Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:16 (14488): wrapper (7.7.26015): starting
23:52:16 (14488): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 23:52:16] Arguments: --nthreads 8
[2025-11-27 23:52:16] Threads: 8
[2025-11-27 23:52:16] Checking for CVMFS
[2025-11-27 23:52:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:52:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:52:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:52:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:52:18] 2.11.2.0 11529 224595 140696 153387 3 85 23982444 25165824 1294 130560 9 93268502 99.894 40961159 2478 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 23:52:18] CVMFS is ok
[2025-11-27 23:52:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:52:18] Checking for apptainer binary...
[2025-11-27 23:52:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:52:18] Running /usr/bin/apptainer --version
[2025-11-27 23:52:18] apptainer version 1.3.2-1.el7
[2025-11-27 23:52:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:52:22] cg-vwn354.simple-grid.lan
[2025-11-27 23:52:22] apptainer works
[2025-11-27 23:52:22] Set ATHENA_PROC_NUMBER=8
[2025-11-27 23:52:22] Set ATHENA_CORE_NUMBER=8
[2025-11-27 23:52:22] Starting ATLAS job with PandaID=6895882304
[2025-11-27 23:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 23:31:54]  *** The last 200 lines of the pilot log: ***
[2025-11-28 23:31:54] 2025-11-28 22:31:05,123 | INFO     | monitor loop #5728: job 0:6895882304 is in state 'finished'
[2025-11-28 23:31:54] 2025-11-28 22:31:05,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:31:54] 2025-11-28 22:31:06,601 | INFO     | time since job start (84907s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:07,628 | INFO     | monitor loop #5729: job 0:6895882304 is in state 'finished'
[2025-11-28 23:31:54] 2025-11-28 22:31:07,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:31:54] 2025-11-28 22:31:08,611 | INFO     | time since job start (84909s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:10,133 | INFO     | monitor loop #5730: job 0:6895882304 is in state 'finished'
[2025-11-28 23:31:54] 2025-11-28 22:31:10,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:31:54] 2025-11-28 22:31:10,629 | INFO     | time since job start (84911s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:12,636 | INFO     | time since job start (84913s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:12,639 | INFO     | monitor loop #5731: job 0:6895882304 is in state 'finished'
[2025-11-28 23:31:54] 2025-11-28 22:31:12,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:31:54] 2025-11-28 22:31:14,645 | INFO     | time since job start (84915s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:15,144 | INFO     | monitor loop #5732: job 0:6895882304 is in state 'finished'
[2025-11-28 23:31:54] 2025-11-28 22:31:15,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:31:54] 2025-11-28 22:31:16,657 | INFO     | time since job start (84917s) is within the limit (172800.0s)
[2025-11-28 23:31:54] 2025-11-28 22:31:16,960 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 23:31:54] 2025-11-28 22:31:16,961 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 23:31:54] 2025-11-28 22:31:16,963 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6895882304/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 23:31:54] 2025-11-28 22:31:16,963 | INFO     | extracted standard info from prmon json
[2025-11-28 23:31:54] 2025-11-28 22:31:16,963 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 23:31:54] 2025-11-28 22:31:16,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 23:31:54] 2025-11-28 22:31:16,995 | INFO     | fitting pss+swap vs Time
[2025-11-28 23:31:54] 2025-11-28 22:31:16,997 | INFO     | sum of square deviations: 820246688227.5662
[2025-11-28 23:31:54] 2025-11-28 22:31:17,067 | INFO     | sum of deviations: 3174945894814.2305
[2025-11-28 23:31:54] 2025-11-28 22:31:17,068 | INFO     | mean x: 1764326822.0780911
[2025-11-28 23:31:54] 2025-11-28 22:31:17,068 | INFO     | mean y: 2844553.9515545913
[2025-11-28 23:31:54] 2025-11-28 22:31:17,068 | INFO     | intersect: -6826371925.997676
[2025-11-28 23:31:54] 2025-11-28 22:31:17,070 | INFO     | chi2: 23.33874529683928
[2025-11-28 23:31:54] 2025-11-28 22:31:17,072 | INFO     | sum of square deviations: 811382874449.2332
[2025-11-28 23:31:54] 2025-11-28 22:31:17,213 | INFO     | sum of deviations: 3630906213203.622
[2025-11-28 23:31:54] 2025-11-28 22:31:17,213 | INFO     | mean x: 1764326669.5820029
[2025-11-28 23:31:54] 2025-11-28 22:31:17,214 | INFO     | mean y: 2852397.428156749
[2025-11-28 23:31:54] 2025-11-28 22:31:17,214 | INFO     | intersect: -7892439539.87655
[2025-11-28 23:31:54] 2025-11-28 22:31:17,224 | INFO     | chi2: 20.151447951383577
[2025-11-28 23:31:54] 2025-11-28 22:31:17,224 | INFO     | current chi2=20.151447951383577 (change=13.656678218633086 %)
[2025-11-28 23:31:54] 2025-11-28 22:31:17,224 | INFO     | right removable region: 1377
[2025-11-28 23:31:54] 2025-11-28 22:31:17,226 | INFO     | sum of square deviations: 811381964939.2345
[2025-11-28 23:31:54] 2025-11-28 22:31:17,313 | INFO     | sum of deviations: 2598981586824.5996
[2025-11-28 23:31:54] 2025-11-28 22:31:17,314 | INFO     | mean x: 1764326974.5820029
[2025-11-28 23:31:54] 2025-11-28 22:31:17,314 | INFO     | mean y: 2854461.7423802614
[2025-11-28 23:31:54] 2025-11-28 22:31:17,314 | INFO     | intersect: -5648556979.748053
[2025-11-28 23:31:54] 2025-11-28 22:31:17,316 | INFO     | chi2: 18.69795466962747
[2025-11-28 23:31:54] 2025-11-28 22:31:17,316 | INFO     | current chi2=18.69795466962747 (change=19.88449065357555 %)
[2025-11-28 23:31:54] 2025-11-28 22:31:17,316 | INFO     | left removable region: 10
[2025-11-28 23:31:54] 2025-11-28 22:31:17,318 | INFO     | sum of square deviations: 792105949340.7529
[2025-11-28 23:31:54] 2025-11-28 22:31:17,387 | INFO     | sum of deviations: 2658427911724.5
[2025-11-28 23:31:54] 2025-11-28 22:31:17,388 | INFO     | mean x: 1764326944.0907097
[2025-11-28 23:31:54] 2025-11-28 22:31:17,388 | INFO     | mean y: 2872780.1572787124
[2025-11-28 23:31:54] 2025-11-28 22:31:17,388 | INFO     | intersect: -5918476500.809448
[2025-11-28 23:31:54] 2025-11-28 22:31:17,389 | INFO     | chi2: 11.367703282605678
[2025-11-28 23:31:54] 2025-11-28 22:31:17,390 | INFO     | current memory leak: 3.36 B/s (using 1367 data points, chi2=11.37)
[2025-11-28 23:31:54] 2025-11-28 22:31:17,391 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 23:31:54] 2025-11-28 22:31:17,391 | INFO     | ..............................
[2025-11-28 23:31:54] 2025-11-28 22:31:17,391 | INFO     | . Timing measurements:
[2025-11-28 23:31:54] 2025-11-28 22:31:17,391 | INFO     | . get job = 0 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,391 | INFO     | . initial setup = 8 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | . payload setup = 162 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | . stage-in = 0 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | . payload execution = 84465 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | . stage-out = 5 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | . log creation = 2 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,392 | INFO     | ..............................
[2025-11-28 23:31:54] 2025-11-28 22:31:17,742 | INFO     | 
[2025-11-28 23:31:54] 2025-11-28 22:31:17,742 | INFO     | job summary report
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | --------------------------------------------------
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | PanDA job id: 6895882304
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | task id: 47556149
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | errors: (none)
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | pilot state: finished 
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | transexitcode: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | exeerrorcode: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | exeerrordiag: 
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | exitcode: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | exitmsg: OK
[2025-11-28 23:31:54] 2025-11-28 22:31:17,743 | INFO     | cpuconsumptiontime: 319774 s
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | nevents: 1000
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | neventsw: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | pid: 24824
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | pgrp: 24824
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | corecount: 8
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | event service: False
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | sizes: {0: 2283436, 1: 2284121, 2: 2284320, 13: 2284320, 23: 2284376, 34: 2284404, 45: 2284560, 56: 2284588, 66: 2284616, 77: 2284644, 88: 2284700, 98: 2285270, 99
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | --------------------------------------------------
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | 
[2025-11-28 23:31:54] 2025-11-28 22:31:17,744 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 23:31:54] 2025-11-28 22:31:18,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 23:31:54] 2025-11-28 22:31:18,065 | INFO     | job 6895882304 has completed (purged errors)
[2025-11-28 23:31:54] 2025-11-28 22:31:18,065 | INFO     | overall cleanup function is called
[2025-11-28 23:31:54] 2025-11-28 22:31:19,086 | INFO     | --- collectZombieJob: --- 10, [24824]
[2025-11-28 23:31:54] 2025-11-28 22:31:19,087 | INFO     | zombie collector waiting for pid 24824
[2025-11-28 23:31:54] 2025-11-28 22:31:19,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 23:31:54] 2025-11-28 22:31:19,087 | INFO     | collected zombie processes
[2025-11-28 23:31:54] 2025-11-28 22:31:19,087 | INFO     | will attempt to kill all subprocesses of pid=24824
[2025-11-28 23:31:54] 2025-11-28 22:31:19,177 | INFO     | process IDs to be killed: [24824] (in reverse order)
[2025-11-28 23:31:54] 2025-11-28 22:31:19,841 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 23:31:54] 2025-11-28 22:31:19,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 23:31:54] 2025-11-28 22:31:19,844 | INFO     | did not find any defunct processes belonging to 24824
[2025-11-28 23:31:54] 2025-11-28 22:31:19,850 | INFO     | did not find any defunct processes belonging to 24824
[2025-11-28 23:31:54] 2025-11-28 22:31:19,906 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 23:31:54] 2025-11-28 22:31:19,907 | INFO     | ready for new job
[2025-11-28 23:31:54] 2025-11-28 22:31:19,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 23:31:54] 2025-11-28 22:31:19,912 | INFO     | ***************************************
[2025-11-28 23:31:54] 2025-11-28 22:31:19,912 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 23:31:54] 2025-11-28 22:31:19,912 | INFO     | ***************************************
[2025-11-28 23:31:54] 2025-11-28 22:31:19,912 | INFO     | 
[2025-11-28 23:31:54] 2025-11-28 22:31:19,913 | INFO     | pilot is running in a VM
[2025-11-28 23:31:54] 2025-11-28 22:31:19,913 | INFO     | architecture information:
[2025-11-28 23:31:54] 2025-11-28 22:31:19,917 | INFO     | executing command: cat /etc/os-release
[2025-11-28 23:31:54] 2025-11-28 22:31:20,050 | INFO     | cat /etc/os-release:
[2025-11-28 23:31:54] NAME="CentOS Linux"
[2025-11-28 23:31:54] VERSION="7 (Core)"
[2025-11-28 23:31:54] ID="centos"
[2025-11-28 23:31:54] ID_LIKE="rhel fedora"
[2025-11-28 23:31:54] VERSION_ID="7"
[2025-11-28 23:31:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 23:31:54] ANSI_COLOR="0;31"
[2025-11-28 23:31:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 23:31:54] HOME_URL="https://www.centos.org/"
[2025-11-28 23:31:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 23:31:54] 
[2025-11-28 23:31:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 23:31:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 23:31:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 23:31:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 23:31:54] 
[2025-11-28 23:31:54] 2025-11-28 22:31:20,050 | INFO     | ***************************************
[2025-11-28 23:31:54] 2025-11-28 22:31:20,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-28 23:31:54] 2025-11-28 22:31:20,727 | INFO     | sufficient remaining disk space (495375613952 B)
[2025-11-28 23:31:54] 2025-11-28 22:31:20,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 23:31:54] 2025-11-28 22:31:20,728 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 23:31:54] 2025-11-28 22:31:20,728 | INFO     | update_server=False
[2025-11-28 23:31:54] 2025-11-28 22:31:20,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 23:31:54] 2025-11-28 22:31:20,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 23:31:54] 2025-11-28 22:31:21,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:31:54] 2025-11-28 22:31:21,221 | INFO     | aborting loop
[2025-11-28 23:31:54] 2025-11-28 22:31:21,264 | INFO     | all payload control threads have been joined
[2025-11-28 23:31:54] 2025-11-28 22:31:21,611 | INFO     | all job control threads have been joined
[2025-11-28 23:31:54] 2025-11-28 22:31:21,733 | INFO     | [job] retrieve thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:21,804 | INFO     | all data control threads have been joined
[2025-11-28 23:31:54] 2025-11-28 22:31:22,141 | INFO     | [data] copytool_in thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,171 | INFO     | [payload] validate_post thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,197 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,208 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,226 | INFO     | [job] job monitor thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,270 | INFO     | [payload] control thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,456 | INFO     | [payload] failed_post thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 23:31:54] 2025-11-28 22:31:22,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:31:54] 2025-11-28 22:31:22,617 | INFO     | [job] control thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,735 | INFO     | [data] copytool_out thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,764 | INFO     | [job] validate thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:22,810 | INFO     | [data] control thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:23,011 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:23,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:23,567 | INFO     | [job] queue monitor thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:26,471 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 23:31:54] 2025-11-28 22:31:26,560 | INFO     | [monitor] cgroup control has ended
[2025-11-28 23:31:54] 2025-11-28 22:31:28,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686020699968)>', '<ExcThread(monitor, started 140685202155264)>']
[2025-11-28 23:31:54] 2025-11-28 22:31:33,691 | INFO     | all workflow threads have been joined
[2025-11-28 23:31:54] 2025-11-28 22:31:33,692 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 23:31:54] 2025-11-28 22:31:33,692 | INFO     | traces error code: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:33,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 23:31:54] 2025-11-28 22:31:49,839 | INFO     | PID=18281 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 23:31:54] 2025-11-28 22:31:49,839 | INFO     | .. there are 9 such processes running
[2025-11-28 23:31:54] 2025-11-28 22:31:49,840 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 23:31:54] 2025-11-28 22:31:49,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 23:31:54] 2025-11-28 22:31:49,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 23:31:54] 2025-11-28 22:31:49,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 23:31:54] 2025-11-28 22:31:49,840 | INFO     | [monitor] control thread has ended
[2025-11-28 23:31:54] 2025-11-28 22:31:50,150 [wrapper] ==== pilot stdout END ====
[2025-11-28 23:31:54] 2025-11-28 22:31:50,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 23:31:54] 2025-11-28 22:31:50,342 [wrapper] pilotpid: 18281
[2025-11-28 23:31:54] 2025-11-28 22:31:50,432 [wrapper] Pilot exit status: 0
[2025-11-28 23:31:54] 2025-11-28 22:31:50,795 [wrapper] pandaids: 6895882304
[2025-11-28 23:31:54] 2025-11-28 22:31:51,889 [wrapper] cleanup supervisor_pilot 30323 18282
[2025-11-28 23:31:54] 2025-11-28 22:31:51,927 [wrapper] Test setup, not cleaning
[2025-11-28 23:31:54] 2025-11-28 22:31:51,981 [wrapper] apfmon messages muted
[2025-11-28 23:31:54] 2025-11-28 22:31:52,053 [wrapper] ==== wrapper stdout END ====
[2025-11-28 23:31:54] 2025-11-28 22:31:52,123 [wrapper] ==== wrapper stderr END ====
[2025-11-28 23:31:54]  *** Error codes and diagnostics ***
[2025-11-28 23:31:54]     "exeErrorCode": 0,
[2025-11-28 23:31:54]     "exeErrorDiag": "",
[2025-11-28 23:31:54]     "pilotErrorCode": 0,
[2025-11-28 23:31:54]     "pilotErrorDiag": "",
[2025-11-28 23:31:54]  *** Listing of results directory ***
[2025-11-28 23:31:54] total 1338168
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc    576529 Nov 24 17:06 pilot3.tar.gz
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc      5112 Nov 24 17:27 queuedata.json
[2025-11-28 23:31:54] -rwx------. 1 boinc boinc     36292 Nov 24 17:28 runpilot2-wrapper.sh
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc       100 Nov 27 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 23:31:54] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 23:52 run_atlas
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc       105 Nov 27 23:52 job.xml
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc      6393 Nov 27 23:52 init_data.xml
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc 409301005 Nov 27 23:52 EVNT.47483658._001383.pool.root.1
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc     15847 Nov 27 23:52 start_atlas.sh
[2025-11-28 23:31:54] drwxrwx--x. 2 boinc boinc        68 Nov 27 23:52 shared
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc    590104 Nov 27 23:52 input.tar.gz
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc         0 Nov 27 23:52 boinc_lockfile
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc      2785 Nov 27 23:52 pandaJob.out
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc    991532 Nov 27 23:55 agis_schedconf.cvmfs.json
[2025-11-28 23:31:54] drwx------. 5 boinc boinc      4096 Nov 27 23:55 pilot3
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc       533 Nov 28 23:09 boinc_task_state.xml
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc 929432303 Nov 28 23:28 HITS.47556149._003700.pool.root.1
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc      1031 Nov 28 23:29 memory_monitor_summary.json
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc   1516240 Nov 28 23:29 agis_ddmendpoints.agis.ALL.json
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc   2472850 Nov 28 23:29 log.47556149._003700.job.log.tgz.1
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc      7942 Nov 28 23:31 heartbeat.json
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc      8192 Nov 28 23:31 boinc_mmap_file
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc        29 Nov 28 23:31 wrapper_checkpoint.txt
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc       820 Nov 28 23:31 pilotlog.txt
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc        95 Nov 28 23:31 pilot_heartbeat.json
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc  11354164 Nov 28 23:31 log.47556149._003700.job.log.1
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc       353 Nov 28 23:31 output.list
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc       620 Nov 28 23:31 runtime_log
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc  13844480 Nov 28 23:31 result.tar.gz
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc      8817 Nov 28 23:31 runtime_log.err
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc       662 Nov 28 23:31 HvHLDmCboh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ7IKDmdJKbKo.diag
[2025-11-28 23:31:54] -rw-r--r--. 1 boinc boinc     21438 Nov 28 23:31 stderr.txt
[2025-11-28 23:31:54] HITS file was successfully produced:
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc 929432303 Nov 28 23:28 shared/HITS.pool.root.1
[2025-11-28 23:31:54]  *** Contents of shared directory: ***
[2025-11-28 23:31:54] total 1321480
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc 409301005 Nov 27 23:52 ATLAS.root_0
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc     15847 Nov 27 23:52 start_atlas.sh
[2025-11-28 23:31:54] -rw-r--r--. 2 boinc boinc    590104 Nov 27 23:52 input.tar.gz
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc 929432303 Nov 28 23:28 HITS.pool.root.1
[2025-11-28 23:31:54] -rw-------. 1 boinc boinc  13844480 Nov 28 23:31 result.tar.gz
23:31:55 (14488): run_atlas exited; CPU time 320329.277402
23:31:55 (14488): called boinc_finish(0)

</stderr_txt>
]]>

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