Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:07:27 (6196): wrapper (7.7.26015): starting
09:07:27 (6196): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 09:07:27] Arguments: --nthreads 8
[2025-11-25 09:07:27] Threads: 8
[2025-11-25 09:07:27] Checking for CVMFS
[2025-11-25 09:07:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:07:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:07:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:07:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:07:28] 2.11.2.0 2913 71960 85660 153284 3 82 16153114 20275201 1 130560 0 21828445 99.906 3495445 30821 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 09:07:28] CVMFS is ok
[2025-11-25 09:07:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:07:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:07:28] Further information can be found at the LHC@home message board.
[2025-11-25 09:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:07:28] Checking for apptainer binary...
[2025-11-25 09:07:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:07:28] Running /usr/bin/apptainer --version
[2025-11-25 09:07:28] apptainer version 1.3.2-1.el7
[2025-11-25 09:07:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:07:30] c-115-15.aglt2.org
[2025-11-25 09:07:30] apptainer works
[2025-11-25 09:07:30] Set ATHENA_PROC_NUMBER=8
[2025-11-25 09:07:30] Set ATHENA_CORE_NUMBER=8
[2025-11-25 09:07:30] Starting ATLAS job with PandaID=6895881934
[2025-11-25 09:07:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:28:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:28:59] 2025-11-26 01:28:17,420 | INFO     | time since job start (40830s) is within the limit (172800.0s)
[2025-11-25 20:28:59] 2025-11-26 01:28:18,939 | INFO     | monitor loop #3013: job 0:6895881934 is in state 'finished'
[2025-11-25 20:28:59] 2025-11-26 01:28:18,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,421 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 20:28:59] 2025-11-26 01:28:19,424 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-25 20:28:59] 2025-11-26 01:28:19,425 | INFO     | time since job start (40832s) is within the limit (172800.0s)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,427 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895881934/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,427 | INFO     | extracted standard info from prmon json
[2025-11-25 20:28:59] 2025-11-26 01:28:19,427 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:28:59] 2025-11-26 01:28:19,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:28:59] 2025-11-26 01:28:19,437 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:28:59] 2025-11-26 01:28:19,438 | INFO     | sum of square deviations: 92845161797.2408
[2025-11-25 20:28:59] 2025-11-26 01:28:19,447 | INFO     | sum of deviations: 735230354727.3657
[2025-11-25 20:28:59] 2025-11-26 01:28:19,447 | INFO     | mean x: 1764100072.496263
[2025-11-25 20:28:59] 2025-11-26 01:28:19,447 | INFO     | mean y: 2922890.745889387
[2025-11-25 20:28:59] 2025-11-26 01:28:19,447 | INFO     | intersect: -13966786429.25601
[2025-11-25 20:28:59] 2025-11-26 01:28:19,448 | INFO     | chi2: 5.909484874922258
[2025-11-25 20:28:59] 2025-11-26 01:28:19,448 | INFO     | sum of square deviations: 90779066176.0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,456 | INFO     | sum of deviations: 945677574319.9991
[2025-11-25 20:28:59] 2025-11-26 01:28:19,457 | INFO     | mean x: 1764099920.0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,457 | INFO     | mean y: 2938417.9006024096
[2025-11-25 20:28:59] 2025-11-26 01:28:19,457 | INFO     | intersect: -18374313116.823364
[2025-11-25 20:28:59] 2025-11-26 01:28:19,458 | INFO     | chi2: 3.1078504172621026
[2025-11-25 20:28:59] 2025-11-26 01:28:19,458 | INFO     | current chi2=3.1078504172621026 (change=47.40911461757506 %)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,458 | INFO     | sum of square deviations: 88743854854.7409
[2025-11-25 20:28:59] 2025-11-26 01:28:19,466 | INFO     | sum of deviations: 1026434102945.4546
[2025-11-25 20:28:59] 2025-11-26 01:28:19,467 | INFO     | mean x: 1764099767.5037937
[2025-11-25 20:28:59] 2025-11-26 01:28:19,467 | INFO     | mean y: 2944456.817905918
[2025-11-25 20:28:59] 2025-11-26 01:28:19,467 | INFO     | intersect: -20401084253.99156
[2025-11-25 20:28:59] 2025-11-26 01:28:19,467 | INFO     | chi2: 2.5155623722088944
[2025-11-25 20:28:59] 2025-11-26 01:28:19,468 | INFO     | current chi2=2.5155623722088944 (change=19.057804126074746 %)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,468 | INFO     | right removable region: 658
[2025-11-25 20:28:59] 2025-11-26 01:28:19,468 | INFO     | sum of square deviations: 90778863656.0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,477 | INFO     | sum of deviations: 549565294043.0002
[2025-11-25 20:28:59] 2025-11-26 01:28:19,477 | INFO     | mean x: 1764100225.0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,477 | INFO     | mean y: 2936567.0406626505
[2025-11-25 20:28:59] 2025-11-26 01:28:19,477 | INFO     | intersect: -10676732904.778835
[2025-11-25 20:28:59] 2025-11-26 01:28:19,478 | INFO     | chi2: 3.6291378167290635
