Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:59:14 (3622809): wrapper (7.7.26015): starting
09:59:14 (3622809): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 09:59:14] Arguments: --nthreads 8
[2025-11-25 09:59:14] Threads: 8
[2025-11-25 09:59:14] Checking for CVMFS
[2025-11-25 09:59:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:59:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:59:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:59:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:59:17] 2.13.3.0 9371 28626 141112 153285 2 286 17048508 32935936 28096 16776704 0 154661776 99.773 89026446 34413 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 09:59:17] CVMFS is ok
[2025-11-25 09:59:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:59:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:59:17] Further information can be found at the LHC@home message board.
[2025-11-25 09:59:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:59:17] Checking for apptainer binary...
[2025-11-25 09:59:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:59:17] Running /usr/bin/apptainer --version
[2025-11-25 09:59:17] apptainer version 1.4.4-1.el9
[2025-11-25 09:59:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:59:18] c-8-1.aglt2.org
[2025-11-25 09:59:18] apptainer works
[2025-11-25 09:59:18] Set ATHENA_PROC_NUMBER=8
[2025-11-25 09:59:18] Set ATHENA_CORE_NUMBER=8
[2025-11-25 09:59:18] Starting ATLAS job with PandaID=6894238237
[2025-11-25 09:59:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:10:29]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:10:29] 2025-11-26 03:09:23,923 | INFO     | monitor loop #2693: job 0:6894238237 is in state 'finished'
[2025-11-25 22:10:29] 2025-11-26 03:09:23,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:10:29] 2025-11-26 03:09:24,344 | INFO     | time since job start (43758s) is within the limit (172800.0s)
[2025-11-25 22:10:29] 2025-11-26 03:09:26,351 | INFO     | time since job start (43760s) is within the limit (172800.0s)
[2025-11-25 22:10:29] 2025-11-26 03:09:26,431 | INFO     | monitor loop #2694: job 0:6894238237 is in state 'finished'
[2025-11-25 22:10:29] 2025-11-26 03:09:26,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,176 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:10:29] 2025-11-26 03:09:28,192 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8055250000007
[2025-11-25 22:10:29] 2025-11-26 03:09:28,199 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894238237/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,200 | INFO     | extracted standard info from prmon json
[2025-11-25 22:10:29] 2025-11-26 03:09:28,200 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:10:29] 2025-11-26 03:09:28,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:10:29] 2025-11-26 03:09:28,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 22:10:29] 2025-11-26 03:09:28,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 22:10:29] 2025-11-26 03:09:28,216 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:10:29] 2025-11-26 03:09:28,218 | INFO     | sum of square deviations: 113819352346.965
[2025-11-25 22:10:29] 2025-11-26 03:09:28,230 | INFO     | sum of deviations: 274315640060.08597
[2025-11-25 22:10:29] 2025-11-26 03:09:28,231 | INFO     | mean x: 1764104728.5069833
[2025-11-25 22:10:29] 2025-11-26 03:09:28,231 | INFO     | mean y: 2589430.682960894
[2025-11-25 22:10:29] 2025-11-26 03:09:28,231 | INFO     | intersect: -4249073469.8248463
[2025-11-25 22:10:29] 2025-11-26 03:09:28,232 | INFO     | chi2: 3.4298946307321634
[2025-11-25 22:10:29] 2025-11-26 03:09:28,233 | INFO     | sum of square deviations: 111451476916.96376
[2025-11-25 22:10:29] 2025-11-26 03:09:28,245 | INFO     | sum of deviations: 319022110492.4274
[2025-11-25 22:10:29] 2025-11-26 03:09:28,246 | INFO     | mean x: 1764104576.0070324
[2025-11-25 22:10:29] 2025-11-26 03:09:28,246 | INFO     | mean y: 2592292.7144866385
[2025-11-25 22:10:29] 2025-11-26 03:09:28,246 | INFO     | intersect: -5047034509.327933
[2025-11-25 22:10:29] 2025-11-26 03:09:28,247 | INFO     | chi2: 2.750229700697758
[2025-11-25 22:10:29] 2025-11-26 03:09:28,247 | INFO     | current chi2=2.750229700697758 (change=19.81591282555874 %)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,247 | INFO     | right removable region: 710
[2025-11-25 22:10:29] 2025-11-26 03:09:28,248 | INFO     | sum of square deviations: 111451473866.96376
[2025-11-25 22:10:29] 2025-11-26 03:09:28,261 | INFO     | sum of deviations: 96975305867.3349
[2025-11-25 22:10:29] 2025-11-26 03:09:28,261 | INFO     | mean x: 1764104881.0070324
[2025-11-25 22:10:29] 2025-11-26 03:09:28,261 | INFO     | mean y: 2600835.5330520393
[2025-11-25 22:10:29] 2025-11-26 03:09:28,261 | INFO     | intersect: -1532368640.258017
[2025-11-25 22:10:29] 2025-11-26 03:09:28,262 | INFO     | chi2: 1.1723107663029821
[2025-11-25 22:10:29] 2025-11-26 03:09:28,263 | INFO     | current chi2=1.1723107663029821 (change=65.82079356610629 %)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,263 | INFO     | sum of square deviations: 109116665774.46452
[2025-11-25 22:10:29] 2025-11-26 03:09:28,276 | INFO     | sum of deviations: 42388937683.96888
[2025-11-25 22:10:29] 2025-11-26 03:09:28,276 | INFO     | mean x: 1764105033.5070822
[2025-11-25 22:10:29] 2025-11-26 03:09:28,276 | INFO     | mean y: 2604395.606232295
[2025-11-25 22:10:29] 2025-11-26 03:09:28,277 | INFO     | intersect: -682703735.8561864
[2025-11-25 22:10:29] 2025-11-26 03:09:28,278 | INFO     | chi2: 0.9642151061329061
[2025-11-25 22:10:29] 2025-11-26 03:09:28,278 | INFO     | current chi2=0.9642151061329061 (change=17.750895594546986 %)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,278 | INFO     | left removable region: 20
[2025-11-25 22:10:29] 2025-11-26 03:09:28,279 | INFO     | sum of square deviations: 101864807654.46373
[2025-11-25 22:10:29] 2025-11-26 03:09:28,302 | INFO     | sum of deviations: 368739556.44927156
[2025-11-25 22:10:29] 2025-11-26 03:09:28,303 | INFO     | mean x: 1764105155.5072465
[2025-11-25 22:10:29] 2025-11-26 03:09:28,303 | INFO     | mean y: 2613307.8101449274
[2025-11-25 22:10:29] 2025-11-26 03:09:28,303 | INFO     | intersect: -3772561.535214903
[2025-11-25 22:10:29] 2025-11-26 03:09:28,304 | INFO     | chi2: 0.02911243463307107
[2025-11-25 22:10:29] 2025-11-26 03:09:28,304 | INFO     | current memory leak: 0.00 B/s (using 690 data points, chi2=0.03)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,309 | INFO     | could have reported an average CPU frequency of 2599 MHz (27 samples)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,309 | INFO     | ..............................
[2025-11-25 22:10:29] 2025-11-26 03:09:28,309 | INFO     | . Timing measurements:
[2025-11-25 22:10:29] 2025-11-26 03:09:28,309 | INFO     | . get job = 0 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . initial setup = 3 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . payload setup = 32 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . stage-in = 0 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . payload execution = 43653 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . stage-out = 4 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | . log creation = 0 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,310 | INFO     | ..............................
[2025-11-25 22:10:29] 2025-11-26 03:09:28,372 | INFO     | time since job start (43762s) is within the limit (172800.0s)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,524 | INFO     | 
[2025-11-25 22:10:29] 2025-11-26 03:09:28,524 | INFO     | job summary report
[2025-11-25 22:10:29] 2025-11-26 03:09:28,524 | INFO     | --------------------------------------------------
[2025-11-25 22:10:29] 2025-11-26 03:09:28,524 | INFO     | PanDA job id: 6894238237
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | task id: 47523675
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | errors: (none)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | pilot state: finished 
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | transexitcode: 0
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | exeerrorcode: 0
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | exeerrordiag: 
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | exitcode: 0
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | exitmsg: OK
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | cpuconsumptiontime: 159930 s
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | nevents: 400
[2025-11-25 22:10:29] 2025-11-26 03:09:28,525 | INFO     | neventsw: 0
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | pid: 3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | pgrp: 3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | corecount: 8
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | event service: False
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | sizes: {0: 2283727, 1: 2283926, 12: 2283926, 23: 2284244, 34: 2284244, 43688: 2328866, 43693: 2337864, 43695: 2337920, 43703: 2338114}
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | --------------------------------------------------
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | 
[2025-11-25 22:10:29] 2025-11-26 03:09:28,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 22:10:29] 2025-11-26 03:09:28,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:10:29] 2025-11-26 03:09:28,556 | INFO     | job 6894238237 has completed (purged errors)
[2025-11-25 22:10:29] 2025-11-26 03:09:28,557 | INFO     | overall cleanup function is called
[2025-11-25 22:10:29] 2025-11-26 03:09:29,601 | INFO     | --- collectZombieJob: --- 10, [3638742]
[2025-11-25 22:10:29] 2025-11-26 03:09:29,601 | INFO     | zombie collector waiting for pid 3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:29,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:10:29] 2025-11-26 03:09:29,602 | INFO     | collected zombie processes
[2025-11-25 22:10:29] 2025-11-26 03:09:29,602 | INFO     | will attempt to kill all subprocesses of pid=3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:31,006 | INFO     | PID=3627637 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 22:10:29] 2025-11-26 03:09:31,007 | INFO     | .. there are 42 such processes running
[2025-11-25 22:10:29] 2025-11-26 03:09:31,069 | INFO     | process IDs to be killed: [3638742] (in reverse order)
[2025-11-25 22:10:29] 2025-11-26 03:09:31,240 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:10:29] 2025-11-26 03:09:31,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:10:29] 2025-11-26 03:09:31,270 | INFO     | did not find any defunct processes belonging to 3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:31,289 | INFO     | did not find any defunct processes belonging to 3638742
[2025-11-25 22:10:29] 2025-11-26 03:09:31,290 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:10:29] 2025-11-26 03:09:31,291 | INFO     | ready for new job
[2025-11-25 22:10:29] 2025-11-26 03:09:31,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:10:29] 2025-11-26 03:09:31,297 | INFO     | ***************************************
[2025-11-25 22:10:29] 2025-11-26 03:09:31,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:10:29] 2025-11-26 03:09:31,297 | INFO     | ***************************************
[2025-11-25 22:10:29] 2025-11-26 03:09:31,297 | INFO     | 
[2025-11-25 22:10:29] 2025-11-26 03:09:31,299 | INFO     | architecture information:
[2025-11-25 22:10:29] 2025-11-26 03:09:31,300 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:10:29] 2025-11-26 03:09:31,321 | INFO     | cat /etc/os-release:
[2025-11-25 22:10:29] NAME="CentOS Linux"
[2025-11-25 22:10:29] VERSION="7 (Core)"
[2025-11-25 22:10:29] ID="centos"
[2025-11-25 22:10:29] ID_LIKE="rhel fedora"
[2025-11-25 22:10:29] VERSION_ID="7"
[2025-11-25 22:10:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:10:29] ANSI_COLOR="0;31"
[2025-11-25 22:10:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:10:29] HOME_URL="https://www.centos.org/"
[2025-11-25 22:10:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:10:29] 
[2025-11-25 22:10:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:10:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:10:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:10:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:10:29] 
[2025-11-25 22:10:29] 2025-11-26 03:09:31,322 | INFO     | ***************************************
[2025-11-25 22:10:29] 2025-11-26 03:09:31,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 22:10:29] 2025-11-26 03:09:31,906 | INFO     | sufficient remaining disk space (73481060352 B)
[2025-11-25 22:10:29] 2025-11-26 03:09:31,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:10:29] 2025-11-26 03:09:31,907 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:10:29] 2025-11-26 03:09:31,907 | INFO     | update_server=False
[2025-11-25 22:10:29] 2025-11-26 03:09:31,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:10:29] 2025-11-26 03:09:31,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:10:29] 2025-11-26 03:09:31,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:10:29] 2025-11-26 03:09:31,908 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 22:10:29] 2025-11-26 03:09:31,909 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:10:29] 2025-11-26 03:09:31,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:10:29] 2025-11-26 03:09:31,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:10:29] 2025-11-26 03:09:32,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:10:29] 2025-11-26 03:09:32,464 | INFO     | aborting loop
[2025-11-25 22:10:29] 2025-11-26 03:09:32,577 | INFO     | all data control threads have been joined
[2025-11-25 22:10:29] 2025-11-26 03:09:32,642 | INFO     | all job control threads have been joined
[2025-11-25 22:10:29] 2025-11-26 03:09:32,913 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:32,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,086 | INFO     | [job] validate thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,200 | INFO     | all payload control threads have been joined
[2025-11-25 22:10:29] 2025-11-26 03:09:33,310 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,470 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,479 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,583 | INFO     | [data] control thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:10:29] 2025-11-26 03:09:33,711 | INFO     | [job] control thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:33,946 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:34,109 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:34,123 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:34,148 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:34,217 | INFO     | [payload] control thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:34,613 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:09:35,915 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:10:29] 2025-11-26 03:10:23,111 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:10:29] 2025-11-26 03:10:24,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632172984128)>', '<ExcThread(monitor, started 139631601383168)>']
[2025-11-25 22:10:29] 2025-11-26 03:10:25,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:10:29] 2025-11-26 03:10:25,243 | INFO     | [monitor] control thread has ended
[2025-11-25 22:10:29] 2025-11-26 03:10:29,619 | INFO     | all workflow threads have been joined
[2025-11-25 22:10:29] 2025-11-26 03:10:29,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:10:29] 2025-11-26 03:10:29,620 | INFO     | traces error code: 0
[2025-11-25 22:10:29] 2025-11-26 03:10:29,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:10:29] 2025-11-26 03:10:29,768 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:10:29] 2025-11-26 03:10:29,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:10:29] 2025-11-26 03:10:29,774 [wrapper] pilotpid: 3627637
[2025-11-25 22:10:29] 2025-11-26 03:10:29,777 [wrapper] Pilot exit status: 0
[2025-11-25 22:10:29] 2025-11-26 03:10:29,793 [wrapper] pandaids: 6894238237
[2025-11-25 22:10:29] 2025-11-26 03:10:29,883 [wrapper] cleanup supervisor_pilot 1763832 3627638
[2025-11-25 22:10:29] 2025-11-26 03:10:29,886 [wrapper] Test setup, not cleaning
[2025-11-25 22:10:29] 2025-11-26 03:10:29,888 [wrapper] apfmon messages muted
[2025-11-25 22:10:29] 2025-11-26 03:10:29,891 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:10:29] 2025-11-26 03:10:29,893 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:10:29]  *** Error codes and diagnostics ***
[2025-11-25 22:10:29]     "exeErrorCode": 0,
[2025-11-25 22:10:29]     "exeErrorDiag": "",
[2025-11-25 22:10:29]     "pilotErrorCode": 0,
[2025-11-25 22:10:29]     "pilotErrorDiag": "",
[2025-11-25 22:10:29]  *** Listing of results directory ***
[2025-11-25 22:10:29] total 630456
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:46 queuedata.json
[2025-11-25 22:10:29] -rwx------. 1 boincer umatlas     36292 Nov 24 11:48 runpilot2-wrapper.sh
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas       100 Nov 25 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:10:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 09:59 run_atlas
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas       105 Nov 25 09:59 job.xml
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas 287673146 Nov 25 09:59 EVNT.47523673._000001.pool.root.1
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 09:59 start_atlas.sh
[2025-11-25 22:10:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 09:59 shared
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas    589939 Nov 25 09:59 input.tar.gz
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas         0 Nov 25 09:59 boinc_lockfile
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas      2612 Nov 25 09:59 pandaJob.out
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas        57 Nov 25 09:59 setup.sh.local
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas    991909 Nov 25 10:00 agis_schedconf.cvmfs.json
[2025-11-25 22:10:29] drwx------. 5 boincer umatlas      4096 Nov 25 10:00 pilot3
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas 341194360 Nov 25 22:08 HITS.47523675._000017.pool.root.1
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas       532 Nov 25 22:08 boinc_task_state.xml
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas      1045 Nov 25 22:09 memory_monitor_summary.json
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas    852042 Nov 25 22:09 log.47523675._000017.job.log.tgz.1
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 22:09 init_data.xml
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas        95 Nov 25 22:09 pilot_heartbeat.json
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas      7812 Nov 25 22:09 heartbeat.json
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:10 boinc_mmap_file
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:10 wrapper_checkpoint.txt
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas      4552 Nov 25 22:10 pilotlog.txt
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas   5544711 Nov 25 22:10 log.47523675._000017.job.log.1
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas       357 Nov 25 22:10 output.list
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:10 runtime_log
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas   6420480 Nov 25 22:10 result.tar.gz
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 22:10 runtime_log.err
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas       658 Nov 25 22:10 qOGLDmAvoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcmLKDmtPBYem.diag
[2025-11-25 22:10:29] -rw-r--r--. 1 boincer umatlas     21538 Nov 25 22:10 stderr.txt
[2025-11-25 22:10:29] HITS file was successfully produced:
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas 341194360 Nov 25 22:08 shared/HITS.pool.root.1
[2025-11-25 22:10:29]  *** Contents of shared directory: ***
[2025-11-25 22:10:29] total 621008
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas 287673146 Nov 25 09:59 ATLAS.root_0
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 09:59 start_atlas.sh
[2025-11-25 22:10:29] -rw-r--r--. 2 boincer umatlas    589939 Nov 25 09:59 input.tar.gz
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas 341194360 Nov 25 22:08 HITS.pool.root.1
[2025-11-25 22:10:29] -rw-------. 1 boincer umatlas   6420480 Nov 25 22:10 result.tar.gz
22:10:31 (3622809): run_atlas exited; CPU time 162282.674187
22:10:31 (3622809): called boinc_finish(0)

</stderr_txt>
]]>

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