Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:25:46 (30360): wrapper (7.7.26015): starting
08:25:46 (30360): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:25:46] Arguments: --nthreads 8
[2025-11-25 08:25:46] Threads: 8
[2025-11-25 08:25:46] Checking for CVMFS
[2025-11-25 08:25:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:25:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:25:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:25:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:25:46] 2.11.2.0 8318 116367 138404 153284 0 82 12551309 18432001 1885 130560 0 82899620 99.973 5069829 31744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:25:46] CVMFS is ok
[2025-11-25 08:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:25:46] Further information can be found at the LHC@home message board.
[2025-11-25 08:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:25:46] Checking for apptainer binary...
[2025-11-25 08:25:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:25:46] Running /usr/bin/apptainer --version
[2025-11-25 08:25:46] apptainer version 1.3.2-1.el7
[2025-11-25 08:25:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:25:47] c-206-28.aglt2.org
[2025-11-25 08:25:47] apptainer works
[2025-11-25 08:25:47] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:25:47] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:25:47] Starting ATLAS job with PandaID=6895365534
[2025-11-25 08:25:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:11:09 (22700): wrapper (7.7.26015): starting
12:11:09 (22700): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:11:09] Arguments: --nthreads 8
[2025-11-25 12:11:09] Threads: 8
[2025-11-25 12:11:09] This job has been restarted, cleaning up previous attempt
[2025-11-25 12:11:09] Checking for CVMFS
[2025-11-25 12:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:11:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:11:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:11:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:11:09] 2.11.2.0 8318 116592 131924 153290 2 1 12577118 18432000 1 130560 0 83105149 99.973 5077858 31749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 12:11:09] CVMFS is ok
[2025-11-25 12:11:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:11:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:11:09] Further information can be found at the LHC@home message board.
[2025-11-25 12:11:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:11:09] Checking for apptainer binary...
[2025-11-25 12:11:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:11:09] Running /usr/bin/apptainer --version
[2025-11-25 12:11:09] apptainer version 1.3.2-1.el7
[2025-11-25 12:11:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:11:11] c-206-28.aglt2.org
[2025-11-25 12:11:11] apptainer works
[2025-11-25 12:11:11] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:11:11] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:11:11] Starting ATLAS job with PandaID=6895365534
[2025-11-25 12:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:46:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:46:26] 2025-11-26 12:45:23,949 | INFO     | time since job start (70440s) is within the limit (172800.0s)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,418 | INFO     | monitor loop #5018: job 0:6895365534 is in state 'finished'
[2025-11-26 07:46:26] 2025-11-26 12:45:25,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,566 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:46:26] 2025-11-26 12:45:25,569 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2100.7083333333335
[2025-11-26 07:46:26] 2025-11-26 12:45:25,572 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895365534/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,573 | INFO     | extracted standard info from prmon json
[2025-11-26 07:46:26] 2025-11-26 12:45:25,573 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:46:26] 2025-11-26 12:45:25,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:46:26] 2025-11-26 12:45:25,588 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:46:26] 2025-11-26 12:45:25,589 | INFO     | sum of square deviations: 477776119683.3676
[2025-11-26 07:46:26] 2025-11-26 12:45:25,619 | INFO     | sum of deviations: 2518031743460.2334
[2025-11-26 07:46:26] 2025-11-26 12:45:25,619 | INFO     | mean x: 1764125907.8398268
[2025-11-26 07:46:26] 2025-11-26 12:45:25,619 | INFO     | mean y: 2859517.5904761907
[2025-11-26 07:46:26] 2025-11-26 12:45:25,620 | INFO     | intersect: -9294643753.073568
[2025-11-26 07:46:26] 2025-11-26 12:45:25,621 | INFO     | chi2: 5.659196226705331
[2025-11-26 07:46:26] 2025-11-26 12:45:25,622 | INFO     | sum of square deviations: 471598355507.3268
[2025-11-26 07:46:26] 2025-11-26 12:45:25,645 | INFO     | sum of deviations: 2880925255987.183
[2025-11-26 07:46:26] 2025-11-26 12:45:25,645 | INFO     | mean x: 1764125755.3434782
[2025-11-26 07:46:26] 2025-11-26 12:45:25,645 | INFO     | mean y: 2868470.6704347827
[2025-11-26 07:46:26] 2025-11-26 12:45:25,646 | INFO     | intersect: -10773917291.949837
[2025-11-26 07:46:26] 2025-11-26 12:45:25,646 | INFO     | chi2: 2.6414902163665737
[2025-11-26 07:46:26] 2025-11-26 12:45:25,647 | INFO     | current chi2=2.6414902163665737 (change=53.32393310729224 %)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,648 | INFO     | sum of square deviations: 465474080706.253
[2025-11-26 07:46:26] 2025-11-26 12:45:25,670 | INFO     | sum of deviations: 2932216800383.991
[2025-11-26 07:46:26] 2025-11-26 12:45:25,671 | INFO     | mean x: 1764125602.8471615
[2025-11-26 07:46:26] 2025-11-26 12:45:25,671 | INFO     | mean y: 2869744.274235808
[2025-11-26 07:46:26] 2025-11-26 12:45:25,671 | INFO     | intersect: -11110098614.366522
[2025-11-26 07:46:26] 2025-11-26 12:45:25,672 | INFO     | chi2: 2.4471093785173927
[2025-11-26 07:46:26] 2025-11-26 12:45:25,672 | INFO     | current chi2=2.4471093785173927 (change=7.358756683814484 %)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,672 | INFO     | right removable region: 1144
[2025-11-26 07:46:26] 2025-11-26 12:45:25,673 | INFO     | sum of square deviations: 471597834019.0123
[2025-11-26 07:46:26] 2025-11-26 12:45:25,696 | INFO     | sum of deviations: 2231668371105.933
[2025-11-26 07:46:26] 2025-11-26 12:45:25,697 | INFO     | mean x: 1764126060.3426087
[2025-11-26 07:46:26] 2025-11-26 12:45:25,697 | INFO     | mean y: 2866576.974782609
[2025-11-26 07:46:26] 2025-11-26 12:45:25,697 | INFO     | intersect: -8345230143.400739
[2025-11-26 07:46:26] 2025-11-26 12:45:25,698 | INFO     | chi2: 3.6838110737224725
[2025-11-26 07:46:26] 2025-11-26 12:45:25,698 | INFO     | current chi2=3.6838110737224725 (change=34.90575470172179 %)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,699 | INFO     | sum of square deviations: 465473177909.01685
[2025-11-26 07:46:26] 2025-11-26 12:45:25,722 | INFO     | sum of deviations: 2130837010541.5928
[2025-11-26 07:46:26] 2025-11-26 12:45:25,722 | INFO     | mean x: 1764126212.8436682
[2025-11-26 07:46:26] 2025-11-26 12:45:25,723 | INFO     | mean y: 2869087.316157205
[2025-11-26 07:46:26] 2025-11-26 12:45:25,723 | INFO     | intersect: -8072924758.593961
[2025-11-26 07:46:26] 2025-11-26 12:45:25,724 | INFO     | chi2: 3.575643052291475
[2025-11-26 07:46:26] 2025-11-26 12:45:25,724 | INFO     | current chi2=3.575643052291475 (change=2.936307515946908 %)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,724 | INFO     | left removable region: 20
[2025-11-26 07:46:26] 2025-11-26 12:45:25,725 | INFO     | sum of square deviations: 440329310895.0721
[2025-11-26 07:46:26] 2025-11-26 12:45:25,747 | INFO     | sum of deviations: 2390566948955.1123
[2025-11-26 07:46:26] 2025-11-26 12:45:25,747 | INFO     | mean x: 1764126182.3540926
[2025-11-26 07:46:26] 2025-11-26 12:45:25,747 | INFO     | mean y: 2883220.6379003557
[2025-11-26 07:46:26] 2025-11-26 12:45:25,747 | INFO     | intersect: -9574634425.756077
[2025-11-26 07:46:26] 2025-11-26 12:45:25,748 | INFO     | chi2: 0.26863676384008145
[2025-11-26 07:46:26] 2025-11-26 12:45:25,748 | INFO     | current memory leak: 5.43 B/s (using 1124 data points, chi2=0.27)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,749 | INFO     | could have reported an average CPU frequency of 2573 MHz (42 samples)
[2025-11-26 07:46:26] 2025-11-26 12:45:25,749 | INFO     | ..............................
