Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:50:57 (14655): wrapper (7.7.26015): starting
08:50:57 (14655): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 08:50:57] Arguments: --nthreads 12
[2025-11-25 08:50:57] Threads: 12
[2025-11-25 08:50:57] Checking for CVMFS
[2025-11-25 08:50:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:50:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:50:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:50:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:50:57] 2.11.2.0 2998 286278 95524 153284 1 82 16255901 20275200 1 130560 1 128958231 99.967 16857749 14500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:50:57] CVMFS is ok
[2025-11-25 08:50:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:50:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:50:57] Further information can be found at the LHC@home message board.
[2025-11-25 08:50:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:50:57] Checking for apptainer binary...
[2025-11-25 08:50:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:50:57] Running /usr/bin/apptainer --version
[2025-11-25 08:50:57] apptainer version 1.3.2-1.el7
[2025-11-25 08:50:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:50:59] c-205-25.aglt2.org
[2025-11-25 08:50:59] apptainer works
[2025-11-25 08:50:59] Set ATHENA_PROC_NUMBER=12
[2025-11-25 08:50:59] Set ATHENA_CORE_NUMBER=12
[2025-11-25 08:50:59] Starting ATLAS job with PandaID=6895882310
[2025-11-25 08:50:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:07:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:07:02] 2025-11-25 21:05:56,231 | INFO     | monitor loop #1954: job 0:6895882310 is in state 'finished'
[2025-11-25 16:07:02] 2025-11-25 21:05:56,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,165 | INFO     | time since job start (26084s) is within the limit (172800.0s)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,848 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 16:07:02] 2025-11-25 21:05:57,852 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-25 16:07:02] 2025-11-25 21:05:57,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895882310/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,855 | INFO     | extracted standard info from prmon json
[2025-11-25 16:07:02] 2025-11-25 21:05:57,856 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:07:02] 2025-11-25 21:05:57,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:07:02] 2025-11-25 21:05:57,862 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:07:02] 2025-11-25 21:05:57,863 | INFO     | sum of square deviations: 24141113384.679157
[2025-11-25 16:07:02] 2025-11-25 21:05:57,867 | INFO     | sum of deviations: 360222165691.309
[2025-11-25 16:07:02] 2025-11-25 21:05:57,867 | INFO     | mean x: 1764091695.201405
[2025-11-25 16:07:02] 2025-11-25 21:05:57,867 | INFO     | mean y: 3428535.4847775176
[2025-11-25 16:07:02] 2025-11-25 21:05:57,867 | INFO     | intersect: -26319505324.1769
[2025-11-25 16:07:02] 2025-11-25 21:05:57,868 | INFO     | chi2: 5.938107787855651
[2025-11-25 16:07:02] 2025-11-25 21:05:57,868 | INFO     | sum of square deviations: 23302975061.973988
[2025-11-25 16:07:02] 2025-11-25 21:05:57,872 | INFO     | sum of deviations: 511675247690.92615
[2025-11-25 16:07:02] 2025-11-25 21:05:57,872 | INFO     | mean x: 1764091542.7037914
[2025-11-25 16:07:02] 2025-11-25 21:05:57,872 | INFO     | mean y: 3456063.983412322
[2025-11-25 16:07:02] 2025-11-25 21:05:57,872 | INFO     | intersect: -38731597063.86249
[2025-11-25 16:07:02] 2025-11-25 21:05:57,873 | INFO     | chi2: 3.294791809168697
[2025-11-25 16:07:02] 2025-11-25 21:05:57,873 | INFO     | current chi2=3.294791809168697 (change=44.51444926771023 %)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,873 | INFO     | sum of square deviations: 22484465014.26354
[2025-11-25 16:07:02] 2025-11-25 21:05:57,877 | INFO     | sum of deviations: 580950418270.3335
[2025-11-25 16:07:02] 2025-11-25 21:05:57,877 | INFO     | mean x: 1764091390.206235
[2025-11-25 16:07:02] 2025-11-25 21:05:57,877 | INFO     | mean y: 3468947.3333333335
[2025-11-25 16:07:02] 2025-11-25 21:05:57,877 | INFO     | intersect: -45576874207.69701
[2025-11-25 16:07:02] 2025-11-25 21:05:57,878 | INFO     | chi2: 2.596647813407438
[2025-11-25 16:07:02] 2025-11-25 21:05:57,878 | INFO     | current chi2=2.596647813407438 (change=21.189320485090263 %)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,878 | INFO     | right removable region: 416
[2025-11-25 16:07:02] 2025-11-25 21:05:57,879 | INFO     | sum of square deviations: 23302922601.974
[2025-11-25 16:07:02] 2025-11-25 21:05:57,882 | INFO     | sum of deviations: 214358758384.6443
[2025-11-25 16:07:02] 2025-11-25 21:05:57,883 | INFO     | mean x: 1764091847.7037914
[2025-11-25 16:07:02] 2025-11-25 21:05:57,883 | INFO     | mean y: 3455000.597156398
[2025-11-25 16:07:02] 2025-11-25 21:05:57,883 | INFO     | intersect: -16224060517.916586
[2025-11-25 16:07:02] 2025-11-25 21:05:57,883 | INFO     | chi2: 3.5039302079852925
[2025-11-25 16:07:02] 2025-11-25 21:05:57,883 | INFO     | current chi2=3.5039302079852925 (change=40.992478864203655 %)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,884 | INFO     | sum of square deviations: 22484386079.67378
[2025-11-25 16:07:02] 2025-11-25 21:05:57,888 | INFO     | sum of deviations: 180849511101.9544
[2025-11-25 16:07:02] 2025-11-25 21:05:57,888 | INFO     | mean x: 1764092000.203837
[2025-11-25 16:07:02] 2025-11-25 21:05:57,888 | INFO     | mean y: 3461237.153477218
[2025-11-25 16:07:02] 2025-11-25 21:05:57,888 | INFO     | intersect: -14185726523.865505
[2025-11-25 16:07:02] 2025-11-25 21:05:57,889 | INFO     | chi2: 3.442851480858469
[2025-11-25 16:07:02] 2025-11-25 21:05:57,889 | INFO     | current chi2=3.442851480858469 (change=1.7431490783585766 %)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,889 | INFO     | left removable region: 20
[2025-11-25 16:07:02] 2025-11-25 21:05:57,889 | INFO     | sum of square deviations: 19255655651.181786
[2025-11-25 16:07:02] 2025-11-25 21:05:57,893 | INFO     | sum of deviations: 361979009452.6665
[2025-11-25 16:07:02] 2025-11-25 21:05:57,893 | INFO     | mean x: 1764091969.7121212
[2025-11-25 16:07:02] 2025-11-25 21:05:57,893 | INFO     | mean y: 3511283.277777778
[2025-11-25 16:07:02] 2025-11-25 21:05:57,893 | INFO     | intersect: -33158915140.805374
[2025-11-25 16:07:02] 2025-11-25 21:05:57,894 | INFO     | chi2: 0.05594998028999767
[2025-11-25 16:07:02] 2025-11-25 21:05:57,894 | INFO     | current memory leak: 18.80 B/s (using 396 data points, chi2=0.06)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,894 | INFO     | could have reported an average CPU frequency of 2408 MHz (18 samples)
[2025-11-25 16:07:02] 2025-11-25 21:05:57,894 | INFO     | ..............................
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . Timing measurements:
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . get job = 0 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . initial setup = 2 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . payload setup = 7 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . stage-in = 0 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . payload execution = 26044 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . stage-out = 3 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | . log creation = 0 s
[2025-11-25 16:07:02] 2025-11-25 21:05:57,895 | INFO     | ..............................
[2025-11-25 16:07:02] 2025-11-25 21:05:58,265 | INFO     | 
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | job summary report
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | --------------------------------------------------
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | PanDA job id: 6895882310
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | task id: 47556149
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | errors: (none)
[2025-11-25 16:07:02] 2025-11-25 21:05:58,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | pilot state: finished 
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | transexitcode: 0
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | exeerrorcode: 0
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | exeerrordiag: 
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | exitcode: 0
[2025-11-25 16:07:02] 2025-11-25 21:05:58,267 | INFO     | exitmsg: OK
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | cpuconsumptiontime: 298034 s
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | nevents: 1000
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | neventsw: 0
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | pid: 24819
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | pgrp: 24819
[2025-11-25 16:07:02] 2025-11-25 21:05:58,268 | INFO     | corecount: 12
[2025-11-25 16:07:02] 2025-11-25 21:05:58,269 | INFO     | event service: False
[2025-11-25 16:07:02] 2025-11-25 21:05:58,269 | INFO     | sizes: {0: 2284315, 1: 2284343, 5: 2284605, 11: 2284661, 26055: 2321982, 26058: 2330976, 26061: 2331160, 26068: 2331406}
[2025-11-25 16:07:02] 2025-11-25 21:05:58,269 | INFO     | --------------------------------------------------
[2025-11-25 16:07:02] 2025-11-25 21:05:58,269 | INFO     | 
[2025-11-25 16:07:02] 2025-11-25 21:05:58,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 16:07:02] 2025-11-25 21:05:58,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:07:02] 2025-11-25 21:05:58,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:07:02] 2025-11-25 21:05:58,295 | INFO     | job 6895882310 has completed (purged errors)
[2025-11-25 16:07:02] 2025-11-25 21:05:58,295 | INFO     | overall cleanup function is called
[2025-11-25 16:07:02] 2025-11-25 21:05:59,311 | INFO     | --- collectZombieJob: --- 10, [24819]
[2025-11-25 16:07:02] 2025-11-25 21:05:59,312 | INFO     | zombie collector waiting for pid 24819
[2025-11-25 16:07:02] 2025-11-25 21:05:59,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:07:02] 2025-11-25 21:05:59,312 | INFO     | collected zombie processes
[2025-11-25 16:07:02] 2025-11-25 21:05:59,312 | INFO     | will attempt to kill all subprocesses of pid=24819
[2025-11-25 16:07:02] 2025-11-25 21:05:59,404 | INFO     | process IDs to be killed: [24819] (in reverse order)
