Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:57:03 (109115): wrapper (7.7.26015): starting
23:57:03 (109115): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:57:03] Arguments: --nthreads 8
[2025-11-25 23:57:03] Threads: 8
[2025-11-25 23:57:03] Checking for CVMFS
[2025-11-25 23:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:57:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:57:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:57:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:57:05] 2.13.3.0 15513 29546 379692 153309 3 141 21753826 40960000 42743 16776704 0 292937554 99.867 97696750 31738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:57:05] CVMFS is ok
[2025-11-25 23:57:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:57:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:57:05] Further information can be found at the LHC@home message board.
[2025-11-25 23:57:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:57:05] Checking for apptainer binary...
[2025-11-25 23:57:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:57:05] Running /usr/bin/apptainer --version
[2025-11-25 23:57:05] apptainer version 1.4.4-1.el9
[2025-11-25 23:57:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:57:06] c-1-1.aglt2.org
[2025-11-25 23:57:06] apptainer works
[2025-11-25 23:57:06] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:57:06] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:57:06] Starting ATLAS job with PandaID=6895883519
[2025-11-25 23:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:43:13]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:43:13] 2025-11-27 00:42:01,426 | INFO     | time since job start (71063s) is within the limit (172800.0s)
[2025-11-26 19:43:13] 2025-11-27 00:42:02,873 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 19:43:13] 2025-11-27 00:42:02,909 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2934.0449
[2025-11-26 19:43:13] 2025-11-27 00:42:02,969 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895883519/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 19:43:13] 2025-11-27 00:42:02,974 | INFO     | extracted standard info from prmon json
[2025-11-26 19:43:13] 2025-11-27 00:42:02,974 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:43:13] 2025-11-27 00:42:02,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:43:13] 2025-11-27 00:42:03,002 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:43:13] 2025-11-27 00:42:03,011 | INFO     | sum of square deviations: 489019318151.3475
[2025-11-26 19:43:13] 2025-11-27 00:42:03,040 | INFO     | sum of deviations: 2831508407274.8296
[2025-11-26 19:43:13] 2025-11-27 00:42:03,040 | INFO     | mean x: 1764168597.9243987
[2025-11-26 19:43:13] 2025-11-27 00:42:03,041 | INFO     | mean y: 2937979.963917526
[2025-11-26 19:43:13] 2025-11-27 00:42:03,041 | INFO     | intersect: -10211910455.383972
[2025-11-26 19:43:13] 2025-11-27 00:42:03,042 | INFO     | chi2: 9.071320658600659
[2025-11-26 19:43:13] 2025-11-27 00:42:03,043 | INFO     | sum of square deviations: 482744896876.1589
[2025-11-26 19:43:13] 2025-11-27 00:42:03,112 | INFO     | sum of deviations: 3239533718595.728
[2025-11-26 19:43:13] 2025-11-27 00:42:03,113 | INFO     | mean x: 1764168445.4305437
[2025-11-26 19:43:13] 2025-11-27 00:42:03,113 | INFO     | mean y: 2947896.369283865
[2025-11-26 19:43:13] 2025-11-27 00:42:03,113 | INFO     | intersect: -11835775208.187893
[2025-11-26 19:43:13] 2025-11-27 00:42:03,114 | INFO     | chi2: 5.715783206625034
[2025-11-26 19:43:13] 2025-11-27 00:42:03,114 | INFO     | current chi2=5.715783206625034 (change=36.990616672713344 %)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,116 | INFO     | sum of square deviations: 476524383588.38153
[2025-11-26 19:43:13] 2025-11-27 00:42:03,140 | INFO     | sum of deviations: 3596300992199.2026
[2025-11-26 19:43:13] 2025-11-27 00:42:03,140 | INFO     | mean x: 1764168292.9367418
[2025-11-26 19:43:13] 2025-11-27 00:42:03,140 | INFO     | mean y: 2956635.5918544196
[2025-11-26 19:43:13] 2025-11-27 00:42:03,141 | INFO     | intersect: -13311115845.90176
[2025-11-26 19:43:13] 2025-11-27 00:42:03,142 | INFO     | chi2: 2.87282448891881
[2025-11-26 19:43:13] 2025-11-27 00:42:03,142 | INFO     | current chi2=2.87282448891881 (change=49.73874296721078 %)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,143 | INFO     | sum of square deviations: 470357475455.40137
[2025-11-26 19:43:13] 2025-11-27 00:42:03,168 | INFO     | sum of deviations: 3701956905732.1807
[2025-11-26 19:43:13] 2025-11-27 00:42:03,169 | INFO     | mean x: 1764168140.4421237
[2025-11-26 19:43:13] 2025-11-27 00:42:03,169 | INFO     | mean y: 2959245.859878155
[2025-11-26 19:43:13] 2025-11-27 00:42:03,169 | INFO     | intersect: -13881957591.188812
[2025-11-26 19:43:13] 2025-11-27 00:42:03,170 | INFO     | chi2: 2.4810875972829636
[2025-11-26 19:43:13] 2025-11-27 00:42:03,170 | INFO     | current chi2=2.4810875972829636 (change=13.635949329549083 %)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,171 | INFO     | right removable region: 1148
[2025-11-26 19:43:13] 2025-11-27 00:42:03,172 | INFO     | sum of square deviations: 482743956258.0191
[2025-11-26 19:43:13] 2025-11-27 00:42:03,197 | INFO     | sum of deviations: 2506836959866.7935
[2025-11-26 19:43:13] 2025-11-27 00:42:03,197 | INFO     | mean x: 1764168750.4296808
[2025-11-26 19:43:13] 2025-11-27 00:42:03,197 | INFO     | mean y: 2945861.3839516826
[2025-11-26 19:43:13] 2025-11-27 00:42:03,197 | INFO     | intersect: -9158190947.66062
[2025-11-26 19:43:13] 2025-11-27 00:42:03,198 | INFO     | chi2: 6.855188494769278
[2025-11-26 19:43:13] 2025-11-27 00:42:03,199 | INFO     | current chi2=6.855188494769278 (change=24.430093998829502 %)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,199 | INFO     | left removable region: 10
[2025-11-26 19:43:13] 2025-11-27 00:42:03,200 | INFO     | sum of square deviations: 456976272324.14557
[2025-11-26 19:43:13] 2025-11-27 00:42:03,224 | INFO     | sum of deviations: 3288875018288.0513
[2025-11-26 19:43:13] 2025-11-27 00:42:03,224 | INFO     | mean x: 1764168414.949912
[2025-11-26 19:43:13] 2025-11-27 00:42:03,224 | INFO     | mean y: 2969233.509666081
[2025-11-26 19:43:13] 2025-11-27 00:42:03,224 | INFO     | intersect: -12693815653.093784
[2025-11-26 19:43:13] 2025-11-27 00:42:03,226 | INFO     | chi2: 0.19219100679497245
[2025-11-26 19:43:13] 2025-11-27 00:42:03,226 | INFO     | current memory leak: 7.20 B/s (using 1138 data points, chi2=0.19)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | could have reported an average CPU frequency of 2927 MHz (42 samples)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | ..............................
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | . Timing measurements:
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | . get job = 0 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | . initial setup = 4 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,227 | INFO     | . payload setup = 18 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,228 | INFO     | . stage-in = 0 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,228 | INFO     | . payload execution = 70971 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,228 | INFO     | . stage-out = 5 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,228 | INFO     | . log creation = 1 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,228 | INFO     | ..............................
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | 
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | job summary report
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | --------------------------------------------------
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | PanDA job id: 6895883519
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | task id: 47556161
[2025-11-26 19:43:13] 2025-11-27 00:42:03,407 | INFO     | errors: (none)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | pilot state: finished 
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | transexitcode: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | exeerrorcode: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | exeerrordiag: 
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | exitcode: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | exitmsg: OK
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | cpuconsumptiontime: 261930 s
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | nevents: 1000
[2025-11-26 19:43:13] 2025-11-27 00:42:03,408 | INFO     | neventsw: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | pid: 121381
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | pgrp: 121381
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | corecount: 8
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | event service: False
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | sizes: {0: 2284086, 1: 2284341, 12: 2284341, 17: 2284631, 23: 2284659, 70994: 2341231, 71001: 2350281, 71028: 2350471}
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | --------------------------------------------------
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | 
[2025-11-26 19:43:13] 2025-11-27 00:42:03,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 19:43:13] 2025-11-27 00:42:03,434 | INFO     | time since job start (71065s) is within the limit (172800.0s)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:43:13] 2025-11-27 00:42:03,526 | INFO     | job 6895883519 has completed (purged errors)
[2025-11-26 19:43:13] 2025-11-27 00:42:03,526 | INFO     | overall cleanup function is called
[2025-11-26 19:43:13] 2025-11-27 00:42:04,572 | INFO     | --- collectZombieJob: --- 10, [121381]
[2025-11-26 19:43:13] 2025-11-27 00:42:04,572 | INFO     | zombie collector waiting for pid 121381
[2025-11-26 19:43:13] 2025-11-27 00:42:04,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:43:13] 2025-11-27 00:42:04,572 | INFO     | collected zombie processes
[2025-11-26 19:43:13] 2025-11-27 00:42:04,572 | INFO     | will attempt to kill all subprocesses of pid=121381
[2025-11-26 19:43:13] 2025-11-27 00:42:06,285 | INFO     | process IDs to be killed: [121381] (in reverse order)
[2025-11-26 19:43:13] 2025-11-27 00:42:06,624 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:43:13] 2025-11-27 00:42:06,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:43:13] 2025-11-27 00:42:06,664 | INFO     | did not find any defunct processes belonging to 121381
[2025-11-26 19:43:13] 2025-11-27 00:42:06,692 | INFO     | did not find any defunct processes belonging to 121381
[2025-11-26 19:43:13] 2025-11-27 00:42:06,693 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:43:13] 2025-11-27 00:42:06,693 | INFO     | ready for new job
[2025-11-26 19:43:13] 2025-11-27 00:42:06,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:43:13] 2025-11-27 00:42:06,699 | INFO     | ***************************************
[2025-11-26 19:43:13] 2025-11-27 00:42:06,699 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:43:13] 2025-11-27 00:42:06,699 | INFO     | ***************************************
[2025-11-26 19:43:13] 2025-11-27 00:42:06,700 | INFO     | 
[2025-11-26 19:43:13] 2025-11-27 00:42:06,704 | INFO     | architecture information:
[2025-11-26 19:43:13] 2025-11-27 00:42:06,704 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:43:13] 2025-11-27 00:42:06,754 | INFO     | cat /etc/os-release:
[2025-11-26 19:43:13] NAME="CentOS Linux"
[2025-11-26 19:43:13] VERSION="7 (Core)"
[2025-11-26 19:43:13] ID="centos"
[2025-11-26 19:43:13] ID_LIKE="rhel fedora"
[2025-11-26 19:43:13] VERSION_ID="7"
[2025-11-26 19:43:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:43:13] ANSI_COLOR="0;31"
[2025-11-26 19:43:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:43:13] HOME_URL="https://www.centos.org/"
[2025-11-26 19:43:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:43:13] 
[2025-11-26 19:43:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:43:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:43:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:43:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:43:13] 
[2025-11-26 19:43:13] 2025-11-27 00:42:06,754 | INFO     | ***************************************
[2025-11-26 19:43:13] 2025-11-27 00:42:07,266 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 19:43:13] 2025-11-27 00:42:07,303 | INFO     | sufficient remaining disk space (99045343232 B)
[2025-11-26 19:43:13] 2025-11-27 00:42:07,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:43:13] 2025-11-27 00:42:07,304 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:43:13] 2025-11-27 00:42:07,304 | INFO     | update_server=False
[2025-11-26 19:43:13] 2025-11-27 00:42:07,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:43:13] 2025-11-27 00:42:07,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:43:13] 2025-11-27 00:42:07,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:43:13] 2025-11-27 00:42:07,317 | INFO     | aborting loop
[2025-11-26 19:43:13] 2025-11-27 00:42:07,666 | INFO     | all data control threads have been joined
[2025-11-26 19:43:13] 2025-11-27 00:42:07,797 | INFO     | all payload control threads have been joined
[2025-11-26 19:43:13] 2025-11-27 00:42:08,310 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,322 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,337 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:43:13] 2025-11-27 00:42:08,672 | INFO     | [data] control thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,726 | INFO     | all job control threads have been joined
[2025-11-26 19:43:13] 2025-11-27 00:42:08,731 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,803 | INFO     | [payload] control thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:08,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,052 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,075 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:43:13] 2025-11-27 00:42:09,324 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,375 | INFO     | [job] validate thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,431 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,537 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,639 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:09,734 | INFO     | [job] control thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:13,148 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:43:13] 2025-11-27 00:42:37,767 | INFO     | PID=112902 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 19:43:13] 2025-11-27 00:42:37,767 | INFO     | .. there are 78 such processes running
[2025-11-26 19:43:13] 2025-11-27 00:42:37,768 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:43:13] 2025-11-27 00:42:37,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:43:13] 2025-11-27 00:42:37,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:43:13] 2025-11-27 00:42:41,843 [wrapper] supervise_pilot (15 min periods counter: 80)
[2025-11-26 19:43:13] 2025-11-27 00:42:45,665 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:43:13] 2025-11-27 00:42:46,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961496717120)>', '<ExcThread(monitor, started 139960678074112)>']
[2025-11-26 19:43:13] 2025-11-27 00:42:46,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:43:13] 2025-11-27 00:42:46,859 | INFO     | [monitor] control thread has ended
[2025-11-26 19:43:13] 2025-11-27 00:42:51,581 | INFO     | all workflow threads have been joined
[2025-11-26 19:43:13] 2025-11-27 00:42:51,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:43:13] 2025-11-27 00:42:51,581 | INFO     | traces error code: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:51,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:43:13] 2025-11-27 00:42:52,110 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:43:13] 2025-11-27 00:42:52,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:43:13] 2025-11-27 00:42:52,139 [wrapper] pilotpid: 112902
[2025-11-26 19:43:13] 2025-11-27 00:42:52,169 [wrapper] Pilot exit status: 0
[2025-11-26 19:43:13] 2025-11-27 00:42:52,238 [wrapper] pandaids: 6895883519
[2025-11-26 19:43:13] 2025-11-27 00:42:52,745 [wrapper] cleanup supervisor_pilot 3752800 112903
[2025-11-26 19:43:13] 2025-11-27 00:42:52,776 [wrapper] Test setup, not cleaning
[2025-11-26 19:43:13] 2025-11-27 00:42:52,820 [wrapper] apfmon messages muted
[2025-11-26 19:43:13] 2025-11-27 00:42:52,850 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:43:13] 2025-11-27 00:42:52,860 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:43:13]  *** Error codes and diagnostics ***
[2025-11-26 19:43:13]     "exeErrorCode": 0,
[2025-11-26 19:43:13]     "exeErrorDiag": "",
[2025-11-26 19:43:13]     "pilotErrorCode": 0,
[2025-11-26 19:43:13]     "pilotErrorDiag": "",
[2025-11-26 19:43:13]  *** Listing of results directory ***
[2025-11-26 19:43:13] total 1322448
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-26 19:43:13] -rwx------. 1 boincer umatlas     36292 Nov 24 11:46 runpilot2-wrapper.sh
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:46 queuedata.json
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:43:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:57 run_atlas
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:57 job.xml
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas 408763292 Nov 25 23:57 EVNT.47483658._002055.pool.root.1
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:57 start_atlas.sh
[2025-11-26 19:43:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:57 shared
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 23:57 input.tar.gz
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:57 boinc_lockfile
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 23:57 pandaJob.out
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas        57 Nov 25 23:57 setup.sh.local
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas    991877 Nov 25 23:57 agis_schedconf.cvmfs.json
[2025-11-26 19:43:13] drwx------. 5 boincer umatlas      4096 Nov 25 23:57 pilot3
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:26 boinc_task_state.xml
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas      6841 Nov 26 19:38 init_data.xml
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas 920285368 Nov 26 19:40 HITS.47556161._000388.pool.root.1
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas      1058 Nov 26 19:41 memory_monitor_summary.json
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas   2217745 Nov 26 19:41 log.47556161._000388.job.log.tgz.1
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas        95 Nov 26 19:41 pilot_heartbeat.json
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas      8612 Nov 26 19:42 heartbeat.json
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas      4823 Nov 26 19:42 pilotlog.txt
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas   8392389 Nov 26 19:42 log.47556161._000388.job.log.1
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas       353 Nov 26 19:42 output.list
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:42 runtime_log
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas  10629120 Nov 26 19:42 result.tar.gz
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas       657 Nov 26 19:42 xnHKDmvsoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXmLKDmI0JrEn.diag
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 19:42 runtime_log.err
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:43 wrapper_checkpoint.txt
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:43 boinc_mmap_file
[2025-11-26 19:43:13] -rw-r--r--. 1 boincer umatlas     21284 Nov 26 19:43 stderr.txt
[2025-11-26 19:43:13] HITS file was successfully produced:
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas 920285368 Nov 26 19:40 shared/HITS.pool.root.1
[2025-11-26 19:43:13]  *** Contents of shared directory: ***
[2025-11-26 19:43:13] total 1308884
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas 408763292 Nov 25 23:57 ATLAS.root_0
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:57 start_atlas.sh
[2025-11-26 19:43:13] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 23:57 input.tar.gz
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas 920285368 Nov 26 19:40 HITS.pool.root.1
[2025-11-26 19:43:13] -rw-------. 1 boincer umatlas  10629120 Nov 26 19:42 result.tar.gz
19:43:14 (109115): run_atlas exited; CPU time 265879.161065
19:43:14 (109115): called boinc_finish(0)

</stderr_txt>
]]>

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