[2025-11-25 20:28:59] 2025-11-26 01:28:19,478 | INFO     | current chi2=3.6291378167290635 (change=38.58791597674059 %)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,478 | INFO     | sum of square deviations: 88743449814.74097
[2025-11-25 20:28:59] 2025-11-26 01:28:19,486 | INFO     | sum of deviations: 503411512116.5935
[2025-11-25 20:28:59] 2025-11-26 01:28:19,487 | INFO     | mean x: 1764100377.5037937
[2025-11-25 20:28:59] 2025-11-26 01:28:19,487 | INFO     | mean y: 2940025.362670713
[2025-11-25 20:28:59] 2025-11-26 01:28:19,487 | INFO     | intersect: -10004203492.48064
[2025-11-25 20:28:59] 2025-11-26 01:28:19,488 | INFO     | chi2: 3.5674582137658724
[2025-11-25 20:28:59] 2025-11-26 01:28:19,488 | INFO     | current chi2=3.5674582137658724 (change=1.6995662903422866 %)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,488 | INFO     | left removable region: 20
[2025-11-25 20:28:59] 2025-11-26 01:28:19,488 | INFO     | sum of square deviations: 80527244122.80997
[2025-11-25 20:28:59] 2025-11-26 01:28:19,496 | INFO     | sum of deviations: 723009374305.0001
[2025-11-25 20:28:59] 2025-11-26 01:28:19,496 | INFO     | mean x: 1764100347.0172415
[2025-11-25 20:28:59] 2025-11-26 01:28:19,496 | INFO     | mean y: 2967972.0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,496 | INFO     | intersect: -15835908696.410477
[2025-11-25 20:28:59] 2025-11-26 01:28:19,497 | INFO     | chi2: 0.09963470180620441
[2025-11-25 20:28:59] 2025-11-26 01:28:19,497 | INFO     | current memory leak: 8.98 B/s (using 638 data points, chi2=0.10)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | could have reported an average CPU frequency of 2380 MHz (26 samples)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | ..............................
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . Timing measurements:
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . get job = 0 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . initial setup = 2 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . payload setup = 8 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . stage-in = 0 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,498 | INFO     | . payload execution = 40788 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,499 | INFO     | . stage-out = 3 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,499 | INFO     | . log creation = 0 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,499 | INFO     | ..............................
[2025-11-25 20:28:59] 2025-11-26 01:28:19,835 | INFO     | 
[2025-11-25 20:28:59] 2025-11-26 01:28:19,835 | INFO     | job summary report
[2025-11-25 20:28:59] 2025-11-26 01:28:19,835 | INFO     | --------------------------------------------------
[2025-11-25 20:28:59] 2025-11-26 01:28:19,836 | INFO     | PanDA job id: 6895881934
[2025-11-25 20:28:59] 2025-11-26 01:28:19,836 | INFO     | task id: 47556149
[2025-11-25 20:28:59] 2025-11-26 01:28:19,836 | INFO     | errors: (none)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:28:59] 2025-11-26 01:28:19,836 | INFO     | pilot state: finished 
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | transexitcode: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | exeerrorcode: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | exeerrordiag: 
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | exitcode: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | exitmsg: OK
[2025-11-25 20:28:59] 2025-11-26 01:28:19,837 | INFO     | cpuconsumptiontime: 315984 s
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | nevents: 1000
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | neventsw: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | pid: 16388
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | pgrp: 16388
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | corecount: 8
[2025-11-25 20:28:59] 2025-11-26 01:28:19,838 | INFO     | event service: False
[2025-11-25 20:28:59] 2025-11-26 01:28:19,839 | INFO     | sizes: {0: 2284087, 1: 2284342, 7: 2284604, 12: 2284632, 40800: 2328534, 40804: 2337528, 40808: 2337712, 40816: 2337958}
[2025-11-25 20:28:59] 2025-11-26 01:28:19,839 | INFO     | --------------------------------------------------
[2025-11-25 20:28:59] 2025-11-26 01:28:19,839 | INFO     | 
[2025-11-25 20:28:59] 2025-11-26 01:28:19,839 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:28:59] 2025-11-26 01:28:19,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:28:59] 2025-11-26 01:28:19,874 | INFO     | job 6895881934 has completed (purged errors)
[2025-11-25 20:28:59] 2025-11-26 01:28:19,874 | INFO     | overall cleanup function is called
[2025-11-25 20:28:59] 2025-11-26 01:28:20,889 | INFO     | --- collectZombieJob: --- 10, [16388]
[2025-11-25 20:28:59] 2025-11-26 01:28:20,889 | INFO     | zombie collector waiting for pid 16388
[2025-11-25 20:28:59] 2025-11-26 01:28:20,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:28:59] 2025-11-26 01:28:20,890 | INFO     | collected zombie processes
[2025-11-25 20:28:59] 2025-11-26 01:28:20,890 | INFO     | will attempt to kill all subprocesses of pid=16388
[2025-11-25 20:28:59] 2025-11-26 01:28:20,975 | INFO     | process IDs to be killed: [16388] (in reverse order)
[2025-11-25 20:28:59] 2025-11-26 01:28:21,029 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:28:59] 2025-11-26 01:28:21,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:28:59] 2025-11-26 01:28:21,034 | INFO     | did not find any defunct processes belonging to 16388
[2025-11-25 20:28:59] 2025-11-26 01:28:21,038 | INFO     | did not find any defunct processes belonging to 16388
[2025-11-25 20:28:59] 2025-11-26 01:28:21,041 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:28:59] 2025-11-26 01:28:21,041 | INFO     | ready for new job
[2025-11-25 20:28:59] 2025-11-26 01:28:21,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:28:59] 2025-11-26 01:28:21,044 | INFO     | ***************************************
[2025-11-25 20:28:59] 2025-11-26 01:28:21,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:28:59] 2025-11-26 01:28:21,044 | INFO     | ***************************************
[2025-11-25 20:28:59] 2025-11-26 01:28:21,044 | INFO     | 
[2025-11-25 20:28:59] 2025-11-26 01:28:21,045 | INFO     | architecture information:
[2025-11-25 20:28:59] 2025-11-26 01:28:21,045 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:28:59] 2025-11-26 01:28:21,063 | INFO     | cat /etc/os-release:
[2025-11-25 20:28:59] NAME="CentOS Linux"
[2025-11-25 20:28:59] VERSION="7 (Core)"
[2025-11-25 20:28:59] ID="centos"
[2025-11-25 20:28:59] ID_LIKE="rhel fedora"
[2025-11-25 20:28:59] VERSION_ID="7"
[2025-11-25 20:28:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:28:59] ANSI_COLOR="0;31"
[2025-11-25 20:28:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:28:59] HOME_URL="https://www.centos.org/"
[2025-11-25 20:28:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:28:59] 
[2025-11-25 20:28:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:28:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:28:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:28:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:28:59] 
[2025-11-25 20:28:59] 2025-11-26 01:28:21,064 | INFO     | ***************************************
[2025-11-25 20:28:59] 2025-11-26 01:28:21,565 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:28:59] 2025-11-26 01:28:21,585 | INFO     | sufficient remaining disk space (17466130432 B)
[2025-11-25 20:28:59] 2025-11-26 01:28:21,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:28:59] 2025-11-26 01:28:21,586 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:28:59] 2025-11-26 01:28:21,586 | INFO     | update_server=False
[2025-11-25 20:28:59] 2025-11-26 01:28:21,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:28:59] 2025-11-26 01:28:21,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:28:59] 2025-11-26 01:28:21,895 | INFO     | all data control threads have been joined
[2025-11-25 20:28:59] 2025-11-26 01:28:21,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:28:59] 2025-11-26 01:28:22,392 | INFO     | all payload control threads have been joined
[2025-11-25 20:28:59] 2025-11-26 01:28:22,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:28:59] 2025-11-26 01:28:22,448 | INFO     | aborting loop
[2025-11-25 20:28:59] 2025-11-26 01:28:22,592 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:22,709 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:22,775 | INFO     | all job control threads have been joined
[2025-11-25 20:28:59] 2025-11-26 01:28:22,896 | INFO     | [data] control thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,031 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,336 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,393 | INFO     | [payload] control thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,454 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,593 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,729 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,743 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,755 | INFO     | [job] validate thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,780 | INFO     | [job] control thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:23,926 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:24,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:28:59] 2025-11-26 01:28:25,594 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:25,996 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:28:59] 2025-11-26 01:28:52,625 | INFO     | PID=9880 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 20:28:59] 2025-11-26 01:28:52,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:28:59] 2025-11-26 01:28:52,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:28:59] 2025-11-26 01:28:52,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:28:59] 2025-11-26 01:28:54,298 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:28:59] 2025-11-26 01:28:54,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288147666752)>', '<ExcThread(monitor, started 140287095588608)>']
[2025-11-25 20:28:59] 2025-11-26 01:28:54,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:28:59] 2025-11-26 01:28:54,633 | INFO     | [monitor] control thread has ended
[2025-11-25 20:28:59] 2025-11-26 01:28:59,505 | INFO     | all workflow threads have been joined
[2025-11-25 20:28:59] 2025-11-26 01:28:59,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:28:59] 2025-11-26 01:28:59,506 | INFO     | traces error code: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:59,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:28:59] 2025-11-26 01:28:59,604 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:28:59] 2025-11-26 01:28:59,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:28:59] 2025-11-26 01:28:59,613 [wrapper] pilotpid: 9880
[2025-11-25 20:28:59] 2025-11-26 01:28:59,618 [wrapper] Pilot exit status: 0
[2025-11-25 20:28:59] 2025-11-26 01:28:59,636 [wrapper] pandaids: 6895881934
[2025-11-25 20:28:59] 2025-11-26 01:28:59,682 [wrapper] cleanup supervisor_pilot 26491 9881
[2025-11-25 20:28:59] 2025-11-26 01:28:59,687 [wrapper] Test setup, not cleaning
[2025-11-25 20:28:59] 2025-11-26 01:28:59,691 [wrapper] apfmon messages muted
[2025-11-25 20:28:59] 2025-11-26 01:28:59,696 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:28:59] 2025-11-26 01:28:59,701 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:28:59]  *** Error codes and diagnostics ***
[2025-11-25 20:28:59]     "exeErrorCode": 0,
[2025-11-25 20:28:59]     "exeErrorDiag": "",
[2025-11-25 20:28:59]     "pilotErrorCode": 0,
[2025-11-25 20:28:59]     "pilotErrorDiag": "",
[2025-11-25 20:28:59]  *** Listing of results directory ***
[2025-11-25 20:28:59] total 1313744
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 11:11 queuedata.json
[2025-11-25 20:28:59] -rwx------ 1 boincer umatlas     36292 Nov 24 11:13 runpilot2-wrapper.sh
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas       100 Nov 25 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:28:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 09:07 run_atlas
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas       105 Nov 25 09:07 job.xml
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas 410892199 Nov 25 09:07 EVNT.47483658._001378.pool.root.1
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 09:07 start_atlas.sh
[2025-11-25 20:28:59] drwxrwx--x 2 boincer umatlas      4096 Nov 25 09:07 shared
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 09:07 input.tar.gz
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas         0 Nov 25 09:07 boinc_lockfile
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 09:07 pandaJob.out
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas        57 Nov 25 09:07 setup.sh.local
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas    991909 Nov 25 09:07 agis_schedconf.cvmfs.json
[2025-11-25 20:28:59] drwx------ 5 boincer umatlas      4096 Nov 25 09:07 pilot3
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas       533 Nov 25 20:16 boinc_task_state.xml
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 20:19 init_data.xml
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas 915302980 Nov 25 20:27 HITS.47556149._003650.pool.root.1
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas      1064 Nov 25 20:28 memory_monitor_summary.json
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas   1516240 Nov 25 20:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas   1932975 Nov 25 20:28 log.47556149._003650.job.log.tgz.1
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas        95 Nov 25 20:28 pilot_heartbeat.json
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas      8660 Nov 25 20:28 heartbeat.json
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:28 boinc_mmap_file
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:28 wrapper_checkpoint.txt
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas      4745 Nov 25 20:28 pilotlog.txt
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas   5644327 Nov 25 20:28 log.47556149._003650.job.log.1
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas       353 Nov 25 20:28 output.list
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:28 runtime_log
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas   7598080 Nov 25 20:28 result.tar.gz
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas       668 Nov 25 20:28 SOMLDmgMoh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm56IKDmXgGVVn.diag
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 20:28 runtime_log.err
[2025-11-25 20:28:59] -rw-r--r-- 1 boincer umatlas     21279 Nov 25 20:28 stderr.txt
[2025-11-25 20:28:59] HITS file was successfully produced:
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas 915302980 Nov 25 20:27 shared/HITS.pool.root.1
[2025-11-25 20:28:59]  *** Contents of shared directory: ***
[2025-11-25 20:28:59] total 1303140
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas 410892199 Nov 25 09:07 ATLAS.root_0
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 09:07 start_atlas.sh
[2025-11-25 20:28:59] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 09:07 input.tar.gz
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas 915302980 Nov 25 20:27 HITS.pool.root.1
[2025-11-25 20:28:59] -rw------- 1 boincer umatlas   7598080 Nov 25 20:28 result.tar.gz
20:29:01 (6196): run_atlas exited; CPU time 312862.774885
20:29:01 (6196): called boinc_finish(0)

</stderr_txt>
]]>

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