Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:32:03 (984934): wrapper (7.7.26015): starting
04:32:03 (984934): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 04:32:03] Arguments: --nthreads 12
[2025-11-26 04:32:03] Threads: 12
[2025-11-26 04:32:03] Checking for CVMFS
[2025-11-26 04:32:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:32:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:32:04] 2.13.0.0 557766 2279 88344 153307 0 81 4488206 6144001 0 130560 0 1441875 99.985 86235 897 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 04:32:04] CVMFS is ok
[2025-11-26 04:32:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:32:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 04:32:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 04:32:04] Further information can be found at the LHC@home message board.
[2025-11-26 04:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:32:04] Checking for apptainer binary...
[2025-11-26 04:32:04] apptainer is not installed, using version from CVMFS
[2025-11-26 04:32:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:32:04] Debian-bookworm-latest-amd64-base
[2025-11-26 04:32:04] apptainer works
[2025-11-26 04:32:04] Set ATHENA_PROC_NUMBER=12
[2025-11-26 04:32:04] Set ATHENA_CORE_NUMBER=12
[2025-11-26 04:32:04] Starting ATLAS job with PandaID=6895816690
[2025-11-26 04:32:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:16:36]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:16:36] 2025-11-26 07:15:51,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:16:36] 2025-11-26 07:15:51,411 | INFO     | PID=988798 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:16:36] 2025-11-26 07:15:52,411 | INFO     | time since job start (13423s) is within the limit (172800.0s)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,152 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:16:36] 2025-11-26 07:15:53,154 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3795.6756250000003
[2025-11-26 08:16:36] 2025-11-26 07:15:53,155 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895816690/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,156 | INFO     | extracted standard info from prmon json
[2025-11-26 08:16:36] 2025-11-26 07:15:53,156 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:16:36] 2025-11-26 07:15:53,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:16:36] 2025-11-26 07:15:53,157 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:16:36] 2025-11-26 07:15:53,158 | INFO     | sum of square deviations: 3301758704.799993
[2025-11-26 08:16:36] 2025-11-26 07:15:53,158 | INFO     | sum of deviations: 144902348335.7999
[2025-11-26 08:16:36] 2025-11-26 07:15:53,158 | INFO     | mean x: 1764134626.6
[2025-11-26 08:16:36] 2025-11-26 07:15:53,158 | INFO     | mean y: 3625246.327272727
[2025-11-26 08:16:36] 2025-11-26 07:15:53,158 | INFO     | intersect: -77417916734.68321
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | chi2: 3.2790786396347897
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | sum of square deviations: 3081696748.1395392
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | sum of deviations: 186196907063.16272
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | mean x: 1764134474.0930233
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | mean y: 3653474.641860465
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | intersect: -106585803426.95807
[2025-11-26 08:16:36] 2025-11-26 07:15:53,159 | INFO     | chi2: 1.8758663896705285
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | current chi2=1.8758663896705285 (change=42.7928819090641 %)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | sum of square deviations: 2871648340.7809424
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | sum of deviations: 176895796130.60953
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | mean x: 1764134321.5904763
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | mean y: 3646721.7047619047
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | intersect: -108668414849.1119
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | chi2: 1.876189411364459
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | current chi2=1.876189411364459 (change=-0.017219866815100706 %)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,160 | INFO     | right removable region: 209
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | sum of square deviations: 3081710659.748845
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | sum of deviations: 80671721732.92563
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | mean x: 1764134779.1023257
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | mean y: 3669426.548837209
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | intersect: -46177106678.73211
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | chi2: 1.464833459862689
[2025-11-26 08:16:36] 2025-11-26 07:15:53,161 | INFO     | current chi2=1.464833459862689 (change=55.327894788585 %)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | sum of square deviations: 2871662802.195251
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | sum of deviations: 68611440526.29048
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | mean x: 1764134931.6047618
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | mean y: 3678167.5095238094
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | intersect: -42146061296.19854
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | chi2: 1.4537101269361625
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | current chi2=1.4537101269361625 (change=0.7593581954066809 %)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,162 | INFO     | left removable region: 20
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | sum of square deviations: 2093407077.089942
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | sum of deviations: 84976322559.10576
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | mean x: 1764134901.1005292
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | mean y: 3716222.9417989417
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | intersect: -71606673382.73636
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | chi2: 0.016686285927407073
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | current memory leak: 40.59 B/s (using 189 data points, chi2=0.02)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,163 | INFO     | could have reported an average CPU frequency of 3903 MHz (11 samples)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | ..............................