[2025-11-25 16:07:02] 2025-11-25 21:05:59,454 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:07:02] 2025-11-25 21:05:59,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:07:02] 2025-11-25 21:05:59,457 | INFO     | did not find any defunct processes belonging to 24819
[2025-11-25 16:07:02] 2025-11-25 21:05:59,460 | INFO     | did not find any defunct processes belonging to 24819
[2025-11-25 16:07:02] 2025-11-25 21:05:59,462 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:07:02] 2025-11-25 21:05:59,463 | INFO     | ready for new job
[2025-11-25 16:07:02] 2025-11-25 21:05:59,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:07:02] 2025-11-25 21:05:59,465 | INFO     | ***************************************
[2025-11-25 16:07:02] 2025-11-25 21:05:59,465 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:07:02] 2025-11-25 21:05:59,466 | INFO     | ***************************************
[2025-11-25 16:07:02] 2025-11-25 21:05:59,466 | INFO     | 
[2025-11-25 16:07:02] 2025-11-25 21:05:59,466 | INFO     | architecture information:
[2025-11-25 16:07:02] 2025-11-25 21:05:59,467 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:07:02] 2025-11-25 21:05:59,484 | INFO     | cat /etc/os-release:
[2025-11-25 16:07:02] NAME="CentOS Linux"
[2025-11-25 16:07:02] VERSION="7 (Core)"
[2025-11-25 16:07:02] ID="centos"
[2025-11-25 16:07:02] ID_LIKE="rhel fedora"
[2025-11-25 16:07:02] VERSION_ID="7"
[2025-11-25 16:07:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:07:02] ANSI_COLOR="0;31"
[2025-11-25 16:07:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:07:02] HOME_URL="https://www.centos.org/"
[2025-11-25 16:07:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:07:02] 
[2025-11-25 16:07:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:07:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:07:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:07:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:07:02] 
[2025-11-25 16:07:02] 2025-11-25 21:05:59,484 | INFO     | ***************************************
[2025-11-25 16:07:02] 2025-11-25 21:05:59,987 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 16:07:02] 2025-11-25 21:06:00,005 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-25 16:07:02] 2025-11-25 21:06:00,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:07:02] 2025-11-25 21:06:00,006 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:07:02] 2025-11-25 21:06:00,006 | INFO     | update_server=False
[2025-11-25 16:07:02] 2025-11-25 21:06:00,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:07:02] 2025-11-25 21:06:00,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:07:02] 2025-11-25 21:06:00,006 | INFO     | aborting loop
[2025-11-25 16:07:02] 2025-11-25 21:06:00,300 | INFO     | all data control threads have been joined
[2025-11-25 16:07:02] 2025-11-25 21:06:00,775 | INFO     | all job control threads have been joined
[2025-11-25 16:07:02] 2025-11-25 21:06:00,917 | INFO     | all payload control threads have been joined
[2025-11-25 16:07:02] 2025-11-25 21:06:01,008 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,011 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:07:02] 2025-11-25 21:06:01,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,306 | INFO     | [data] control thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,402 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:07:02] 2025-11-25 21:06:01,661 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,745 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,781 | INFO     | [job] control thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,800 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:01,919 | INFO     | [payload] control thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:02,076 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:02,251 | INFO     | [job] validate thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:02,502 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:02,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:07:02] 2025-11-25 21:06:03,149 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:03,991 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:05,500 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:07:02] 2025-11-25 21:06:12,602 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-11-25 16:07:02] 2025-11-25 21:06:30,370 | INFO     | PID=18441 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 16:07:02] 2025-11-25 21:06:30,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:07:02] 2025-11-25 21:06:30,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:07:02] 2025-11-25 21:06:30,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:07:02] 2025-11-25 21:06:55,804 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:07:02] 2025-11-25 21:06:57,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066697615168)>', '<ExcThread(monitor, started 140065518905088)>']
[2025-11-25 16:07:02] 2025-11-25 21:06:57,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:07:02] 2025-11-25 21:06:57,508 | INFO     | [monitor] control thread has ended
[2025-11-25 16:07:02] 2025-11-25 21:07:02,249 | INFO     | all workflow threads have been joined
[2025-11-25 16:07:02] 2025-11-25 21:07:02,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:07:02] 2025-11-25 21:07:02,249 | INFO     | traces error code: 0
[2025-11-25 16:07:02] 2025-11-25 21:07:02,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:07:02] 2025-11-25 21:07:02,343 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:07:02] 2025-11-25 21:07:02,347 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:07:02] 2025-11-25 21:07:02,350 [wrapper] pilotpid: 18441
[2025-11-25 16:07:02] 2025-11-25 21:07:02,354 [wrapper] Pilot exit status: 0
[2025-11-25 16:07:02] 2025-11-25 21:07:02,367 [wrapper] pandaids: 6895882310
[2025-11-25 16:07:02] 2025-11-25 21:07:02,413 [wrapper] cleanup supervisor_pilot 29945 18442
[2025-11-25 16:07:02] 2025-11-25 21:07:02,417 [wrapper] Test setup, not cleaning
[2025-11-25 16:07:02] 2025-11-25 21:07:02,421 [wrapper] apfmon messages muted
[2025-11-25 16:07:02] 2025-11-25 21:07:02,425 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:07:02] 2025-11-25 21:07:02,429 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:07:02]  *** Error codes and diagnostics ***
[2025-11-25 16:07:02]     "exeErrorCode": 0,
[2025-11-25 16:07:02]     "exeErrorDiag": "",
[2025-11-25 16:07:02]     "pilotErrorCode": 0,
[2025-11-25 16:07:02]     "pilotErrorDiag": "",
[2025-11-25 16:07:02]  *** Listing of results directory ***
[2025-11-25 16:07:02] total 1317260
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 11:27 queuedata.json
[2025-11-25 16:07:02] -rwx------ 1 boincer umatlas     36292 Nov 24 11:30 runpilot2-wrapper.sh
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:07:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:50 run_atlas
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:50 job.xml
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas 409697351 Nov 25 08:50 EVNT.47483658._001384.pool.root.1
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:50 start_atlas.sh
[2025-11-25 16:07:02] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:50 shared
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 08:50 input.tar.gz
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:50 boinc_lockfile
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 08:50 pandaJob.out
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas        57 Nov 25 08:51 setup.sh.local
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas    991909 Nov 25 08:51 agis_schedconf.cvmfs.json
[2025-11-25 16:07:02] drwx------ 5 boincer umatlas      4096 Nov 25 08:51 pilot3
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:54 boinc_task_state.xml
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 16:04 init_data.xml
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas 923623898 Nov 25 16:05 HITS.47556149._003706.pool.root.1
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas      1064 Nov 25 16:05 memory_monitor_summary.json
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas        95 Nov 25 16:05 pilot_heartbeat.json
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas   1516240 Nov 25 16:05 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas   2172152 Nov 25 16:05 log.47556149._003706.job.log.tgz.1
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas      8663 Nov 25 16:05 heartbeat.json
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 16:06 boinc_mmap_file
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas        29 Nov 25 16:06 wrapper_checkpoint.txt
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas      4746 Nov 25 16:07 pilotlog.txt
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas   3645198 Nov 25 16:07 log.47556149._003706.job.log.1
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas       353 Nov 25 16:07 output.list
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas       620 Nov 25 16:07 runtime_log
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas   5836800 Nov 25 16:07 result.tar.gz
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 16:07 runtime_log.err
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas       670 Nov 25 16:07 rq0LDm6coh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmc7IKDm6BDLUo.diag
[2025-11-25 16:07:02] -rw-r--r-- 1 boincer umatlas     21308 Nov 25 16:07 stderr.txt
[2025-11-25 16:07:02] HITS file was successfully produced:
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas 923623898 Nov 25 16:05 shared/HITS.pool.root.1
[2025-11-25 16:07:02]  *** Contents of shared directory: ***
[2025-11-25 16:07:02] total 1308376
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas 409697351 Nov 25 08:50 ATLAS.root_0
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:50 start_atlas.sh
[2025-11-25 16:07:02] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 08:50 input.tar.gz
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas 923623898 Nov 25 16:05 HITS.pool.root.1
[2025-11-25 16:07:02] -rw------- 1 boincer umatlas   5836800 Nov 25 16:07 result.tar.gz
16:07:04 (14655): run_atlas exited; CPU time 291437.934571
16:07:04 (14655): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN