Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:28:48 (20856): wrapper (7.7.26015): starting
08:28:48 (20856): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:28:48] Arguments: --nthreads 8
[2025-11-25 08:28:48] Threads: 8
[2025-11-25 08:28:48] Checking for CVMFS
[2025-11-25 08:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:28:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:28:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:28:48] 2.11.2.0 16446 116285 136820 153284 1 82 16215923 18432000 1885 130560 0 83368282 99.974 4827490 30178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:28:48] CVMFS is ok
[2025-11-25 08:28:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:28:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:28:48] Further information can be found at the LHC@home message board.
[2025-11-25 08:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:28:48] Checking for apptainer binary...
[2025-11-25 08:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:28:48] Running /usr/bin/apptainer --version
[2025-11-25 08:28:48] apptainer version 1.3.2-1.el7
[2025-11-25 08:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:28:49] c-206-26.aglt2.org
[2025-11-25 08:28:49] apptainer works
[2025-11-25 08:28:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:28:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:28:49] Starting ATLAS job with PandaID=6895674876
[2025-11-25 08:28:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:56:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:56:02] 2025-11-26 08:55:04,292 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2516.75
[2025-11-26 03:56:02] 2025-11-26 08:55:04,295 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895674876/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,295 | INFO     | extracted standard info from prmon json
[2025-11-26 03:56:02] 2025-11-26 08:55:04,295 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:56:02] 2025-11-26 08:55:04,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:56:02] 2025-11-26 08:55:04,311 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:56:02] 2025-11-26 08:55:04,312 | INFO     | sum of square deviations: 467915783094.105
[2025-11-26 03:56:02] 2025-11-26 08:55:04,336 | INFO     | sum of deviations: 2005533405743.184
[2025-11-26 03:56:02] 2025-11-26 08:55:04,336 | INFO     | mean x: 1764112318.5963383
[2025-11-26 03:56:02] 2025-11-26 08:55:04,336 | INFO     | mean y: 2875051.518744551
[2025-11-26 03:56:02] 2025-11-26 08:55:04,336 | INFO     | intersect: -7558285127.847285
[2025-11-26 03:56:02] 2025-11-26 08:55:04,337 | INFO     | chi2: 6.036396298384528
[2025-11-26 03:56:02] 2025-11-26 08:55:04,338 | INFO     | sum of square deviations: 461823403059.81885
[2025-11-26 03:56:02] 2025-11-26 08:55:04,378 | INFO     | sum of deviations: 2370967992509.0894
[2025-11-26 03:56:02] 2025-11-26 08:55:04,379 | INFO     | mean x: 1764112166.0989492
[2025-11-26 03:56:02] 2025-11-26 08:55:04,379 | INFO     | mean y: 2884194.822241681
[2025-11-26 03:56:02] 2025-11-26 08:55:04,379 | INFO     | intersect: -9053940239.158897
[2025-11-26 03:56:02] 2025-11-26 08:55:04,381 | INFO     | chi2: 3.0771094429259
[2025-11-26 03:56:02] 2025-11-26 08:55:04,381 | INFO     | current chi2=3.0771094429259 (change=49.024065173630134 %)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,382 | INFO     | sum of square deviations: 455784140300.5171
[2025-11-26 03:56:02] 2025-11-26 08:55:04,427 | INFO     | sum of deviations: 2525386709004.645
[2025-11-26 03:56:02] 2025-11-26 08:55:04,428 | INFO     | mean x: 1764112013.601583
[2025-11-26 03:56:02] 2025-11-26 08:55:04,428 | INFO     | mean y: 2888092.643799472
[2025-11-26 03:56:02] 2025-11-26 08:55:04,428 | INFO     | intersect: -9771618386.25091
[2025-11-26 03:56:02] 2025-11-26 08:55:04,430 | INFO     | chi2: 2.4544633275127894
[2025-11-26 03:56:02] 2025-11-26 08:55:04,430 | INFO     | current chi2=2.4544633275127894 (change=20.23477315194423 %)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,430 | INFO     | right removable region: 1136
[2025-11-26 03:56:02] 2025-11-26 08:55:04,432 | INFO     | sum of square deviations: 461823055543.0163
[2025-11-26 03:56:02] 2025-11-26 08:55:04,476 | INFO     | sum of deviations: 1707816106265.3613
[2025-11-26 03:56:02] 2025-11-26 08:55:04,477 | INFO     | mean x: 1764112471.0980735
[2025-11-26 03:56:02] 2025-11-26 08:55:04,477 | INFO     | mean y: 2882494.88966725
[2025-11-26 03:56:02] 2025-11-26 08:55:04,477 | INFO     | intersect: -6520784210.884516
[2025-11-26 03:56:02] 2025-11-26 08:55:04,479 | INFO     | chi2: 3.998705028449355
[2025-11-26 03:56:02] 2025-11-26 08:55:04,479 | INFO     | monitor loop #4996: job 0:6895674876 is in state 'finished'
[2025-11-26 03:56:02] 2025-11-26 08:55:04,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,479 | INFO     | current chi2=3.998705028449355 (change=33.75675103505884 %)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,481 | INFO     | sum of square deviations: 455783724159.7042
[2025-11-26 03:56:02] 2025-11-26 08:55:04,525 | INFO     | sum of deviations: 1632054114219.7449
[2025-11-26 03:56:02] 2025-11-26 08:55:04,525 | INFO     | mean x: 1764112623.596306
[2025-11-26 03:56:02] 2025-11-26 08:55:04,525 | INFO     | mean y: 2884407.6051011435
[2025-11-26 03:56:02] 2025-11-26 08:55:04,525 | INFO     | intersect: -6313987197.6620245
[2025-11-26 03:56:02] 2025-11-26 08:55:04,527 | INFO     | chi2: 3.9427438375884467
[2025-11-26 03:56:02] 2025-11-26 08:55:04,527 | INFO     | current chi2=3.9427438375884467 (change=1.3994828441399028 %)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,528 | INFO     | left removable region: 20
[2025-11-26 03:56:02] 2025-11-26 08:55:04,529 | INFO     | sum of square deviations: 430993052275.94257
[2025-11-26 03:56:02] 2025-11-26 08:55:04,571 | INFO     | sum of deviations: 2076826024507.1763
[2025-11-26 03:56:02] 2025-11-26 08:55:04,572 | INFO     | mean x: 1764112593.1039426
[2025-11-26 03:56:02] 2025-11-26 08:55:04,572 | INFO     | mean y: 2900980.1191756274
[2025-11-26 03:56:02] 2025-11-26 08:55:04,572 | INFO     | intersect: -8497827567.990676
[2025-11-26 03:56:02] 2025-11-26 08:55:04,574 | INFO     | chi2: 0.22527507962193033
[2025-11-26 03:56:02] 2025-11-26 08:55:04,574 | INFO     | current memory leak: 4.82 B/s (using 1116 data points, chi2=0.23)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,575 | INFO     | could have reported an average CPU frequency of 2632 MHz (42 samples)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | ..............................
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . Timing measurements:
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . get job = 0 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . initial setup = 2 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . payload setup = 5 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . stage-in = 0 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,576 | INFO     | . payload execution = 69927 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,577 | INFO     | . stage-out = 4 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,577 | INFO     | . log creation = 0 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,577 | INFO     | ..............................
[2025-11-26 03:56:02] 2025-11-26 08:55:04,626 | INFO     | time since job start (69964s) is within the limit (172800.0s)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,723 | INFO     | 
[2025-11-26 03:56:02] 2025-11-26 08:55:04,723 | INFO     | job summary report
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | --------------------------------------------------
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | PanDA job id: 6895674876
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | task id: 47556149
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | errors: (none)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:56:02] 2025-11-26 08:55:04,724 | INFO     | pilot state: finished 
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | transexitcode: 0
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | exeerrorcode: 0
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | exeerrordiag: 
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | exitcode: 0
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | exitmsg: OK
[2025-11-26 03:56:02] 2025-11-26 08:55:04,725 | INFO     | cpuconsumptiontime: 544475 s
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | nevents: 1000
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | neventsw: 0
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | pid: 30978
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | pgrp: 30978
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | corecount: 8
[2025-11-26 03:56:02] 2025-11-26 08:55:04,726 | INFO     | event service: False
[2025-11-26 03:56:02] 2025-11-26 08:55:04,727 | INFO     | sizes: {0: 2284309, 4: 2284571, 11: 2284599, 69936: 2341142, 69941: 2350136, 69944: 2350192, 69950: 2350566}
[2025-11-26 03:56:02] 2025-11-26 08:55:04,727 | INFO     | --------------------------------------------------
[2025-11-26 03:56:02] 2025-11-26 08:55:04,727 | INFO     | 
[2025-11-26 03:56:02] 2025-11-26 08:55:04,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 03:56:02] 2025-11-26 08:55:04,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:56:02] 2025-11-26 08:55:04,756 | INFO     | job 6895674876 has completed (purged errors)
[2025-11-26 03:56:02] 2025-11-26 08:55:04,756 | INFO     | overall cleanup function is called
[2025-11-26 03:56:02] 2025-11-26 08:55:05,772 | INFO     | --- collectZombieJob: --- 10, [30978]
[2025-11-26 03:56:02] 2025-11-26 08:55:05,772 | INFO     | zombie collector waiting for pid 30978
[2025-11-26 03:56:02] 2025-11-26 08:55:05,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:56:02] 2025-11-26 08:55:05,772 | INFO     | collected zombie processes
[2025-11-26 03:56:02] 2025-11-26 08:55:05,772 | INFO     | will attempt to kill all subprocesses of pid=30978
[2025-11-26 03:56:02] 2025-11-26 08:55:05,947 | INFO     | process IDs to be killed: [30978] (in reverse order)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,008 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:56:02] 2025-11-26 08:55:06,014 | INFO     | did not find any defunct processes belonging to 30978
[2025-11-26 03:56:02] 2025-11-26 08:55:06,019 | INFO     | did not find any defunct processes belonging to 30978
[2025-11-26 03:56:02] 2025-11-26 08:55:06,021 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:56:02] 2025-11-26 08:55:06,021 | INFO     | ready for new job
[2025-11-26 03:56:02] 2025-11-26 08:55:06,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:56:02] 2025-11-26 08:55:06,027 | INFO     | ***************************************
[2025-11-26 03:56:02] 2025-11-26 08:55:06,027 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:56:02] 2025-11-26 08:55:06,027 | INFO     | ***************************************
[2025-11-26 03:56:02] 2025-11-26 08:55:06,027 | INFO     | 
[2025-11-26 03:56:02] 2025-11-26 08:55:06,028 | INFO     | architecture information:
[2025-11-26 03:56:02] 2025-11-26 08:55:06,029 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:56:02] 2025-11-26 08:55:06,043 | INFO     | cat /etc/os-release:
[2025-11-26 03:56:02] NAME="CentOS Linux"
[2025-11-26 03:56:02] VERSION="7 (Core)"
[2025-11-26 03:56:02] ID="centos"
[2025-11-26 03:56:02] ID_LIKE="rhel fedora"
[2025-11-26 03:56:02] VERSION_ID="7"
[2025-11-26 03:56:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:56:02] ANSI_COLOR="0;31"
[2025-11-26 03:56:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:56:02] HOME_URL="https://www.centos.org/"
[2025-11-26 03:56:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:56:02] 
[2025-11-26 03:56:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:56:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:56:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:56:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:56:02] 
[2025-11-26 03:56:02] 2025-11-26 08:55:06,043 | INFO     | ***************************************
[2025-11-26 03:56:02] 2025-11-26 08:55:06,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | INFO     | sufficient remaining disk space (25578962944 B)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | INFO     | update_server=False
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,558 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:56:02] 2025-11-26 08:55:06,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:56:02] 2025-11-26 08:55:06,559 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:56:02] 2025-11-26 08:55:06,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:56:02] 2025-11-26 08:55:06,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:56:02] 2025-11-26 08:55:06,983 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 03:56:02] 2025-11-26 08:55:06,983 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 03:56:02] 2025-11-26 08:55:06,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:56:02] 2025-11-26 08:55:06,983 | INFO     | will abort loop
[2025-11-26 03:56:02] 2025-11-26 08:55:07,210 | INFO     | all job control threads have been joined
[2025-11-26 03:56:02] 2025-11-26 08:55:07,392 | INFO     | all payload control threads have been joined
[2025-11-26 03:56:02] 2025-11-26 08:55:07,563 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:07,564 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:07,647 | INFO     | all data control threads have been joined
[2025-11-26 03:56:02] 2025-11-26 08:55:07,742 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:07,911 | INFO     | [job] validate thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:07,989 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,135 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,173 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,217 | INFO     | [job] control thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,399 | INFO     | [payload] control thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,434 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,542 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,565 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,652 | INFO     | [data] control thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:08,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:09,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:56:02] 2025-11-26 08:55:13,562 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:56:02] 2025-11-26 08:55:55,731 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:56:02] 2025-11-26 08:55:57,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626178070336)>', '<ExcThread(monitor, started 140625584305920)>']
[2025-11-26 03:56:02] 2025-11-26 08:55:57,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:56:02] 2025-11-26 08:55:57,826 | INFO     | [monitor] control thread has ended
[2025-11-26 03:56:02] 2025-11-26 08:56:02,360 | INFO     | all workflow threads have been joined
[2025-11-26 03:56:02] 2025-11-26 08:56:02,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:56:02] 2025-11-26 08:56:02,361 | INFO     | traces error code: 0
[2025-11-26 03:56:02] 2025-11-26 08:56:02,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:56:02] 2025-11-26 08:56:02,479 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:56:02] 2025-11-26 08:56:02,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:56:02] 2025-11-26 08:56:02,486 [wrapper] pilotpid: 24532
[2025-11-26 03:56:02] 2025-11-26 08:56:02,488 [wrapper] Pilot exit status: 0
[2025-11-26 03:56:02] 2025-11-26 08:56:02,496 [wrapper] pandaids: 6895674876
[2025-11-26 03:56:02] 2025-11-26 08:56:02,538 [wrapper] cleanup supervisor_pilot 30457 24533
[2025-11-26 03:56:02] 2025-11-26 08:56:02,540 [wrapper] Test setup, not cleaning
[2025-11-26 03:56:02] 2025-11-26 08:56:02,542 [wrapper] apfmon messages muted
[2025-11-26 03:56:02] 2025-11-26 08:56:02,545 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:56:02] 2025-11-26 08:56:02,547 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:56:02]  *** Error codes and diagnostics ***
[2025-11-26 03:56:02]     "exeErrorCode": 0,
[2025-11-26 03:56:02]     "exeErrorDiag": "",
[2025-11-26 03:56:02]     "pilotErrorCode": 0,
[2025-11-26 03:56:02]     "pilotErrorDiag": "",
[2025-11-26 03:56:02]  *** Listing of results directory ***
[2025-11-26 03:56:02] total 1344196
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 10:13 pilot3.tar.gz
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 10:36 queuedata.json
[2025-11-26 03:56:02] -rwx------ 1 boincer umatlas     36292 Nov 24 10:36 runpilot2-wrapper.sh
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:56:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:28 run_atlas
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:28 job.xml
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas 411393615 Nov 25 08:28 EVNT.47483658._001369.pool.root.1
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:28 start_atlas.sh
[2025-11-26 03:56:02] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:28 shared
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 08:28 input.tar.gz
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:28 boinc_lockfile
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 08:28 pandaJob.out
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas        57 Nov 25 08:28 setup.sh.local
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas    991909 Nov 25 08:28 agis_schedconf.cvmfs.json
[2025-11-26 03:56:02] drwx------ 5 boincer umatlas      4096 Nov 25 08:29 pilot3
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas       533 Nov 26 03:40 boinc_task_state.xml
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas 937154181 Nov 26 03:54 HITS.47556149._003551.pool.root.1
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas        95 Nov 26 03:54 pilot_heartbeat.json
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas      1068 Nov 26 03:54 memory_monitor_summary.json
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas   1516240 Nov 26 03:54 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas   2312164 Nov 26 03:54 log.47556149._003551.job.log.tgz.1
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas      8658 Nov 26 03:55 heartbeat.json
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 03:55 init_data.xml
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 03:55 boinc_mmap_file
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas        29 Nov 26 03:55 wrapper_checkpoint.txt
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas      4738 Nov 26 03:56 pilotlog.txt
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas   9682126 Nov 26 03:56 log.47556149._003551.job.log.1
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas       353 Nov 26 03:56 output.list
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas       620 Nov 26 03:56 runtime_log
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas  12011520 Nov 26 03:56 result.tar.gz
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 03:56 runtime_log.err
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas       668 Nov 26 03:56 0QGMDm2mnh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD6IKDmAomv8n.diag
[2025-11-26 03:56:02] -rw-r--r-- 1 boincer umatlas     21240 Nov 26 03:56 stderr.txt
[2025-11-26 03:56:02] HITS file was successfully produced:
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas 937154181 Nov 26 03:54 shared/HITS.pool.root.1
[2025-11-26 03:56:02]  *** Contents of shared directory: ***
[2025-11-26 03:56:02] total 1329280
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas 411393615 Nov 25 08:28 ATLAS.root_0
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:28 start_atlas.sh
[2025-11-26 03:56:02] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 08:28 input.tar.gz
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas 937154181 Nov 26 03:54 HITS.pool.root.1
[2025-11-26 03:56:02] -rw------- 1 boincer umatlas  12011520 Nov 26 03:56 result.tar.gz
03:56:03 (20856): run_atlas exited; CPU time 543762.330041
03:56:03 (20856): called boinc_finish(0)

</stderr_txt>
]]>

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