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . Timing measurements:
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . get job = 0 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . initial setup = 1 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . payload setup = 2 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . stage-in = 0 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . payload execution = 13399 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . stage-out = 1 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | . log creation = 0 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,164 | INFO     | ..............................
[2025-11-26 08:16:36] 2025-11-26 07:15:53,217 | INFO     | 
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | job summary report
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | --------------------------------------------------
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | PanDA job id: 6895816690
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | task id: 47556161
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | errors: (none)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | pilot state: finished 
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | transexitcode: 0
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | exeerrorcode: 0
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | exeerrordiag: 
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | exitcode: 0
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | exitmsg: OK
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | cpuconsumptiontime: 155411 s
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | nevents: 1000
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | neventsw: 0
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | pid: 995555
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | pgrp: 995555
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | corecount: 12
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | event service: False
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | sizes: {0: 2284319, 2: 2284581, 11: 2284609, 13405: 2315901, 13407: 2324965, 13411: 2325155}
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | --------------------------------------------------
[2025-11-26 08:16:36] 2025-11-26 07:15:53,218 | INFO     | 
[2025-11-26 08:16:36] 2025-11-26 07:15:53,219 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | job 6895816690 has completed (purged errors)
[2025-11-26 08:16:36] 2025-11-26 07:15:53,232 | INFO     | overall cleanup function is called
[2025-11-26 08:16:36] 2025-11-26 07:15:54,246 | INFO     | --- collectZombieJob: --- 10, [995555]
[2025-11-26 08:16:36] 2025-11-26 07:15:54,246 | INFO     | zombie collector waiting for pid 995555
[2025-11-26 08:16:36] 2025-11-26 07:15:54,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:16:36] 2025-11-26 07:15:54,246 | INFO     | collected zombie processes
[2025-11-26 08:16:36] 2025-11-26 07:15:54,246 | INFO     | will attempt to kill all subprocesses of pid=995555
[2025-11-26 08:16:36] 2025-11-26 07:15:54,279 | INFO     | process IDs to be killed: [995555] (in reverse order)
[2025-11-26 08:16:36] 2025-11-26 07:15:54,302 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:16:36] 2025-11-26 07:15:54,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:16:36] 2025-11-26 07:15:54,303 | INFO     | did not find any defunct processes belonging to 995555
[2025-11-26 08:16:36] 2025-11-26 07:15:54,304 | INFO     | did not find any defunct processes belonging to 995555
[2025-11-26 08:16:36] 2025-11-26 07:15:54,305 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:16:36] 2025-11-26 07:15:54,305 | INFO     | ready for new job
[2025-11-26 08:16:36] 2025-11-26 07:15:54,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:16:36] 2025-11-26 07:15:54,306 | INFO     | ***************************************
[2025-11-26 08:16:36] 2025-11-26 07:15:54,306 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:16:36] 2025-11-26 07:15:54,306 | INFO     | ***************************************
[2025-11-26 08:16:36] 2025-11-26 07:15:54,306 | INFO     | 
[2025-11-26 08:16:36] 2025-11-26 07:15:54,307 | INFO     | architecture information:
[2025-11-26 08:16:36] 2025-11-26 07:15:54,307 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:16:36] 2025-11-26 07:15:54,317 | INFO     | cat /etc/os-release:
[2025-11-26 08:16:36] NAME="CentOS Linux"
[2025-11-26 08:16:36] VERSION="7 (Core)"
[2025-11-26 08:16:36] ID="centos"
[2025-11-26 08:16:36] ID_LIKE="rhel fedora"
[2025-11-26 08:16:36] VERSION_ID="7"
[2025-11-26 08:16:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:16:36] ANSI_COLOR="0;31"
[2025-11-26 08:16:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:16:36] HOME_URL="https://www.centos.org/"
[2025-11-26 08:16:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:16:36] 
[2025-11-26 08:16:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:16:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:16:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:16:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:16:36] 
[2025-11-26 08:16:36] 2025-11-26 07:15:54,317 | INFO     | ***************************************
[2025-11-26 08:16:36] 2025-11-26 07:15:54,817 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | INFO     | sufficient remaining disk space (756088307712 B)
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | INFO     | update_server=False
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:16:36] 2025-11-26 07:15:54,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:36] 2025-11-26 07:15:54,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:36] 2025-11-26 07:15:54,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:16:36] 2025-11-26 07:15:54,832 | INFO     | aborting loop
[2025-11-26 08:16:36] 2025-11-26 07:15:55,397 | INFO     | all data control threads have been joined
[2025-11-26 08:16:36] 2025-11-26 07:15:55,617 | INFO     | all payload control threads have been joined
[2025-11-26 08:16:36] 2025-11-26 07:15:55,653 | INFO     | all job control threads have been joined
[2025-11-26 08:16:36] 2025-11-26 07:15:55,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:16:36] 2025-11-26 07:15:55,833 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:55,837 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:55,837 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:55,872 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,337 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,403 | INFO     | [data] control thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,411 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,622 | INFO     | [payload] control thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,658 | INFO     | [job] control thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,710 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,713 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,714 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:56,837 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:57,297 | INFO     | [job] validate thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:15:59,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:16:05,767 | INFO     | job.realtimelogging is not enabled
[2025-11-26 08:16:36] 2025-11-26 07:16:06,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:16:36] 2025-11-26 07:16:25,524 | INFO     | PID=988798 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:16:36] 2025-11-26 07:16:25,524 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:16:36] 2025-11-26 07:16:25,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:16:36] 2025-11-26 07:16:25,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:16:36] 2025-11-26 07:16:30,730 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:16:36] 2025-11-26 07:16:31,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271233681216)>', '<ExcThread(monitor, started 140270830065408)>']
[2025-11-26 08:16:36] 2025-11-26 07:16:31,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:16:36] 2025-11-26 07:16:31,554 | INFO     | [monitor] control thread has ended
[2025-11-26 08:16:36] 2025-11-26 07:16:36,441 | INFO     | all workflow threads have been joined
[2025-11-26 08:16:36] 2025-11-26 07:16:36,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:16:36] 2025-11-26 07:16:36,442 | INFO     | traces error code: 0
[2025-11-26 08:16:36] 2025-11-26 07:16:36,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:16:36] 2025-11-26 07:16:36,490 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:16:36] 2025-11-26 07:16:36,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:16:36] 2025-11-26 07:16:36,492 [wrapper] pilotpid: 988798
[2025-11-26 08:16:36] 2025-11-26 07:16:36,494 [wrapper] Pilot exit status: 0
[2025-11-26 08:16:36] 2025-11-26 07:16:36,499 [wrapper] pandaids: 6895816690
[2025-11-26 08:16:36] 2025-11-26 07:16:36,511 [wrapper] cleanup supervisor_pilot 1021729 988799
[2025-11-26 08:16:36] 2025-11-26 07:16:36,513 [wrapper] Test setup, not cleaning
[2025-11-26 08:16:36] 2025-11-26 07:16:36,514 [wrapper] apfmon messages muted
[2025-11-26 08:16:36] 2025-11-26 07:16:36,515 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:16:36] 2025-11-26 07:16:36,516 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:16:36]  *** Error codes and diagnostics ***
[2025-11-26 08:16:36]     "exeErrorCode": 0,
[2025-11-26 08:16:36]     "exeErrorDiag": "",
[2025-11-26 08:16:36]     "pilotErrorCode": 0,
[2025-11-26 08:16:36]     "pilotErrorDiag": "",
[2025-11-26 08:16:36]  *** Listing of results directory ***
[2025-11-26 08:16:36] total 1314560
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc    576529 Nov 24 16:13 pilot3.tar.gz
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc      5112 Nov 24 17:01 queuedata.json
[2025-11-26 08:16:36] -rwx------ 1 boinc boinc     36292 Nov 24 17:04 runpilot2-wrapper.sh
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc       100 Nov 26 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:16:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 04:32 run_atlas
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc       105 Nov 26 04:32 job.xml
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc      6729 Nov 26 04:32 init_data.xml
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc 407668464 Nov 26 04:32 EVNT.47483658._002052.pool.root.1
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:32 start_atlas.sh
[2025-11-26 08:16:36] drwxrwx--x 2 boinc boinc      4096 Nov 26 04:32 shared
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc    590103 Nov 26 04:32 input.tar.gz
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:32 boinc_lockfile
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc      2784 Nov 26 04:32 pandaJob.out
[2025-11-26 08:16:36] -rw------- 1 boinc boinc    991877 Nov 26 04:32 agis_schedconf.cvmfs.json
[2025-11-26 08:16:36] drwx------ 5 boinc boinc      4096 Nov 26 04:32 pilot3
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc       532 Nov 26 08:12 boinc_task_state.xml
[2025-11-26 08:16:36] -rw------- 1 boinc boinc 926777474 Nov 26 08:15 HITS.47556161._000358.pool.root.1
[2025-11-26 08:16:36] -rw------- 1 boinc boinc        95 Nov 26 08:15 pilot_heartbeat.json
[2025-11-26 08:16:36] -rw------- 1 boinc boinc      1038 Nov 26 08:15 memory_monitor_summary.json
[2025-11-26 08:16:36] -rw------- 1 boinc boinc   1516240 Nov 26 08:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:16:36] -rw------- 1 boinc boinc   1953685 Nov 26 08:15 log.47556161._000358.job.log.tgz.1
[2025-11-26 08:16:36] -rw------- 1 boinc boinc      8617 Nov 26 08:15 heartbeat.json
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc      8192 Nov 26 08:16 boinc_mmap_file
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc        29 Nov 26 08:16 wrapper_checkpoint.txt
[2025-11-26 08:16:36] -rw------- 1 boinc boinc      4827 Nov 26 08:16 pilotlog.txt
[2025-11-26 08:16:36] -rw------- 1 boinc boinc   1918555 Nov 26 08:16 log.47556161._000358.job.log.1
[2025-11-26 08:16:36] -rw------- 1 boinc boinc       353 Nov 26 08:16 output.list
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc       620 Nov 26 08:16 runtime_log
[2025-11-26 08:16:36] -rw------- 1 boinc boinc   3891200 Nov 26 08:16 result.tar.gz
[2025-11-26 08:16:36] -rw------- 1 boinc boinc       714 Nov 26 08:16 Z56NDmsEoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrkLKDmxazpOo.diag
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc      9133 Nov 26 08:16 runtime_log.err
[2025-11-26 08:16:36] -rw-r--r-- 1 boinc boinc     21515 Nov 26 08:16 stderr.txt
[2025-11-26 08:16:36] HITS file was successfully produced:
[2025-11-26 08:16:36] -rw------- 1 boinc boinc 926777474 Nov 26 08:15 shared/HITS.pool.root.1
[2025-11-26 08:16:36]  *** Contents of shared directory: ***
[2025-11-26 08:16:36] total 1307580
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc 407668464 Nov 26 04:32 ATLAS.root_0
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:32 start_atlas.sh
[2025-11-26 08:16:36] -rw-r--r-- 2 boinc boinc    590103 Nov 26 04:32 input.tar.gz
[2025-11-26 08:16:36] -rw------- 1 boinc boinc 926777474 Nov 26 08:15 HITS.pool.root.1
[2025-11-26 08:16:36] -rw------- 1 boinc boinc   3891200 Nov 26 08:16 result.tar.gz
08:16:38 (984934): run_atlas exited; CPU time 155225.265651
08:16:38 (984934): called boinc_finish(0)

</stderr_txt>
]]>

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