Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:14:32 (1309755): wrapper (7.7.26015): starting
19:14:32 (1309755): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 19:14:32] Arguments: --nthreads 10
[2025-11-25 19:14:32] Threads: 10
[2025-11-25 19:14:32] Checking for CVMFS
[2025-11-25 19:14:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:14:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:14:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:14:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:14:33] 2.13.3.0 11561 27619 164172 153302 2 294 23874402 32935937 23475 16776704 0 159405551 99.793 81637835 32136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:14:33] CVMFS is ok
[2025-11-25 19:14:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:14:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:14:33] Further information can be found at the LHC@home message board.
[2025-11-25 19:14:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:14:33] Checking for apptainer binary...
[2025-11-25 19:14:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:14:33] Running /usr/bin/apptainer --version
[2025-11-25 19:14:33] apptainer version 1.4.4-1.el9
[2025-11-25 19:14:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:14:33] c-8-14.aglt2.org
[2025-11-25 19:14:33] apptainer works
[2025-11-25 19:14:33] Set ATHENA_PROC_NUMBER=10
[2025-11-25 19:14:33] Set ATHENA_CORE_NUMBER=10
[2025-11-25 19:14:33] Starting ATLAS job with PandaID=6893850786
[2025-11-25 19:14:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:23:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:23:12] 2025-11-26 19:22:35,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:23:12] 2025-11-26 19:22:35,708 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:23:12] 2025-11-26 19:22:35,720 | INFO     | sum of square deviations: 445049334705.86847
[2025-11-26 14:23:12] 2025-11-26 19:22:35,821 | INFO     | sum of deviations: 2157755397564.844
[2025-11-26 14:23:12] 2025-11-26 19:22:35,821 | INFO     | mean x: 1764150487.1932623
[2025-11-26 14:23:12] 2025-11-26 19:22:35,821 | INFO     | mean y: 3337119.216312057
[2025-11-26 14:23:12] 2025-11-26 19:22:35,821 | INFO     | intersect: -8549883701.512884
[2025-11-26 14:23:12] 2025-11-26 19:22:35,823 | INFO     | chi2: 11.720460110016282
[2025-11-26 14:23:12] 2025-11-26 19:22:35,830 | INFO     | sum of square deviations: 439157937001.46967
[2025-11-26 14:23:12] 2025-11-26 19:22:35,942 | INFO     | sum of deviations: 2608916493063.463
[2025-11-26 14:23:12] 2025-11-26 19:22:35,942 | INFO     | mean x: 1764150334.7008014
[2025-11-26 14:23:12] 2025-11-26 19:22:35,942 | INFO     | mean y: 3348795.7097061444
[2025-11-26 14:23:12] 2025-11-26 19:22:35,942 | INFO     | intersect: -10476983031.76435
[2025-11-26 14:23:12] 2025-11-26 19:22:35,944 | INFO     | chi2: 8.313594691902303
[2025-11-26 14:23:12] 2025-11-26 19:22:35,944 | INFO     | current chi2=8.313594691902303 (change=29.06767640634243 %)
[2025-11-26 14:23:12] 2025-11-26 19:22:35,945 | INFO     | sum of square deviations: 433318772834.4413
[2025-11-26 14:23:12] 2025-11-26 19:22:36,040 | INFO     | sum of deviations: 3123135481828.0044
[2025-11-26 14:23:12] 2025-11-26 19:22:36,041 | INFO     | mean x: 1764150182.2084079
[2025-11-26 14:23:12] 2025-11-26 19:22:36,041 | INFO     | mean y: 3362224.446332737
[2025-11-26 14:23:12] 2025-11-26 19:22:36,041 | INFO     | intersect: -12711711238.187859
[2025-11-26 14:23:12] 2025-11-26 19:22:36,051 | INFO     | chi2: 4.103183458605496
[2025-11-26 14:23:12] 2025-11-26 19:22:36,051 | INFO     | current chi2=4.103183458605496 (change=50.64489416831779 %)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,057 | INFO     | sum of square deviations: 427531609642.283
[2025-11-26 14:23:12] 2025-11-26 19:22:36,133 | INFO     | sum of deviations: 3362492072633.0234
[2025-11-26 14:23:12] 2025-11-26 19:22:36,133 | INFO     | mean x: 1764150029.7160826
[2025-11-26 14:23:12] 2025-11-26 19:22:36,133 | INFO     | mean y: 3368530.2722371966
[2025-11-26 14:23:12] 2025-11-26 19:22:36,133 | INFO     | intersect: -13871489740.017796
[2025-11-26 14:23:12] 2025-11-26 19:22:36,139 | INFO     | chi2: 3.028672420226481
[2025-11-26 14:23:12] 2025-11-26 19:22:36,139 | INFO     | current chi2=3.028672420226481 (change=26.18725312234022 %)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,140 | INFO     | sum of square deviations: 421796146849.93787
[2025-11-26 14:23:12] 2025-11-26 19:22:36,186 | INFO     | sum of deviations: 3470407375469.5605
[2025-11-26 14:23:12] 2025-11-26 19:22:36,187 | INFO     | mean x: 1764149877.2229242
[2025-11-26 14:23:12] 2025-11-26 19:22:36,187 | INFO     | mean y: 3371396.7102888087
[2025-11-26 14:23:12] 2025-11-26 19:22:36,187 | INFO     | intersect: -14511504547.678766
[2025-11-26 14:23:12] 2025-11-26 19:22:36,188 | INFO     | chi2: 2.69101276699215
[2025-11-26 14:23:12] 2025-11-26 19:22:36,189 | INFO     | current chi2=2.69101276699215 (change=11.148767723419924 %)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,189 | INFO     | right removable region: 1107
[2025-11-26 14:23:12] 2025-11-26 19:22:36,190 | INFO     | sum of square deviations: 439156909156.2605
[2025-11-26 14:23:12] 2025-11-26 19:22:36,278 | INFO     | sum of deviations: 1823109388180.0012
[2025-11-26 14:23:12] 2025-11-26 19:22:36,278 | INFO     | mean x: 1764150639.6990204
[2025-11-26 14:23:12] 2025-11-26 19:22:36,278 | INFO     | mean y: 3345769.7248441675
[2025-11-26 14:23:12] 2025-11-26 19:22:36,278 | INFO     | intersect: -7320322664.81785
[2025-11-26 14:23:12] 2025-11-26 19:22:36,280 | INFO     | chi2: 9.729862534759274
[2025-11-26 14:23:12] 2025-11-26 19:22:36,280 | INFO     | current chi2=9.729862534759274 (change=16.983954184152267 %)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,280 | INFO     | left removable region: 10
[2025-11-26 14:23:12] 2025-11-26 19:22:36,282 | INFO     | sum of square deviations: 409357364408.2748
[2025-11-26 14:23:12] 2025-11-26 19:22:36,315 | INFO     | sum of deviations: 3018117303082.5254
[2025-11-26 14:23:12] 2025-11-26 19:22:36,316 | INFO     | mean x: 1764150151.7338195
[2025-11-26 14:23:12] 2025-11-26 19:22:36,316 | INFO     | mean y: 3383243.2689152234
[2025-11-26 14:23:12] 2025-11-26 19:22:36,316 | INFO     | intersect: -13003374570.603395
[2025-11-26 14:23:12] 2025-11-26 19:22:36,317 | INFO     | chi2: 0.5728404609066186
[2025-11-26 14:23:12] 2025-11-26 19:22:36,318 | INFO     | current memory leak: 7.37 B/s (using 1097 data points, chi2=0.57)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | ..............................
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | . Timing measurements:
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | . get job = 0 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | . initial setup = 2 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | . payload setup = 6 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,319 | INFO     | . stage-in = 0 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,320 | INFO     | . payload execution = 68798 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,320 | INFO     | . stage-out = 8 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,320 | INFO     | . log creation = 2 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,320 | INFO     | ..............................
[2025-11-26 14:23:12] 2025-11-26 19:22:36,602 | INFO     | time since job start (68872s) is within the limit (172800.0s)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | 
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | job summary report
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | --------------------------------------------------
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | PanDA job id: 6893850786
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | task id: 47523449
[2025-11-26 14:23:12] 2025-11-26 19:22:36,759 | INFO     | errors: (none)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | pilot state: finished 
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | transexitcode: 0
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | exeerrorcode: 0
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | exeerrordiag: 
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | exitcode: 0
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | exitmsg: OK
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | cpuconsumptiontime: 308044 s
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | nevents: 1000
[2025-11-26 14:23:12] 2025-11-26 19:22:36,760 | INFO     | neventsw: 0
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | pid: 1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | pgrp: 1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | corecount: 10
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | event service: False
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | sizes: {0: 2284309, 4: 2284571, 11: 2284599, 68810: 2340846, 68819: 2349840, 68822: 2349896, 68856: 2350366}
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | --------------------------------------------------
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | 
[2025-11-26 14:23:12] 2025-11-26 19:22:36,761 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 14:23:12] 2025-11-26 19:22:36,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:23:12] 2025-11-26 19:22:36,840 | INFO     | job 6893850786 has completed (purged errors)
[2025-11-26 14:23:12] 2025-11-26 19:22:36,840 | INFO     | overall cleanup function is called
[2025-11-26 14:23:12] 2025-11-26 19:22:37,874 | INFO     | --- collectZombieJob: --- 10, [1320537]
[2025-11-26 14:23:12] 2025-11-26 19:22:37,874 | INFO     | zombie collector waiting for pid 1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:37,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:23:12] 2025-11-26 19:22:37,874 | INFO     | collected zombie processes
[2025-11-26 14:23:12] 2025-11-26 19:22:37,874 | INFO     | will attempt to kill all subprocesses of pid=1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:38,758 | INFO     | process IDs to be killed: [1320537] (in reverse order)
[2025-11-26 14:23:12] 2025-11-26 19:22:39,030 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:23:12] 2025-11-26 19:22:39,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:23:12] 2025-11-26 19:22:39,070 | INFO     | did not find any defunct processes belonging to 1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:39,110 | INFO     | did not find any defunct processes belonging to 1320537
[2025-11-26 14:23:12] 2025-11-26 19:22:39,111 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:23:12] 2025-11-26 19:22:39,111 | INFO     | ready for new job
[2025-11-26 14:23:12] 2025-11-26 19:22:39,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:23:12] 2025-11-26 19:22:39,120 | INFO     | ***************************************
[2025-11-26 14:23:12] 2025-11-26 19:22:39,121 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:23:12] 2025-11-26 19:22:39,121 | INFO     | ***************************************
[2025-11-26 14:23:12] 2025-11-26 19:22:39,121 | INFO     | 
[2025-11-26 14:23:12] 2025-11-26 19:22:39,123 | INFO     | architecture information:
[2025-11-26 14:23:12] 2025-11-26 19:22:39,128 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:23:12] 2025-11-26 19:22:39,166 | INFO     | cat /etc/os-release:
[2025-11-26 14:23:12] NAME="CentOS Linux"
[2025-11-26 14:23:12] VERSION="7 (Core)"
[2025-11-26 14:23:12] ID="centos"
[2025-11-26 14:23:12] ID_LIKE="rhel fedora"
[2025-11-26 14:23:12] VERSION_ID="7"
[2025-11-26 14:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:23:12] ANSI_COLOR="0;31"
[2025-11-26 14:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:23:12] HOME_URL="https://www.centos.org/"
[2025-11-26 14:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:23:12] 
[2025-11-26 14:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:23:12] 
[2025-11-26 14:23:12] 2025-11-26 19:22:39,166 | INFO     | ***************************************
[2025-11-26 14:23:12] 2025-11-26 19:22:39,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 14:23:12] 2025-11-26 19:22:39,727 | INFO     | sufficient remaining disk space (71119667200 B)
[2025-11-26 14:23:12] 2025-11-26 19:22:39,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:23:12] 2025-11-26 19:22:39,727 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:23:12] 2025-11-26 19:22:39,766 | INFO     | update_server=False
[2025-11-26 14:23:12] 2025-11-26 19:22:39,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:23:12] 2025-11-26 19:22:39,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:23:12] 2025-11-26 19:22:39,767 | INFO     | aborting loop
[2025-11-26 14:23:12] 2025-11-26 19:22:40,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:23:12] 2025-11-26 19:22:40,403 | INFO     | all data control threads have been joined
[2025-11-26 14:23:12] 2025-11-26 19:22:40,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:23:12] 2025-11-26 19:22:40,668 | INFO     | all payload control threads have been joined
[2025-11-26 14:23:12] 2025-11-26 19:22:40,772 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:40,772 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:40,869 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:40,874 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,017 | INFO     | [job] validate thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,260 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,332 | INFO     | all job control threads have been joined
[2025-11-26 14:23:12] 2025-11-26 19:22:41,409 | INFO     | [data] control thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,472 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,674 | INFO     | [payload] control thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,675 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:41,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:23:12] 2025-11-26 19:22:41,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:42,200 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:42,338 | INFO     | [job] control thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:42,415 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:42,782 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:44,400 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:23:12] 2025-11-26 19:22:46,706 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:23:12] 2025-11-26 19:22:48,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234711480128)>', '<ExcThread(monitor, started 140234213803776)>']
[2025-11-26 14:23:12] 2025-11-26 19:22:53,689 | INFO     | all workflow threads have been joined
[2025-11-26 14:23:12] 2025-11-26 19:22:53,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:23:12] 2025-11-26 19:22:53,689 | INFO     | traces error code: 0
[2025-11-26 14:23:12] 2025-11-26 19:22:53,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:23:12] 2025-11-26 19:23:11,139 | INFO     | PID=1313441 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:23:12] 2025-11-26 19:23:11,139 | INFO     | .. there are 44 such processes running
[2025-11-26 14:23:12] 2025-11-26 19:23:11,139 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:23:12] 2025-11-26 19:23:11,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:23:12] 2025-11-26 19:23:11,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:23:12] 2025-11-26 19:23:11,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:23:12] 2025-11-26 19:23:11,140 | INFO     | [monitor] control thread has ended
[2025-11-26 14:23:12] 2025-11-26 19:23:11,281 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:23:12] 2025-11-26 19:23:11,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:23:12] 2025-11-26 19:23:11,331 [wrapper] pilotpid: 1313441
[2025-11-26 14:23:12] 2025-11-26 19:23:11,374 [wrapper] Pilot exit status: 0
[2025-11-26 14:23:12] 2025-11-26 19:23:11,436 [wrapper] pandaids: 6893850786
[2025-11-26 14:23:12] 2025-11-26 19:23:11,711 [wrapper] cleanup supervisor_pilot 1177188 1313442
[2025-11-26 14:23:12] 2025-11-26 19:23:11,740 [wrapper] Test setup, not cleaning
[2025-11-26 14:23:12] 2025-11-26 19:23:11,788 [wrapper] apfmon messages muted
[2025-11-26 14:23:12] 2025-11-26 19:23:11,806 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:23:12] 2025-11-26 19:23:11,820 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:23:12]  *** Error codes and diagnostics ***
[2025-11-26 14:23:12]     "exeErrorCode": 0,
[2025-11-26 14:23:12]     "exeErrorDiag": "",
[2025-11-26 14:23:12]     "pilotErrorCode": 0,
[2025-11-26 14:23:12]     "pilotErrorDiag": "",
[2025-11-26 14:23:12]  *** Listing of results directory ***
[2025-11-26 14:23:12] total 1334600
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-26 14:23:12] -rwx------. 1 boincer umatlas     36292 Nov 20 06:27 runpilot2-wrapper.sh
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:27 queuedata.json
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:23:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:14 run_atlas
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:14 job.xml
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas 412373632 Nov 25 19:14 EVNT.47493127._000342.pool.root.1
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:14 start_atlas.sh
[2025-11-26 14:23:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:14 shared
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 19:14 input.tar.gz
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:14 boinc_lockfile
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 19:14 pandaJob.out
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas        57 Nov 25 19:14 setup.sh.local
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas    991877 Nov 25 19:14 agis_schedconf.cvmfs.json
[2025-11-26 14:23:12] drwx------. 5 boincer umatlas      4096 Nov 25 19:14 pilot3
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:01 boinc_task_state.xml
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas 928174544 Nov 26 14:20 HITS.47523449._003411.pool.root.1
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas      1059 Nov 26 14:21 memory_monitor_summary.json
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas   2448183 Nov 26 14:21 log.47523449._003411.job.log.tgz.1
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 14:22 init_data.xml
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas        95 Nov 26 14:22 pilot_heartbeat.json
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas      8613 Nov 26 14:22 heartbeat.json
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:23 boinc_mmap_file
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:23 wrapper_checkpoint.txt
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas       823 Nov 26 14:23 pilotlog.txt
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas   8630852 Nov 26 14:23 log.47523449._003411.job.log.1
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas       353 Nov 26 14:23 output.list
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:23 runtime_log
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas  11100160 Nov 26 14:23 result.tar.gz
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas      9335 Nov 26 14:23 runtime_log.err
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas       658 Nov 26 14:23 IzSMDmszHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdXGKDmrc23Em.diag
[2025-11-26 14:23:12] -rw-r--r--. 1 boincer umatlas     21137 Nov 26 14:23 stderr.txt
[2025-11-26 14:23:12] HITS file was successfully produced:
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas 928174544 Nov 26 14:20 shared/HITS.pool.root.1
[2025-11-26 14:23:12]  *** Contents of shared directory: ***
[2025-11-26 14:23:12] total 1320580
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas 412373632 Nov 25 19:14 ATLAS.root_0
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:14 start_atlas.sh
[2025-11-26 14:23:12] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 19:14 input.tar.gz
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas 928174544 Nov 26 14:20 HITS.pool.root.1
[2025-11-26 14:23:12] -rw-------. 1 boincer umatlas  11100160 Nov 26 14:23 result.tar.gz
14:23:13 (1309755): run_atlas exited; CPU time 310606.209047
14:23:13 (1309755): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN