Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:45:18 (726981): wrapper (7.7.26015): starting
11:45:18 (726981): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:45:18] Arguments: --nthreads 8
[2025-11-25 11:45:18] Threads: 8
[2025-11-25 11:45:18] Checking for CVMFS
[2025-11-25 11:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:45:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:45:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:45:20] 2.13.3.0 9456 28867 351088 153289 0 347 32008194 32935936 24841 16776704 0 90159646 99.415 134429449 41278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 11:45:20] CVMFS is ok
[2025-11-25 11:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:45:20] Further information can be found at the LHC@home message board.
[2025-11-25 11:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:45:20] Checking for apptainer binary...
[2025-11-25 11:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:45:20] Running /usr/bin/apptainer --version
[2025-11-25 11:45:20] apptainer version 1.4.4-1.el9
[2025-11-25 11:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:45:21] c6-5-7-2.aglt2.org
[2025-11-25 11:45:21] apptainer works
[2025-11-25 11:45:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:45:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:45:21] Starting ATLAS job with PandaID=6895882325
[2025-11-25 11:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:04:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:04:48] 2025-11-26 10:17:52,552 | INFO     | time since job start (63115s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:17:54,428 | INFO     | monitor loop #3971: job 0:6895882325 is in state 'finished'
[2025-11-26 11:04:48] 2025-11-26 10:17:54,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:04:48] 2025-11-26 10:17:54,560 | INFO     | time since job start (63117s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:17:56,566 | INFO     | time since job start (63119s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:17:56,954 | INFO     | monitor loop #3972: job 0:6895882325 is in state 'finished'
[2025-11-26 11:04:48] 2025-11-26 10:17:56,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:04:48] 2025-11-26 10:17:58,573 | INFO     | time since job start (63121s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:17:59,497 | INFO     | monitor loop #3973: job 0:6895882325 is in state 'finished'
[2025-11-26 11:04:48] 2025-11-26 10:17:59,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:04:48] 2025-11-26 10:18:00,617 | INFO     | time since job start (63123s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,023 | INFO     | monitor loop #3974: job 0:6895882325 is in state 'finished'
[2025-11-26 11:04:48] 2025-11-26 10:18:02,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,339 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 11:04:48] 2025-11-26 10:18:02,355 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3019.979017857142
[2025-11-26 11:04:48] 2025-11-26 10:18:02,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895882325/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,377 | INFO     | extracted standard info from prmon json
[2025-11-26 11:04:48] 2025-11-26 10:18:02,377 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:04:48] 2025-11-26 10:18:02,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:04:48] 2025-11-26 10:18:02,404 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:04:48] 2025-11-26 10:18:02,416 | INFO     | sum of square deviations: 341749089000.6544
[2025-11-26 11:04:48] 2025-11-26 10:18:02,454 | INFO     | sum of deviations: 95684605901.9713
[2025-11-26 11:04:48] 2025-11-26 10:18:02,454 | INFO     | mean x: 1764120716.9351404
[2025-11-26 11:04:48] 2025-11-26 10:18:02,454 | INFO     | mean y: 2849168.1936108423
[2025-11-26 11:04:48] 2025-11-26 10:18:02,454 | INFO     | intersect: -491078104.75697994
[2025-11-26 11:04:48] 2025-11-26 10:18:02,459 | INFO     | chi2: 20.896815217360636
[2025-11-26 11:04:48] 2025-11-26 10:18:02,461 | INFO     | sum of square deviations: 336810702502.3697
[2025-11-26 11:04:48] 2025-11-26 10:18:02,514 | INFO     | sum of deviations: 427220567456.7225
[2025-11-26 11:04:48] 2025-11-26 10:18:02,514 | INFO     | mean x: 1764120564.4494164
[2025-11-26 11:04:48] 2025-11-26 10:18:02,514 | INFO     | mean y: 2859402.6196498056
[2025-11-26 11:04:48] 2025-11-26 10:18:02,514 | INFO     | intersect: -2234802830.221216
[2025-11-26 11:04:48] 2025-11-26 10:18:02,515 | INFO     | chi2: 17.675809342999216
[2025-11-26 11:04:48] 2025-11-26 10:18:02,515 | INFO     | current chi2=17.675809342999216 (change=15.413860154563055 %)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,516 | INFO     | right removable region: 1027
[2025-11-26 11:04:48] 2025-11-26 10:18:02,517 | INFO     | sum of square deviations: 336808915756.26685
[2025-11-26 11:04:48] 2025-11-26 10:18:02,558 | INFO     | sum of deviations: -174177672011.0022
[2025-11-26 11:04:48] 2025-11-26 10:18:02,559 | INFO     | mean x: 1764120869.4484437
[2025-11-26 11:04:48] 2025-11-26 10:18:02,559 | INFO     | mean y: 2857489.0
[2025-11-26 11:04:48] 2025-11-26 10:18:02,559 | INFO     | intersect: 915156575.550644
[2025-11-26 11:04:48] 2025-11-26 10:18:02,560 | INFO     | chi2: 18.837523293509236
[2025-11-26 11:04:48] 2025-11-26 10:18:02,560 | INFO     | current chi2=18.837523293509236 (change=9.854573064993101 %)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,560 | INFO     | left removable region: 10
[2025-11-26 11:04:48] 2025-11-26 10:18:02,566 | INFO     | sum of square deviations: 326110908436.3858
[2025-11-26 11:04:48] 2025-11-26 10:18:02,600 | INFO     | sum of deviations: 163306857340.62646
[2025-11-26 11:04:48] 2025-11-26 10:18:02,601 | INFO     | mean x: 1764120838.9754179
[2025-11-26 11:04:48] 2025-11-26 10:18:02,601 | INFO     | mean y: 2871511.465093412
[2025-11-26 11:04:48] 2025-11-26 10:18:02,601 | INFO     | intersect: -880548891.6226584
[2025-11-26 11:04:48] 2025-11-26 10:18:02,606 | INFO     | chi2: 15.00133208053749
[2025-11-26 11:04:48] 2025-11-26 10:18:02,607 | INFO     | current memory leak: 0.50 B/s (using 1017 data points, chi2=15.00)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,608 | INFO     | could have reported an average CPU frequency of 2992 MHz (38 samples)
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | ..............................
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . Timing measurements:
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . get job = 0 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . initial setup = 3 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . payload setup = 24 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . stage-in = 0 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . payload execution = 63006 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,609 | INFO     | . stage-out = 12 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,613 | INFO     | . log creation = 3 s
[2025-11-26 11:04:48] 2025-11-26 10:18:02,613 | INFO     | ..............................
[2025-11-26 11:04:48] 2025-11-26 10:18:02,639 | INFO     | time since job start (63125s) is within the limit (172800.0s)
[2025-11-26 11:04:48] 2025-11-26 10:18:03,007 | INFO     | 
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | job summary report
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | --------------------------------------------------
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | PanDA job id: 6895882325
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | task id: 47556161
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | errors: (none)
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | pilot state: finished 
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | transexitcode: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | exeerrorcode: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | exeerrordiag: 
[2025-11-26 11:04:48] 2025-11-26 10:18:03,008 | INFO     | exitcode: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | exitmsg: OK
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | cpuconsumptiontime: 234979 s
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | nevents: 1000
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | neventsw: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | pid: 739501
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | pgrp: 739501
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | corecount: 8
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | event service: False
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | sizes: {0: 2284141, 1: 2284340, 12: 2284340, 16: 2284630, 23: 2284658, 63034: 2339462, 63035: 2339589, 63048: 2348639, 63051: 2348695, 63087: 2348941}
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | --------------------------------------------------
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | 
[2025-11-26 11:04:48] 2025-11-26 10:18:03,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 11:04:48] 2025-11-26 10:18:03,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | job 6895882325 has completed (purged errors)
[2025-11-26 11:04:48] 2025-11-26 10:18:03,105 | INFO     | overall cleanup function is called
[2025-11-26 11:04:48] 2025-11-26 10:18:04,156 | INFO     | --- collectZombieJob: --- 10, [739501]
[2025-11-26 11:04:48] 2025-11-26 10:18:04,156 | INFO     | zombie collector waiting for pid 739501
[2025-11-26 11:04:48] 2025-11-26 10:18:04,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:04:48] 2025-11-26 10:18:04,157 | INFO     | collected zombie processes
[2025-11-26 11:04:48] 2025-11-26 10:18:04,157 | INFO     | will attempt to kill all subprocesses of pid=739501
[2025-11-26 11:04:48] 2025-11-26 10:18:05,730 | INFO     | process IDs to be killed: [739501] (in reverse order)
[2025-11-26 11:04:48] 2025-11-26 10:18:06,282 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:04:48] 2025-11-26 10:18:06,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:04:48] 2025-11-26 10:18:06,315 | INFO     | did not find any defunct processes belonging to 739501
[2025-11-26 11:04:48] 2025-11-26 10:18:06,384 | INFO     | did not find any defunct processes belonging to 739501
[2025-11-26 11:04:48] 2025-11-26 10:18:06,386 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:04:48] 2025-11-26 10:18:06,386 | INFO     | ready for new job
[2025-11-26 11:04:48] 2025-11-26 10:18:06,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:04:48] 2025-11-26 10:18:06,418 | INFO     | ***************************************
[2025-11-26 11:04:48] 2025-11-26 10:18:06,418 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:04:48] 2025-11-26 10:18:06,418 | INFO     | ***************************************
[2025-11-26 11:04:48] 2025-11-26 10:18:06,418 | INFO     | 
[2025-11-26 11:04:48] 2025-11-26 10:18:06,445 | INFO     | architecture information:
[2025-11-26 11:04:48] 2025-11-26 10:18:06,450 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:04:48] 2025-11-26 10:18:06,543 | INFO     | cat /etc/os-release:
[2025-11-26 11:04:48] NAME="CentOS Linux"
[2025-11-26 11:04:48] VERSION="7 (Core)"
[2025-11-26 11:04:48] ID="centos"
[2025-11-26 11:04:48] ID_LIKE="rhel fedora"
[2025-11-26 11:04:48] VERSION_ID="7"
[2025-11-26 11:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:04:48] ANSI_COLOR="0;31"
[2025-11-26 11:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:04:48] HOME_URL="https://www.centos.org/"
[2025-11-26 11:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:04:48] 
[2025-11-26 11:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:04:48] 
[2025-11-26 11:04:48] 2025-11-26 10:18:06,544 | INFO     | ***************************************
[2025-11-26 11:04:48] 2025-11-26 10:18:07,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 11:04:48] 2025-11-26 10:18:07,151 | INFO     | sufficient remaining disk space (68057825280 B)
[2025-11-26 11:04:48] 2025-11-26 10:18:07,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:04:48] 2025-11-26 10:18:07,152 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:04:48] 2025-11-26 10:18:07,152 | INFO     | update_server=False
[2025-11-26 11:04:48] 2025-11-26 10:18:07,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:04:48] 2025-11-26 10:18:07,227 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 11:04:48] 2025-11-26 10:18:07,228 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 11:04:48] 2025-11-26 10:18:07,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:04:48] 2025-11-26 10:18:07,228 | INFO     | will abort loop
[2025-11-26 11:04:48] 2025-11-26 10:18:07,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:04:48] 2025-11-26 10:18:07,683 | INFO     | all job control threads have been joined
[2025-11-26 11:04:48] 2025-11-26 10:18:07,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:04:48] 2025-11-26 10:18:08,087 | INFO     | all data control threads have been joined
[2025-11-26 11:04:48] 2025-11-26 10:18:08,157 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:08,244 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:08,659 | INFO     | all payload control threads have been joined
[2025-11-26 11:04:48] 2025-11-26 10:18:08,663 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:08,690 | INFO     | [job] control thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:08,833 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:08,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,020 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,194 | INFO     | [data] control thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,287 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,324 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,432 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,485 | INFO     | [job] validate thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,506 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,546 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:09,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:04:48] 2025-11-26 10:18:09,665 | INFO     | [payload] control thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:13,627 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:04:48] 2025-11-26 10:18:34,733 | INFO     | 63131s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 11:04:48] 2025-11-26 10:18:41,142 | INFO     | PID=731204 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 11:04:48] 2025-11-26 10:18:41,142 | INFO     | .. there are 34 such processes running
[2025-11-26 11:04:48] 2025-11-26 10:18:41,143 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:04:48] 2025-11-26 10:18:41,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:04:48] 2025-11-26 10:18:41,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:04:48] 2025-11-26 10:18:49,320 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:04:48] 2025-11-26 10:18:50,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044649002816)>', '<ExcThread(monitor, started 140044136322816)>']
[2025-11-26 11:04:48] 2025-11-26 10:18:50,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:04:48] 2025-11-26 10:18:50,236 | INFO     | [monitor] control thread has ended
[2025-11-26 11:04:48] 2025-11-26 10:18:55,130 | INFO     | all workflow threads have been joined
[2025-11-26 11:04:48] 2025-11-26 10:18:55,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:04:48] 2025-11-26 10:18:55,135 | INFO     | traces error code: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:55,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:04:48] 2025-11-26 10:18:55,605 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:04:48] 2025-11-26 10:18:55,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:04:48] 2025-11-26 10:18:55,713 [wrapper] pilotpid: 731204
[2025-11-26 11:04:48] 2025-11-26 10:18:55,744 [wrapper] Pilot exit status: 0
[2025-11-26 11:04:48] 2025-11-26 10:18:55,867 [wrapper] pandaids: 6895882325
[2025-11-26 11:04:48] 2025-11-26 10:18:56,250 [wrapper] cleanup supervisor_pilot  110354 731205
[2025-11-26 11:04:48] 2025-11-26 10:18:56,268 [wrapper] Test setup, not cleaning
[2025-11-26 11:04:48] 2025-11-26 10:18:56,305 [wrapper] apfmon messages muted
[2025-11-26 11:04:48] 2025-11-26 10:18:56,351 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:04:48] 2025-11-26 10:18:56,379 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:04:48]  *** Error codes and diagnostics ***
[2025-11-26 11:04:48]     "exeErrorCode": 0,
[2025-11-26 11:04:48]     "exeErrorDiag": "",
[2025-11-26 11:04:48]     "pilotErrorCode": 0,
[2025-11-26 11:04:48]     "pilotErrorDiag": "",
[2025-11-26 11:04:48]  *** Listing of results directory ***
[2025-11-26 11:04:48] total 1318944
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:37 queuedata.json
[2025-11-26 11:04:48] -rwx------. 1 boincer umatlas     36292 Nov 24 11:38 runpilot2-wrapper.sh
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas       100 Nov 25 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:04:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 11:45 run_atlas
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas       105 Nov 25 11:45 job.xml
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas 411195247 Nov 25 11:45 EVNT.47483658._002053.pool.root.1
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:45 start_atlas.sh
[2025-11-26 11:04:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 11:45 shared
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 11:45 input.tar.gz
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas         0 Nov 25 11:45 boinc_lockfile
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 11:45 pandaJob.out
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas        57 Nov 25 11:45 setup.sh.local
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas    991543 Nov 25 11:45 agis_schedconf.cvmfs.json
[2025-11-26 11:04:48] drwx------. 5 boincer umatlas      4096 Nov 25 11:45 pilot3
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas       533 Nov 26 04:27 boinc_task_state.xml
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas 914764065 Nov 26 05:15 HITS.47556161._000368.pool.root.1
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas      1058 Nov 26 05:17 memory_monitor_summary.json
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas   1516240 Nov 26 05:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas   2175293 Nov 26 05:17 log.47556161._000368.job.log.tgz.1
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas      8615 Nov 26 05:18 heartbeat.json
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas        95 Nov 26 05:18 pilot_heartbeat.json
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas      5125 Nov 26 05:18 pilotlog.txt
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas   8181693 Nov 26 05:18 log.47556161._000368.job.log.1
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas       353 Nov 26 05:18 output.list
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas       620 Nov 26 05:18 runtime_log
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas  10373120 Nov 26 05:18 result.tar.gz
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 05:18 runtime_log.err
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas       660 Nov 26 05:18 rKkKDmaloh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmslLKDmhOK8Jn.diag
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 11:04 init_data.xml
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:04 boinc_mmap_file
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas        29 Nov 26 11:04 wrapper_checkpoint.txt
[2025-11-26 11:04:48] -rw-r--r--. 1 boincer umatlas     21773 Nov 26 11:04 stderr.txt
[2025-11-26 11:04:48] HITS file was successfully produced:
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas 914764065 Nov 26 05:15 shared/HITS.pool.root.1
[2025-11-26 11:04:48]  *** Contents of shared directory: ***
[2025-11-26 11:04:48] total 1305624
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas 411195247 Nov 25 11:45 ATLAS.root_0
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:45 start_atlas.sh
[2025-11-26 11:04:48] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 11:45 input.tar.gz
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas 914764065 Nov 26 05:15 HITS.pool.root.1
[2025-11-26 11:04:48] -rw-------. 1 boincer umatlas  10373120 Nov 26 05:18 result.tar.gz
11:04:50 (726981): run_atlas exited; CPU time 236529.642687
11:04:50 (726981): called boinc_finish(0)

</stderr_txt>
]]>

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