Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:24 (25907): wrapper (7.7.26015): starting
08:56:24 (25907): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:56:24] Arguments: --nthreads 8
[2025-11-25 08:56:24] Threads: 8
[2025-11-25 08:56:24] Checking for CVMFS
[2025-11-25 08:56:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:56:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:56:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:56:25] 2.11.2.0 5808 169020 108964 153284 0 82 16846430 18432001 2827 130560 0 111958652 99.944 8964764 6944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 08:56:25] CVMFS is ok
[2025-11-25 08:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:56:25] Further information can be found at the LHC@home message board.
[2025-11-25 08:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:56:25] Checking for apptainer binary...
[2025-11-25 08:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:56:25] Running /usr/bin/apptainer --version
[2025-11-25 08:56:25] apptainer version 1.3.2-1.el7
[2025-11-25 08:56:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:56:25] c-9-34.aglt2.org
[2025-11-25 08:56:25] apptainer works
[2025-11-25 08:56:25] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:56:25] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:56:25] Starting ATLAS job with PandaID=6895384333
[2025-11-25 08:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:41:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:41:30] 2025-11-26 07:40:29,203 | INFO     | monitor loop #4417: job 0:6895384333 is in state 'finished'
[2025-11-26 02:41:30] 2025-11-26 07:40:29,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:41:30] 2025-11-26 07:40:29,301 | INFO     | time since job start (63832s) is within the limit (172800.0s)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,090 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:41:30] 2025-11-26 07:40:31,097 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9119375000014
[2025-11-26 02:41:30] 2025-11-26 07:40:31,103 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895384333/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,104 | INFO     | extracted standard info from prmon json
[2025-11-26 02:41:30] 2025-11-26 07:40:31,104 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:41:30] 2025-11-26 07:40:31,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:41:30] 2025-11-26 07:40:31,124 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:41:30] 2025-11-26 07:40:31,124 | INFO     | sum of square deviations: 354874860190.1755
[2025-11-26 02:41:30] 2025-11-26 07:40:31,141 | INFO     | sum of deviations: 1828284419808.454
[2025-11-26 02:41:30] 2025-11-26 07:40:31,141 | INFO     | mean x: 1764110897.1376674
[2025-11-26 02:41:30] 2025-11-26 07:40:31,141 | INFO     | mean y: 2870864.503824092
[2025-11-26 02:41:30] 2025-11-26 07:40:31,141 | INFO     | intersect: -9085675070.597616
[2025-11-26 02:41:30] 2025-11-26 07:40:31,142 | INFO     | chi2: 4.848170105530768
[2025-11-26 02:41:30] 2025-11-26 07:40:31,143 | INFO     | sum of square deviations: 349810345405.6329
[2025-11-26 02:41:30] 2025-11-26 07:40:31,159 | INFO     | sum of deviations: 2105569389216.721
[2025-11-26 02:41:30] 2025-11-26 07:40:31,160 | INFO     | mean x: 1764110744.6407301
[2025-11-26 02:41:30] 2025-11-26 07:40:31,160 | INFO     | mean y: 2879209.0019212295
[2025-11-26 02:41:30] 2025-11-26 07:40:31,160 | INFO     | intersect: -10615610586.65186
[2025-11-26 02:41:30] 2025-11-26 07:40:31,161 | INFO     | chi2: 2.6947929779503057
[2025-11-26 02:41:30] 2025-11-26 07:40:31,161 | INFO     | current chi2=2.6947929779503057 (change=44.416286572203816 %)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,162 | INFO     | sum of square deviations: 344794250133.5707
[2025-11-26 02:41:30] 2025-11-26 07:40:31,181 | INFO     | sum of deviations: 2239839282087.9985
[2025-11-26 02:41:30] 2025-11-26 07:40:31,181 | INFO     | mean x: 1764110592.1438224
[2025-11-26 02:41:30] 2025-11-26 07:40:31,181 | INFO     | mean y: 2883287.288610039
[2025-11-26 02:41:30] 2025-11-26 07:40:31,181 | INFO     | intersect: -11457064785.222866
[2025-11-26 02:41:30] 2025-11-26 07:40:31,183 | INFO     | chi2: 2.0713071701406474
[2025-11-26 02:41:30] 2025-11-26 07:40:31,183 | INFO     | current chi2=2.0713071701406474 (change=23.136686673567393 %)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,183 | INFO     | right removable region: 1035
[2025-11-26 02:41:30] 2025-11-26 07:40:31,184 | INFO     | sum of square deviations: 349810002097.913
[2025-11-26 02:41:30] 2025-11-26 07:40:31,201 | INFO     | sum of deviations: 1589827233177.0034
[2025-11-26 02:41:30] 2025-11-26 07:40:31,201 | INFO     | mean x: 1764111049.6397696
[2025-11-26 02:41:30] 2025-11-26 07:40:31,201 | INFO     | mean y: 2878032.8213256486
[2025-11-26 02:41:30] 2025-11-26 07:40:31,201 | INFO     | intersect: -8014708006.015689
[2025-11-26 02:41:30] 2025-11-26 07:40:31,202 | INFO     | chi2: 3.080802058865218
[2025-11-26 02:41:30] 2025-11-26 07:40:31,202 | INFO     | current chi2=3.080802058865218 (change=36.45433242223382 %)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,203 | INFO     | sum of square deviations: 344793690398.7054
[2025-11-26 02:41:30] 2025-11-26 07:40:31,219 | INFO     | sum of deviations: 1527193929055.2937
[2025-11-26 02:41:30] 2025-11-26 07:40:31,220 | INFO     | mean x: 1764111202.1399615
[2025-11-26 02:41:30] 2025-11-26 07:40:31,220 | INFO     | mean y: 2879936.335907336
[2025-11-26 02:41:30] 2025-11-26 07:40:31,220 | INFO     | intersect: -7810893903.235204
[2025-11-26 02:41:30] 2025-11-26 07:40:31,221 | INFO     | chi2: 3.0420123513573714
[2025-11-26 02:41:30] 2025-11-26 07:40:31,221 | INFO     | current chi2=3.0420123513573714 (change=1.259078212968161 %)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,221 | INFO     | left removable region: 20
[2025-11-26 02:41:30] 2025-11-26 07:40:31,222 | INFO     | sum of square deviations: 324249082297.4348
[2025-11-26 02:41:30] 2025-11-26 07:40:31,237 | INFO     | sum of deviations: 1853507035125.711
[2025-11-26 02:41:30] 2025-11-26 07:40:31,237 | INFO     | mean x: 1764111171.6482759
[2025-11-26 02:41:30] 2025-11-26 07:40:31,237 | INFO     | mean y: 2895684.3773399014
[2025-11-26 02:41:30] 2025-11-26 07:40:31,238 | INFO     | intersect: -10081303919.908812
[2025-11-26 02:41:30] 2025-11-26 07:40:31,238 | INFO     | chi2: 0.21892963247445985
[2025-11-26 02:41:30] 2025-11-26 07:40:31,238 | INFO     | current memory leak: 5.72 B/s (using 1015 data points, chi2=0.22)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,239 | INFO     | could have reported an average CPU frequency of 2999 MHz (38 samples)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,239 | INFO     | ..............................
[2025-11-26 02:41:30] 2025-11-26 07:40:31,239 | INFO     | . Timing measurements:
[2025-11-26 02:41:30] 2025-11-26 07:40:31,239 | INFO     | . get job = 0 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . initial setup = 2 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . payload setup = 5 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . stage-in = 0 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . payload execution = 63799 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . stage-out = 3 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | . log creation = 0 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,240 | INFO     | ..............................
[2025-11-26 02:41:30] 2025-11-26 07:40:31,312 | INFO     | time since job start (63834s) is within the limit (172800.0s)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,312 | INFO     | 
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | job summary report
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | --------------------------------------------------
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | PanDA job id: 6895384333
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | task id: 47556149
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | errors: (none)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,313 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | pilot state: finished 
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | transexitcode: 0
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | exeerrorcode: 0
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | exeerrordiag: 
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | exitcode: 0
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | exitmsg: OK
[2025-11-26 02:41:30] 2025-11-26 07:40:31,314 | INFO     | cpuconsumptiontime: 489569 s
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | nevents: 1000
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | neventsw: 0
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | pid: 40790
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | pgrp: 40790
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | corecount: 8
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | event service: False
[2025-11-26 02:41:30] 2025-11-26 07:40:31,315 | INFO     | sizes: {0: 2284037, 1: 2284292, 5: 2284554, 12: 2284610, 63808: 2337592, 63813: 2346770, 63818: 2346960}
[2025-11-26 02:41:30] 2025-11-26 07:40:31,316 | INFO     | --------------------------------------------------
[2025-11-26 02:41:30] 2025-11-26 07:40:31,316 | INFO     | 
[2025-11-26 02:41:30] 2025-11-26 07:40:31,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 02:41:30] 2025-11-26 07:40:31,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:41:30] 2025-11-26 07:40:31,338 | INFO     | job 6895384333 has completed (purged errors)
[2025-11-26 02:41:30] 2025-11-26 07:40:31,338 | INFO     | overall cleanup function is called
[2025-11-26 02:41:30] 2025-11-26 07:40:32,354 | INFO     | --- collectZombieJob: --- 10, [40790]
[2025-11-26 02:41:30] 2025-11-26 07:40:32,354 | INFO     | zombie collector waiting for pid 40790
[2025-11-26 02:41:30] 2025-11-26 07:40:32,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:41:30] 2025-11-26 07:40:32,355 | INFO     | collected zombie processes
[2025-11-26 02:41:30] 2025-11-26 07:40:32,355 | INFO     | will attempt to kill all subprocesses of pid=40790
[2025-11-26 02:41:30] 2025-11-26 07:40:32,622 | INFO     | process IDs to be killed: [40790] (in reverse order)
[2025-11-26 02:41:30] 2025-11-26 07:40:32,687 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:41:30] 2025-11-26 07:40:32,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:41:30] 2025-11-26 07:40:32,698 | INFO     | did not find any defunct processes belonging to 40790
[2025-11-26 02:41:30] 2025-11-26 07:40:32,708 | INFO     | did not find any defunct processes belonging to 40790
[2025-11-26 02:41:30] 2025-11-26 07:40:32,710 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:41:30] 2025-11-26 07:40:32,710 | INFO     | ready for new job
[2025-11-26 02:41:30] 2025-11-26 07:40:32,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:41:30] 2025-11-26 07:40:32,714 | INFO     | ***************************************
[2025-11-26 02:41:30] 2025-11-26 07:40:32,714 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:41:30] 2025-11-26 07:40:32,714 | INFO     | ***************************************
[2025-11-26 02:41:30] 2025-11-26 07:40:32,714 | INFO     | 
[2025-11-26 02:41:30] 2025-11-26 07:40:32,715 | INFO     | architecture information:
[2025-11-26 02:41:30] 2025-11-26 07:40:32,716 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:41:30] 2025-11-26 07:40:32,726 | INFO     | cat /etc/os-release:
[2025-11-26 02:41:30] NAME="CentOS Linux"
[2025-11-26 02:41:30] VERSION="7 (Core)"
[2025-11-26 02:41:30] ID="centos"
[2025-11-26 02:41:30] ID_LIKE="rhel fedora"
[2025-11-26 02:41:30] VERSION_ID="7"
[2025-11-26 02:41:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:41:30] ANSI_COLOR="0;31"
[2025-11-26 02:41:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:41:30] HOME_URL="https://www.centos.org/"
[2025-11-26 02:41:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:41:30] 
[2025-11-26 02:41:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:41:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:41:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:41:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:41:30] 
[2025-11-26 02:41:30] 2025-11-26 07:40:32,726 | INFO     | ***************************************
[2025-11-26 02:41:30] 2025-11-26 07:40:33,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 02:41:30] 2025-11-26 07:40:33,253 | INFO     | sufficient remaining disk space (100378083328 B)
[2025-11-26 02:41:30] 2025-11-26 07:40:33,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:41:30] 2025-11-26 07:40:33,253 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:41:30] 2025-11-26 07:40:33,254 | INFO     | update_server=False
[2025-11-26 02:41:30] 2025-11-26 07:40:33,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:41:30] 2025-11-26 07:40:33,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:41:30] 2025-11-26 07:40:33,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:41:30] 2025-11-26 07:40:33,254 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 02:41:30] 2025-11-26 07:40:33,255 | INFO     | aborting loop
[2025-11-26 02:41:30] 2025-11-26 07:40:33,255 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:41:30] 2025-11-26 07:40:33,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:41:30] 2025-11-26 07:40:33,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:41:30] 2025-11-26 07:40:33,576 | INFO     | all job control threads have been joined
[2025-11-26 02:41:30] 2025-11-26 07:40:33,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:41:30] 2025-11-26 07:40:33,672 | INFO     | all data control threads have been joined
[2025-11-26 02:41:30] 2025-11-26 07:40:33,977 | INFO     | all payload control threads have been joined
[2025-11-26 02:41:30] 2025-11-26 07:40:34,259 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,260 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,261 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,515 | INFO     | [job] validate thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,545 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,581 | INFO     | [job] control thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,630 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,674 | INFO     | [data] control thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:34,982 | INFO     | [payload] control thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:35,007 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:35,289 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:35,364 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:35,555 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:35,670 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:40:36,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:41:30] 2025-11-26 07:40:40,520 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:41:30] 2025-11-26 07:41:24,084 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:41:30] 2025-11-26 07:41:24,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914317489984)>', '<ExcThread(monitor, started 139913592829696)>']
[2025-11-26 02:41:30] 2025-11-26 07:41:25,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:41:30] 2025-11-26 07:41:25,534 | INFO     | [monitor] control thread has ended
[2025-11-26 02:41:30] 2025-11-26 07:41:29,715 | INFO     | all workflow threads have been joined
[2025-11-26 02:41:30] 2025-11-26 07:41:29,715 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:41:30] 2025-11-26 07:41:29,716 | INFO     | traces error code: 0
[2025-11-26 02:41:30] 2025-11-26 07:41:29,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:41:30] 2025-11-26 07:41:29,829 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:41:30] 2025-11-26 07:41:29,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:41:30] 2025-11-26 07:41:29,833 [wrapper] pilotpid: 29935
[2025-11-26 02:41:30] 2025-11-26 07:41:29,835 [wrapper] Pilot exit status: 0
[2025-11-26 02:41:30] 2025-11-26 07:41:29,842 [wrapper] pandaids: 6895384333
[2025-11-26 02:41:30] 2025-11-26 07:41:29,905 [wrapper] cleanup supervisor_pilot 44493 29937
[2025-11-26 02:41:30] 2025-11-26 07:41:29,908 [wrapper] Test setup, not cleaning
[2025-11-26 02:41:30] 2025-11-26 07:41:29,911 [wrapper] apfmon messages muted
[2025-11-26 02:41:30] 2025-11-26 07:41:29,913 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:41:30] 2025-11-26 07:41:29,915 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:41:30]  *** Error codes and diagnostics ***
[2025-11-26 02:41:30]     "exeErrorCode": 0,
[2025-11-26 02:41:30]     "exeErrorDiag": "",
[2025-11-26 02:41:30]     "pilotErrorCode": 0,
[2025-11-26 02:41:30]     "pilotErrorDiag": "",
[2025-11-26 02:41:30]  *** Listing of results directory ***
[2025-11-26 02:41:30] total 1340988
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 23:52 queuedata.json
[2025-11-26 02:41:30] -rwx------ 1 boincer umatlas     36292 Nov 23 23:54 runpilot2-wrapper.sh
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:41:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:56 run_atlas
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:56 job.xml
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas 411071849 Nov 25 08:56 EVNT.47483658._001224.pool.root.1
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:56 start_atlas.sh
[2025-11-26 02:41:30] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:56 shared
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 08:56 input.tar.gz
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:56 boinc_lockfile
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 08:56 pandaJob.out
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas        57 Nov 25 08:56 setup.sh.local
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas    991909 Nov 25 08:56 agis_schedconf.cvmfs.json
[2025-11-26 02:41:30] drwx------ 5 boincer umatlas      4096 Nov 25 08:56 pilot3
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas       533 Nov 26 02:28 boinc_task_state.xml
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas      6038 Nov 26 02:38 init_data.xml
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas 936325675 Nov 26 02:39 HITS.47556149._002103.pool.root.1
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas        95 Nov 26 02:40 pilot_heartbeat.json
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas      1063 Nov 26 02:40 memory_monitor_summary.json
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas   1516240 Nov 26 02:40 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas   2230422 Nov 26 02:40 log.47556149._002103.job.log.tgz.1
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas      7966 Nov 26 02:40 heartbeat.json
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 02:41 boinc_mmap_file
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas        29 Nov 26 02:41 wrapper_checkpoint.txt
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas      4553 Nov 26 02:41 pilotlog.txt
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas   8693250 Nov 26 02:41 log.47556149._002103.job.log.1
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas       353 Nov 26 02:41 output.list
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas       620 Nov 26 02:41 runtime_log
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas  10946560 Nov 26 02:41 result.tar.gz
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas      9333 Nov 26 02:41 runtime_log.err
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas       666 Nov 26 02:41 jb0MDmyldh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyuIKDmpEUfym.diag
[2025-11-26 02:41:30] -rw-r--r-- 1 boincer umatlas     21240 Nov 26 02:41 stderr.txt
[2025-11-26 02:41:30] HITS file was successfully produced:
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas 936325675 Nov 26 02:39 shared/HITS.pool.root.1
[2025-11-26 02:41:30]  *** Contents of shared directory: ***
[2025-11-26 02:41:30] total 1327120
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas 411071849 Nov 25 08:56 ATLAS.root_0
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:56 start_atlas.sh
[2025-11-26 02:41:30] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 08:56 input.tar.gz
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas 936325675 Nov 26 02:39 HITS.pool.root.1
[2025-11-26 02:41:30] -rw------- 1 boincer umatlas  10946560 Nov 26 02:41 result.tar.gz
02:41:31 (25907): run_atlas exited; CPU time 489926.278065
02:41:31 (25907): called boinc_finish(0)

</stderr_txt>
]]>

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