Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
07:52:59 (3607328): wrapper (7.7.26015): starting
07:52:59 (3607328): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 07:52:59] Arguments: --nthreads 4
[2025-11-25 07:52:59] Threads: 4
[2025-11-25 07:52:59] Checking for CVMFS
[2025-11-25 07:52:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:52:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:52:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:52:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:52:59] 2.13.2.0 774864 2892 60180 153285 2 81 2782243 4096001 5100 130560 0 8521560 99.932 511756 1477 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 07:52:59] CVMFS is ok
[2025-11-25 07:52:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:52:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 07:52:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 07:52:59] Further information can be found at the LHC@home message board.
[2025-11-25 07:52:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:52:59] Checking for apptainer binary...
[2025-11-25 07:52:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:52:59] Running /usr/bin/apptainer --version
[2025-11-25 07:52:59] apptainer version 1.4.3
[2025-11-25 07:52:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:52:59] msi670e
[2025-11-25 07:52:59] apptainer works
[2025-11-25 07:52:59] Set ATHENA_PROC_NUMBER=4
[2025-11-25 07:52:59] Set ATHENA_CORE_NUMBER=4
[2025-11-25 07:52:59] Starting ATLAS job with PandaID=6895365851
[2025-11-25 07:52:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:31:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:31:51] 2025-11-25 21:30:43,587 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 14:31:51] 2025-11-25 21:30:43,600 | INFO     | monitor loop #1806: job 0:6895365851 is in state 'finished'
[2025-11-25 14:31:51] 2025-11-25 21:30:43,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,360 | INFO     | time since job start (23860s) is within the limit (172800.0s)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,599 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 14:31:51] 2025-11-25 21:30:45,601 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4873.03684375
[2025-11-25 14:31:51] 2025-11-25 21:30:45,604 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6895365851/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,605 | INFO     | extracted standard info from prmon json
[2025-11-25 14:31:51] 2025-11-25 21:30:45,605 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:31:51] 2025-11-25 21:30:45,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:31:51] 2025-11-25 21:30:45,608 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:31:51] 2025-11-25 21:30:45,608 | INFO     | sum of square deviations: 18535566140.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | sum of deviations: 130149235585.99998
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | mean x: 1764094299.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | mean y: 2251613.4884910486
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | intersect: -12384503815.63219
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | chi2: 2.48118885067926
[2025-11-25 14:31:51] 2025-11-25 21:30:45,610 | INFO     | sum of square deviations: 17833534372.5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | sum of deviations: 169864739612.50003
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | mean x: 1764094146.5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | mean y: 2260181.3082901556
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | intersect: -16800768684.873238
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | chi2: 1.5188965381689319
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | current chi2=1.5188965381689319 (change=38.783517516084565 %)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,612 | INFO     | sum of square deviations: 17149456430.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | sum of deviations: 166154540912.99985
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | mean x: 1764093994.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | mean y: 2259354.1338582677
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | intersect: -17089374360.139517
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | chi2: 1.5181390736615368
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | current chi2=1.5181390736615368 (change=0.04986939454798245 %)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | right removable region: 380
[2025-11-25 14:31:51] 2025-11-25 21:30:45,614 | INFO     | sum of square deviations: 17833534372.5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | sum of deviations: 74615189020.00005
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | mean x: 1764094451.5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | mean y: 2263603.839378238
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | intersect: -7378676046.058718
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | chi2: 1.007285418299654
[2025-11-25 14:31:51] 2025-11-25 21:30:45,616 | INFO     | current chi2=1.007285418299654 (change=59.403113631439396 %)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,617 | INFO     | sum of square deviations: 17149456430.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,618 | INFO     | sum of deviations: 74756852309.00002
[2025-11-25 14:31:51] 2025-11-25 21:30:45,618 | INFO     | mean x: 1764094604.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,618 | INFO     | mean y: 2263570.5800524936
[2025-11-25 14:31:51] 2025-11-25 21:30:45,618 | INFO     | intersect: -7687668778.507929
[2025-11-25 14:31:51] 2025-11-25 21:30:45,619 | INFO     | chi2: 1.0029898660383205
[2025-11-25 14:31:51] 2025-11-25 21:30:45,619 | INFO     | current chi2=1.0029898660383205 (change=0.42644837136475067 %)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,619 | INFO     | left removable region: 20
[2025-11-25 14:31:51] 2025-11-25 21:30:45,619 | INFO     | sum of square deviations: 14467136370.0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,620 | INFO     | sum of deviations: 96319573522.00003
[2025-11-25 14:31:51] 2025-11-25 21:30:45,620 | INFO     | mean x: 1764094573.5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,620 | INFO     | mean y: 2275228.072222222
[2025-11-25 14:31:51] 2025-11-25 21:30:45,620 | INFO     | intersect: -11742746912.200487
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | chi2: 0.017694071831711646
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | current memory leak: 6.66 B/s (using 360 data points, chi2=0.02)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | could have reported an average CPU frequency of 4974 MHz (17 samples)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | ..............................
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . Timing measurements:
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . get job = 0 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . initial setup = 2 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . payload setup = 2 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . stage-in = 0 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . payload execution = 23829 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . stage-out = 7 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | . log creation = 0 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,621 | INFO     | ..............................
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | 
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | job summary report
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | --------------------------------------------------
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | PanDA job id: 6895365851
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | task id: 47556137
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | errors: (none)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | pilot state: finished 
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | transexitcode: 0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | exeerrorcode: 0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | exeerrordiag: 
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | exitcode: 0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | exitmsg: OK
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | cpuconsumptiontime: 94494 s
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | nevents: 1000
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | neventsw: 0
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | pid: 3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | pgrp: 3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | corecount: 4
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | event service: False
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | sizes: {0: 2284321, 2: 2284583, 11: 2284611, 23835: 2320822, 23844: 2329858, 23845: 2329914, 23847: 2330352}
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | --------------------------------------------------
[2025-11-25 14:31:51] 2025-11-25 21:30:45,663 | INFO     | 
[2025-11-25 14:31:51] 2025-11-25 21:30:45,664 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | job 6895365851 has completed (purged errors)
[2025-11-25 14:31:51] 2025-11-25 21:30:45,676 | INFO     | overall cleanup function is called
[2025-11-25 14:31:51] 2025-11-25 21:30:46,685 | INFO     | --- collectZombieJob: --- 10, [3617848]
[2025-11-25 14:31:51] 2025-11-25 21:30:46,685 | INFO     | zombie collector waiting for pid 3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:46,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:31:51] 2025-11-25 21:30:46,685 | INFO     | collected zombie processes
[2025-11-25 14:31:51] 2025-11-25 21:30:46,685 | INFO     | will attempt to kill all subprocesses of pid=3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:46,771 | INFO     | process IDs to be killed: [3617848] (in reverse order)
[2025-11-25 14:31:51] 2025-11-25 21:30:46,810 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:31:51] 2025-11-25 21:30:46,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:31:51] 2025-11-25 21:30:46,813 | INFO     | did not find any defunct processes belonging to 3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:46,816 | INFO     | did not find any defunct processes belonging to 3617848
[2025-11-25 14:31:51] 2025-11-25 21:30:46,817 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:31:51] 2025-11-25 21:30:46,817 | INFO     | ready for new job
[2025-11-25 14:31:51] 2025-11-25 21:30:46,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:31:51] 2025-11-25 21:30:46,818 | INFO     | ***************************************
[2025-11-25 14:31:51] 2025-11-25 21:30:46,819 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:31:51] 2025-11-25 21:30:46,819 | INFO     | ***************************************
[2025-11-25 14:31:51] 2025-11-25 21:30:46,819 | INFO     | 
[2025-11-25 14:31:51] 2025-11-25 21:30:46,819 | INFO     | architecture information:
[2025-11-25 14:31:51] 2025-11-25 21:30:46,820 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:31:51] 2025-11-25 21:30:46,829 | INFO     | cat /etc/os-release:
[2025-11-25 14:31:51] NAME="CentOS Linux"
[2025-11-25 14:31:51] VERSION="7 (Core)"
[2025-11-25 14:31:51] ID="centos"
[2025-11-25 14:31:51] ID_LIKE="rhel fedora"
[2025-11-25 14:31:51] VERSION_ID="7"
[2025-11-25 14:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:31:51] ANSI_COLOR="0;31"
[2025-11-25 14:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:31:51] HOME_URL="https://www.centos.org/"
[2025-11-25 14:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:31:51] 
[2025-11-25 14:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:31:51] 
[2025-11-25 14:31:51] 2025-11-25 21:30:46,829 | INFO     | ***************************************
[2025-11-25 14:31:51] 2025-11-25 21:30:47,332 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-25 14:31:51] 2025-11-25 21:30:47,341 | INFO     | sufficient remaining disk space (437479538688 B)
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | INFO     | update_server=False
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | INFO     | aborting loop
[2025-11-25 14:31:51] 2025-11-25 21:30:47,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:31:51] 2025-11-25 21:30:47,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:31:51] 2025-11-25 21:30:47,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:31:51] 2025-11-25 21:30:47,404 | INFO     | all data control threads have been joined
[2025-11-25 14:31:51] 2025-11-25 21:30:47,665 | INFO     | all job control threads have been joined
[2025-11-25 14:31:51] 2025-11-25 21:30:48,272 | INFO     | all payload control threads have been joined
[2025-11-25 14:31:51] 2025-11-25 21:30:48,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:31:51] 2025-11-25 21:30:48,346 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,347 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,347 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,409 | INFO     | [data] control thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,559 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:48,670 | INFO     | [job] control thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,035 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,174 | INFO     | [job] validate thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,257 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,269 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,277 | INFO     | [payload] control thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,548 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:49,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:31:51] 2025-11-25 21:30:49,743 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:50,319 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:30:53,577 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:31:51] 2025-11-25 21:31:44,739 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:31:51] 2025-11-25 21:31:45,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138414289598272)>', '<ExcThread(monitor, started 138413944583936)>']
[2025-11-25 14:31:51] 2025-11-25 21:31:46,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:31:51] 2025-11-25 21:31:46,629 | INFO     | [monitor] control thread has ended
[2025-11-25 14:31:51] 2025-11-25 21:31:50,901 | INFO     | all workflow threads have been joined
[2025-11-25 14:31:51] 2025-11-25 21:31:50,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:31:51] 2025-11-25 21:31:50,901 | INFO     | traces error code: 0
[2025-11-25 14:31:51] 2025-11-25 21:31:50,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:31:51] 2025-11-25 21:31:50,956 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:31:51] 2025-11-25 21:31:50,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:31:51] 2025-11-25 21:31:50,959 [wrapper] pilotpid: 3611183
[2025-11-25 14:31:51] 2025-11-25 21:31:50,961 [wrapper] Pilot exit status: 0
[2025-11-25 14:31:51] 2025-11-25 21:31:50,966 [wrapper] pandaids: 6895365851
[2025-11-25 14:31:51] 2025-11-25 21:31:50,990 [wrapper] cleanup supervisor_pilot 3974624 3611184
[2025-11-25 14:31:51] 2025-11-25 21:31:50,992 [wrapper] Test setup, not cleaning
[2025-11-25 14:31:51] 2025-11-25 21:31:50,994 [wrapper] apfmon messages muted
[2025-11-25 14:31:51] 2025-11-25 21:31:50,995 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:31:51] 2025-11-25 21:31:50,997 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:31:51]  *** Error codes and diagnostics ***
[2025-11-25 14:31:51]     "exeErrorCode": 0,
[2025-11-25 14:31:51]     "exeErrorDiag": "",
[2025-11-25 14:31:51]     "pilotErrorCode": 0,
[2025-11-25 14:31:51]     "pilotErrorDiag": "",
[2025-11-25 14:31:51]  *** Listing of results directory ***
[2025-11-25 14:31:51] total 1311208
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc    576529 Nov 23 10:39 pilot3.tar.gz
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc      5112 Nov 23 10:58 queuedata.json
[2025-11-25 14:31:51] -rwx------ 1 boinc boinc     36292 Nov 23 10:59 runpilot2-wrapper.sh
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc       100 Nov 25 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:31:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 07:52 run_atlas
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc       105 Nov 25 07:52 job.xml
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:52 start_atlas.sh
[2025-11-25 14:31:51] drwxrwx--x 2 boinc boinc      4096 Nov 25 07:52 shared
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc    590104 Nov 25 07:52 input.tar.gz
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc      9948 Nov 25 07:52 init_data.xml
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc 411567612 Nov 25 07:52 EVNT.47483658._000835.pool.root.1
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc         0 Nov 25 07:52 boinc_lockfile
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc      2785 Nov 25 07:52 pandaJob.out
[2025-11-25 14:31:51] -rw------- 1 boinc boinc    991909 Nov 25 07:53 agis_schedconf.cvmfs.json
[2025-11-25 14:31:51] drwx------ 5 boinc boinc      4096 Nov 25 07:53 pilot3
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc       531 Nov 25 14:27 boinc_task_state.xml
[2025-11-25 14:31:51] -rw------- 1 boinc boinc        95 Nov 25 14:29 pilot_heartbeat.json
[2025-11-25 14:31:51] -rw------- 1 boinc boinc 917766708 Nov 25 14:30 HITS.47556137._008214.pool.root.1
[2025-11-25 14:31:51] -rw------- 1 boinc boinc      1032 Nov 25 14:30 memory_monitor_summary.json
[2025-11-25 14:31:51] -rw------- 1 boinc boinc   1516240 Nov 25 14:30 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:31:51] -rw------- 1 boinc boinc   1232257 Nov 25 14:30 log.47556137._008214.job.log.tgz.1
[2025-11-25 14:31:51] -rw------- 1 boinc boinc      8554 Nov 25 14:30 heartbeat.json
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc      8192 Nov 25 14:31 boinc_mmap_file
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc        28 Nov 25 14:31 wrapper_checkpoint.txt
[2025-11-25 14:31:51] -rw------- 1 boinc boinc      4560 Nov 25 14:31 pilotlog.txt
[2025-11-25 14:31:51] -rw------- 1 boinc boinc   3475848 Nov 25 14:31 log.47556137._008214.job.log.1
[2025-11-25 14:31:51] -rw------- 1 boinc boinc       353 Nov 25 14:31 output.list
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc       620 Nov 25 14:31 runtime_log
[2025-11-25 14:31:51] -rw------- 1 boinc boinc   4730880 Nov 25 14:31 result.tar.gz
[2025-11-25 14:31:51] -rw------- 1 boinc boinc       660 Nov 25 14:31 TKxNDmfXTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU5KKDmX6decm.diag
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc      8920 Nov 25 14:31 runtime_log.err
[2025-11-25 14:31:51] -rw-r--r-- 1 boinc boinc     21392 Nov 25 14:31 stderr.txt
[2025-11-25 14:31:51] HITS file was successfully produced:
[2025-11-25 14:31:51] -rw------- 1 boinc boinc 917766708 Nov 25 14:30 shared/HITS.pool.root.1
[2025-11-25 14:31:51]  *** Contents of shared directory: ***
[2025-11-25 14:31:51] total 1303408
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:52 start_atlas.sh
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc    590104 Nov 25 07:52 input.tar.gz
[2025-11-25 14:31:51] -rw-r--r-- 2 boinc boinc 411567612 Nov 25 07:52 ATLAS.root_0
[2025-11-25 14:31:51] -rw------- 1 boinc boinc 917766708 Nov 25 14:30 HITS.pool.root.1
[2025-11-25 14:31:51] -rw------- 1 boinc boinc   4730880 Nov 25 14:31 result.tar.gz
14:31:52 (3607328): run_atlas exited; CPU time 94465.798026
14:31:52 (3607328): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN