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:28:25] 
[2025-11-26 05:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:28:25] 
[2025-11-26 05:28:25] 2025-11-26 10:27:23,349 | INFO     | ***************************************
[2025-11-26 05:28:25] 2025-11-26 10:27:23,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 05:28:25] 2025-11-26 10:27:23,868 | INFO     | sufficient remaining disk space (25027411968 B)
[2025-11-26 05:28:25] 2025-11-26 10:27:23,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:28:25] 2025-11-26 10:27:23,868 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:28:25] 2025-11-26 10:27:23,868 | INFO     | update_server=False
[2025-11-26 05:28:25] 2025-11-26 10:27:23,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:28:25] 2025-11-26 10:27:23,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:28:25] 2025-11-26 10:27:23,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:28:25] 2025-11-26 10:27:24,102 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 05:28:25] 2025-11-26 10:27:24,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 05:28:25] 2025-11-26 10:27:24,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:28:25] 2025-11-26 10:27:24,110 | INFO     | will abort loop
[2025-11-26 05:28:25] 2025-11-26 10:27:24,541 | INFO     | all data control threads have been joined
[2025-11-26 05:28:25] 2025-11-26 10:27:24,874 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,040 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,082 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,109 | INFO     | all job control threads have been joined
[2025-11-26 05:28:25] 2025-11-26 10:27:25,115 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,201 | INFO     | all payload control threads have been joined
[2025-11-26 05:28:25] 2025-11-26 10:27:25,310 | INFO     | [job] validate thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,383 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,547 | INFO     | [data] control thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,632 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:25,875 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:26,115 | INFO     | [job] control thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:26,208 | INFO     | [payload] control thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:26,248 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:26,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:28:25] 2025-11-26 10:27:27,801 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:27,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:34,157 | INFO     | job.realtimelogging is not enabled
[2025-11-26 05:28:25] 2025-11-26 10:27:35,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:28:25] 2025-11-26 10:27:53,559 | INFO     | PID=13197 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 05:28:25] 2025-11-26 10:27:53,559 | INFO     | .. there are 3 such processes running
[2025-11-26 05:28:25] 2025-11-26 10:27:53,560 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:28:25] 2025-11-26 10:27:53,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:28:25] 2025-11-26 10:27:53,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:28:25] 2025-11-26 10:28:20,552 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:28:25] 2025-11-26 10:28:20,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834059167552)>', '<ExcThread(monitor, started 139833330628352)>']
[2025-11-26 05:28:25] 2025-11-26 10:28:20,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:28:25] 2025-11-26 10:28:20,698 | INFO     | [monitor] control thread has ended
[2025-11-26 05:28:25] 2025-11-26 10:28:25,702 | INFO     | all workflow threads have been joined
[2025-11-26 05:28:25] 2025-11-26 10:28:25,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:28:25] 2025-11-26 10:28:25,703 | INFO     | traces error code: 0
[2025-11-26 05:28:25] 2025-11-26 10:28:25,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:28:25] 2025-11-26 10:28:25,821 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:28:25] 2025-11-26 10:28:25,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:28:25] 2025-11-26 10:28:25,826 [wrapper] pilotpid: 13197
[2025-11-26 05:28:25] 2025-11-26 10:28:25,828 [wrapper] Pilot exit status: 0
[2025-11-26 05:28:25] 2025-11-26 10:28:25,837 [wrapper] pandaids: 6895881939
[2025-11-26 05:28:25] 2025-11-26 10:28:25,867 [wrapper] cleanup supervisor_pilot 32193 13198
[2025-11-26 05:28:25] 2025-11-26 10:28:25,870 [wrapper] Test setup, not cleaning
[2025-11-26 05:28:25] 2025-11-26 10:28:25,872 [wrapper] apfmon messages muted
[2025-11-26 05:28:25] 2025-11-26 10:28:25,874 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:28:25] 2025-11-26 10:28:25,877 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:28:25]  *** Error codes and diagnostics ***
[2025-11-26 05:28:25]     "exeErrorCode": 0,
[2025-11-26 05:28:25]     "exeErrorDiag": "",
[2025-11-26 05:28:25]     "pilotErrorCode": 0,
[2025-11-26 05:28:25]     "pilotErrorDiag": "",
[2025-11-26 05:28:25]  *** Listing of results directory ***
[2025-11-26 05:28:26] total 1313188
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 11:11 queuedata.json
[2025-11-26 05:28:26] -rwx------ 1 boincer umatlas     36292 Nov 24 11:13 runpilot2-wrapper.sh
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas       100 Nov 25 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:28:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 09:58 run_atlas
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas       105 Nov 25 09:58 job.xml
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas 411201574 Nov 25 09:58 EVNT.47483658._001379.pool.root.1
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 09:58 start_atlas.sh
[2025-11-26 05:28:26] drwxrwx--x 2 boincer umatlas      4096 Nov 25 09:58 shared
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas    590109 Nov 25 09:58 input.tar.gz
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas         0 Nov 25 09:58 boinc_lockfile
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 09:58 pandaJob.out
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas        57 Nov 25 09:58 setup.sh.local
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas    991909 Nov 25 09:58 agis_schedconf.cvmfs.json
[2025-11-26 05:28:26] drwx------ 5 boincer umatlas      4096 Nov 25 09:58 pilot3
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas       533 Nov 26 05:14 boinc_task_state.xml
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 05:18 init_data.xml
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas 905489959 Nov 26 05:26 HITS.47556149._003655.pool.root.1
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas      1080 Nov 26 05:27 memory_monitor_summary.json
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas   1516240 Nov 26 05:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas   2318287 Nov 26 05:27 log.47556149._003655.job.log.tgz.1
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas      8663 Nov 26 05:27 heartbeat.json
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas        95 Nov 26 05:27 pilot_heartbeat.json
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas        29 Nov 26 05:28 wrapper_checkpoint.txt
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 05:28 boinc_mmap_file
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas      5079 Nov 26 05:28 pilotlog.txt
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas   9730019 Nov 26 05:28 log.47556149._003655.job.log.1
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas       353 Nov 26 05:28 output.list
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas       620 Nov 26 05:28 runtime_log
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas  12062720 Nov 26 05:28 result.tar.gz
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas       668 Nov 26 05:28 T8rLDmgMoh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA7IKDmf6tsNn.diag
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 05:28 runtime_log.err
[2025-11-26 05:28:26] -rw-r--r-- 1 boincer umatlas     21170 Nov 26 05:28 stderr.txt
[2025-11-26 05:28:26] HITS file was successfully produced:
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas 905489959 Nov 26 05:26 shared/HITS.pool.root.1
[2025-11-26 05:28:26]  *** Contents of shared directory: ***
[2025-11-26 05:28:26] total 1298220
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas 411201574 Nov 25 09:58 ATLAS.root_0
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 09:58 start_atlas.sh
[2025-11-26 05:28:26] -rw-r--r-- 2 boincer umatlas    590109 Nov 25 09:58 input.tar.gz
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas 905489959 Nov 26 05:26 HITS.pool.root.1
[2025-11-26 05:28:26] -rw------- 1 boincer umatlas  12062720 Nov 26 05:28 result.tar.gz
05:28:27 (9507): run_atlas exited; CPU time 539638.251874
05:28:27 (9507): called boinc_finish(0)

</stderr_txt>
]]>

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