Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:11 (8134): wrapper (7.7.26015): starting
06:25:11 (8134): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 06:25:11] Arguments: --nthreads 12
[2025-11-25 06:25:11] Threads: 12
[2025-11-25 06:25:11] Checking for CVMFS
[2025-11-25 06:25:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:25:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:25:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:25:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:25:11] 2.11.5.0 3883901 26743 206992 153285 0 348 36948978 45568001 12775 130560 0 259894475 99.793 153427492 22682 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 06:25:11] CVMFS is ok
[2025-11-25 06:25:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:25:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:25:11] Further information can be found at the LHC@home message board.
[2025-11-25 06:25:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:25:11] Checking for apptainer binary...
[2025-11-25 06:25:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:25:11] Running /usr/bin/apptainer --version
[2025-11-25 06:25:11] apptainer version 1.4.1-1.el9
[2025-11-25 06:25:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:25:11] wns0028.triumf.lcg
[2025-11-25 06:25:11] apptainer works
[2025-11-25 06:25:11] Set ATHENA_PROC_NUMBER=12
[2025-11-25 06:25:11] Set ATHENA_CORE_NUMBER=12
[2025-11-25 06:25:12] Starting ATLAS job with PandaID=6896451250
[2025-11-25 06:25:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:31:31]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:31:31] 2025-11-25 14:30:22,934 | WARNING  | wrong length of table data, x=[1764080761.0, 1764080822.0, 1764080883.0], y=[1005.0, 588536.0, 708494.0] (must be same and length>=4)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . Timing measurements:
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . get job = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . initial setup = 3 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload setup = 7 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-in = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload execution = 143 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-out = 1 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . log creation = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:31:31] 2025-11-25 14:30:22,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896451250/pilotlog.txt
[2025-11-25 06:31:31] 2025-11-25 14:30:22,950 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 06:31:31] - Log from pilotlog.txt -
[2025-11-25 06:31:31] 2025-11-25 14:30:22,932 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896451250/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | INFO     | extracted standard info from prmon json
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 06:31:31] 2025-11-25 14:30:22,934 | WARNING  | wrong length of table data, x=[1764080761.0, 1764080822.0, 1764080883.0], y=[1005.0, 588536.0, 708494.0] (must be same and length>=4)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . Timing measurements:
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . get job = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . initial setup = 3 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload setup = 7 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-in = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload execution = 143 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-out = 1 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . log creation = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:31:31] 2025-11-25 14:30:22,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896451250/pilotlog.txt
[2025-11-25 06:31:31] 2025-11-25 14:30:22,951 | WARNING  | 
[2025-11-25 06:31:31] [begin log extracts]
[2025-11-25 06:31:31] - Log from pilotlog.txt -
[2025-11-25 06:31:31] 2025-11-25 14:30:22,932 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896451250/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | INFO     | extracted standard info from prmon json
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 06:31:31] 2025-11-25 14:30:22,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 06:31:31] 2025-11-25 14:30:22,934 | WARNING  | wrong length of table data, x=[1764080761.0, 1764080822.0, 1764080883.0], y=[1005.0, 588536.0, 708494.0] (must be same and length>=4)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . Timing measurements:
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . get job = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . initial setup = 3 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload setup = 7 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-in = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . payload execution = 143 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . stage-out = 1 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | . log creation = 0 s
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | ..............................
[2025-11-25 06:31:31] 2025-11-25 14:30:22,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 06:31:31] 2025-11-25 14:30:22,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896451250/pilotlog.txt
[2025-11-25 06:31:31] [end log extracts]
[2025-11-25 06:31:31] 2025-11-25 14:30:22,951 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 06:31:31] 2025-11-25 14:30:22,951 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 06:31:31] 2025-11-25 14:30:22,961 | INFO     | time since job start (298s) is within the limit (172800.0s)
[2025-11-25 06:31:31] 2025-11-25 14:30:23,060 | INFO     | 
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | job summary report
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | --------------------------------------------------
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | PanDA job id: 6896451250
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | task id: 47556149
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 06:28:09,969 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | pilot state: failed 
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | transexitcode: 65
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | exeerrorcode: 65
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | exitcode: 65
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | cpuconsumptiontime: 48 s
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | nevents: 0
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | neventsw: 0
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | pid: 18314
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | pgrp: 18314
[2025-11-25 06:31:31] 2025-11-25 14:30:23,061 | INFO     | corecount: 12
[2025-11-25 06:31:31] 2025-11-25 14:30:23,062 | INFO     | event service: False
[2025-11-25 06:31:31] 2025-11-25 14:30:23,062 | INFO     | sizes: {0: 2284311, 5: 2284573, 11: 2284629, 152: 2310052, 154: 2314342, 155: 2314370, 280: 2314664}
[2025-11-25 06:31:31] 2025-11-25 14:30:23,062 | INFO     | --------------------------------------------------
[2025-11-25 06:31:31] 2025-11-25 14:30:23,062 | INFO     | 
[2025-11-25 06:31:31] 2025-11-25 14:30:23,062 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | job 6896451250 has completed (purged errors)
[2025-11-25 06:31:31] 2025-11-25 14:30:23,082 | INFO     | overall cleanup function is called
[2025-11-25 06:31:31] 2025-11-25 14:30:24,101 | INFO     | --- collectZombieJob: --- 10, [18314]
[2025-11-25 06:31:31] 2025-11-25 14:30:24,101 | INFO     | zombie collector waiting for pid 18314
[2025-11-25 06:31:31] 2025-11-25 14:30:24,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:31:31] 2025-11-25 14:30:24,101 | INFO     | collected zombie processes
[2025-11-25 06:31:31] 2025-11-25 14:30:24,101 | INFO     | will attempt to kill all subprocesses of pid=18314
[2025-11-25 06:31:31] 2025-11-25 14:30:24,435 | INFO     | process IDs to be killed: [18314] (in reverse order)
[2025-11-25 06:31:31] 2025-11-25 14:30:24,493 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:31:31] 2025-11-25 14:30:24,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:31:31] 2025-11-25 14:30:24,500 | INFO     | did not find any defunct processes belonging to 18314
[2025-11-25 06:31:31] 2025-11-25 14:30:24,507 | INFO     | did not find any defunct processes belonging to 18314
[2025-11-25 06:31:31] 2025-11-25 14:30:24,508 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:31:31] 2025-11-25 14:30:24,508 | INFO     | ready for new job
[2025-11-25 06:31:31] 2025-11-25 14:30:24,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:31:31] 2025-11-25 14:30:24,509 | INFO     | ***************************************
[2025-11-25 06:31:31] 2025-11-25 14:30:24,509 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:31:31] 2025-11-25 14:30:24,509 | INFO     | ***************************************
[2025-11-25 06:31:31] 2025-11-25 14:30:24,509 | INFO     | 
[2025-11-25 06:31:31] 2025-11-25 14:30:24,511 | INFO     | architecture information:
[2025-11-25 06:31:31] 2025-11-25 14:30:24,512 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:31:31] 2025-11-25 14:30:24,525 | INFO     | cat /etc/os-release:
[2025-11-25 06:31:31] NAME="CentOS Linux"
[2025-11-25 06:31:31] VERSION="7 (Core)"
[2025-11-25 06:31:31] ID="centos"
[2025-11-25 06:31:31] ID_LIKE="rhel fedora"
[2025-11-25 06:31:31] VERSION_ID="7"
[2025-11-25 06:31:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:31:31] ANSI_COLOR="0;31"
[2025-11-25 06:31:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:31:31] HOME_URL="https://www.centos.org/"
[2025-11-25 06:31:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:31:31] 
[2025-11-25 06:31:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:31:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:31:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:31:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:31:31] 
[2025-11-25 06:31:31] 2025-11-25 14:30:24,526 | INFO     | ***************************************
[2025-11-25 06:31:31] 2025-11-25 14:30:25,029 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 06:31:31] 2025-11-25 14:30:25,065 | INFO     | sufficient remaining disk space (1879549411328 B)
[2025-11-25 06:31:31] 2025-11-25 14:30:25,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:31:31] 2025-11-25 14:30:25,066 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:31:31] 2025-11-25 14:30:25,066 | INFO     | update_server=False
[2025-11-25 06:31:31] 2025-11-25 14:30:25,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:31:31] 2025-11-25 14:30:25,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:31:31] 2025-11-25 14:30:25,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:31:31] 2025-11-25 14:30:25,088 | INFO     | aborting loop
[2025-11-25 06:31:31] 2025-11-25 14:30:25,280 | INFO     | all data control threads have been joined
[2025-11-25 06:31:31] 2025-11-25 14:30:25,500 | INFO     | all job control threads have been joined
[2025-11-25 06:31:31] 2025-11-25 14:30:25,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:31:31] 2025-11-25 14:30:25,964 | INFO     | all payload control threads have been joined
[2025-11-25 06:31:31] 2025-11-25 14:30:26,072 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,087 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,094 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,174 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:31:31] 2025-11-25 14:30:26,285 | INFO     | [data] control thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,506 | INFO     | [job] control thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,581 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,733 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,743 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:26,970 | INFO     | [payload] control thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:27,168 | INFO     | [job] validate thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:27,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:27,362 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:27,464 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:27,841 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:30,263 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:31:31] 2025-11-25 14:30:56,246 | INFO     | PID=11769 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 06:31:31] 2025-11-25 14:30:56,246 | INFO     | .. there are 14 such processes running
[2025-11-25 06:31:31] 2025-11-25 14:30:56,247 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:31:31] 2025-11-25 14:30:56,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:31:31] 2025-11-25 14:30:56,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:31:31] 2025-11-25 14:31:24,952 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:31:31] 2025-11-25 14:31:25,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967656335168)>', '<ExcThread(monitor, started 139967095346944)>']
[2025-11-25 06:31:31] 2025-11-25 14:31:26,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:31:31] 2025-11-25 14:31:26,425 | INFO     | [monitor] control thread has ended
[2025-11-25 06:31:31] 2025-11-25 14:31:30,796 | INFO     | all workflow threads have been joined
[2025-11-25 06:31:31] 2025-11-25 14:31:30,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:31:31] 2025-11-25 14:31:30,796 | INFO     | traces error code: 0
[2025-11-25 06:31:31] 2025-11-25 14:31:30,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:31:31] 2025-11-25 14:31:31,104 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:31:31] 2025-11-25 14:31:31,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:31:31] 2025-11-25 14:31:31,108 [wrapper] pilotpid: 11769
[2025-11-25 06:31:31] 2025-11-25 14:31:31,110 [wrapper] Pilot exit status: 0
[2025-11-25 06:31:31] 2025-11-25 14:31:31,120 [wrapper] pandaids: 6896451250
[2025-11-25 06:31:31] 2025-11-25 14:31:31,159 [wrapper] cleanup supervisor_pilot   11775 11770
[2025-11-25 06:31:31] 2025-11-25 14:31:31,161 [wrapper] Test setup, not cleaning
[2025-11-25 06:31:31] 2025-11-25 14:31:31,163 [wrapper] apfmon messages muted
[2025-11-25 06:31:31] 2025-11-25 14:31:31,166 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:31:31] 2025-11-25 14:31:31,171 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:31:31]  *** Error codes and diagnostics ***
[2025-11-25 06:31:31]     "exeErrorCode": 65,
[2025-11-25 06:31:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 06:31:31]     "pilotErrorCode": 1305,
[2025-11-25 06:31:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 06:31:31]  *** Listing of results directory ***
[2025-11-25 06:31:31] total 406344
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc    576529 Nov 24 20:09 pilot3.tar.gz
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc      5112 Nov 24 20:26 queuedata.json
[2025-11-25 06:31:31] -rwx------. 1 boinc boinc     36292 Nov 24 20:27 runpilot2-wrapper.sh
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc       100 Nov 25 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:31:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 06:25 run_atlas
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc       105 Nov 25 06:25 job.xml
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc 411876940 Nov 25 06:25 EVNT.47483658._001509.pool.root.1
[2025-11-25 06:31:31] drwxrwx--x. 2 boinc boinc      4096 Nov 25 06:25 shared
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc    590110 Nov 25 06:25 input.tar.gz
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc      6594 Nov 25 06:25 init_data.xml
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:25 start_atlas.sh
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc         0 Nov 25 06:25 boinc_lockfile
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc      2785 Nov 25 06:25 pandaJob.out
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc    991909 Nov 25 06:25 agis_schedconf.cvmfs.json
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc   1516240 Nov 25 06:25 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:31:31] drwx------. 5 boinc boinc      4096 Nov 25 06:25 pilot3
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc       525 Nov 25 06:27 boinc_task_state.xml
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc      1022 Nov 25 06:28 memory_monitor_summary.json
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc     49556 Nov 25 06:28 log.47556149._004956.job.log.tgz.1
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc     10339 Nov 25 06:30 heartbeat.json
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc        95 Nov 25 06:30 pilot_heartbeat.json
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc      8192 Nov 25 06:31 boinc_mmap_file
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc        23 Nov 25 06:31 wrapper_checkpoint.txt
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc      4821 Nov 25 06:31 pilotlog.txt
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc    104948 Nov 25 06:31 log.47556149._004956.job.log.1
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc       186 Nov 25 06:31 output.list
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc       620 Nov 25 06:31 runtime_log
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc    174080 Nov 25 06:31 result.tar.gz
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc      8636 Nov 25 06:31 runtime_log.err
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc       645 Nov 25 06:31 QJzMDmlpzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG7LKDm8IH6Lo.diag
[2025-11-25 06:31:31] -rw-r--r--. 1 boinc boinc     22536 Nov 25 06:31 stderr.txt
[2025-11-25 06:31:31] No HITS result produced
[2025-11-25 06:31:31]  *** Contents of shared directory: ***
[2025-11-25 06:31:31] total 402992
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc 411876940 Nov 25 06:25 ATLAS.root_0
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc    590110 Nov 25 06:25 input.tar.gz
[2025-11-25 06:31:31] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:25 start_atlas.sh
[2025-11-25 06:31:31] -rw-------. 1 boinc boinc    174080 Nov 25 06:31 result.tar.gz
06:31:33 (8134): run_atlas exited; CPU time 46.935586
06:31:33 (8134): called boinc_finish(0)

</stderr_txt>
]]>

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