[2025-11-26 07:46:26] 2025-11-26 12:45:25,749 | INFO     | . Timing measurements:
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . get job = 0 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . initial setup = 2 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . payload setup = 6 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . stage-in = 0 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . payload execution = 70408 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . stage-out = 3 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | . log creation = 0 s
[2025-11-26 07:46:26] 2025-11-26 12:45:25,750 | INFO     | ..............................
[2025-11-26 07:46:26] 2025-11-26 12:45:25,954 | INFO     | time since job start (70442s) is within the limit (172800.0s)
[2025-11-26 07:46:26] 2025-11-26 12:45:26,218 | INFO     | 
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | job summary report
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | --------------------------------------------------
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | PanDA job id: 6895365534
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | task id: 47556137
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | errors: (none)
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | pilot state: finished 
[2025-11-26 07:46:26] 2025-11-26 12:45:26,219 | INFO     | transexitcode: 0
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | exeerrorcode: 0
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | exeerrordiag: 
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | exitcode: 0
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | exitmsg: OK
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | cpuconsumptiontime: 542486 s
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | nevents: 1000
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | neventsw: 0
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | pid: 21532
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | pgrp: 21532
[2025-11-26 07:46:26] 2025-11-26 12:45:26,220 | INFO     | corecount: 8
[2025-11-26 07:46:26] 2025-11-26 12:45:26,221 | INFO     | event service: False
[2025-11-26 07:46:26] 2025-11-26 12:45:26,221 | INFO     | sizes: {0: 2284314, 1: 2284314, 5: 2284604, 11: 2284660, 70419: 2341202, 70423: 2350380, 70427: 2350570}
[2025-11-26 07:46:26] 2025-11-26 12:45:26,221 | INFO     | --------------------------------------------------
[2025-11-26 07:46:26] 2025-11-26 12:45:26,221 | INFO     | 
[2025-11-26 07:46:26] 2025-11-26 12:45:26,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 07:46:26] 2025-11-26 12:45:26,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:46:26] 2025-11-26 12:45:26,238 | INFO     | job 6895365534 has completed (purged errors)
[2025-11-26 07:46:26] 2025-11-26 12:45:26,238 | INFO     | overall cleanup function is called
[2025-11-26 07:46:26] 2025-11-26 12:45:27,250 | INFO     | --- collectZombieJob: --- 10, [21532]
[2025-11-26 07:46:26] 2025-11-26 12:45:27,251 | INFO     | zombie collector waiting for pid 21532
[2025-11-26 07:46:26] 2025-11-26 12:45:27,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:46:26] 2025-11-26 12:45:27,251 | INFO     | collected zombie processes
[2025-11-26 07:46:26] 2025-11-26 12:45:27,251 | INFO     | will attempt to kill all subprocesses of pid=21532
[2025-11-26 07:46:26] 2025-11-26 12:45:27,362 | INFO     | process IDs to be killed: [21532] (in reverse order)
[2025-11-26 07:46:26] 2025-11-26 12:45:27,400 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:46:26] 2025-11-26 12:45:27,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:46:26] 2025-11-26 12:45:27,404 | INFO     | did not find any defunct processes belonging to 21532
[2025-11-26 07:46:26] 2025-11-26 12:45:27,406 | INFO     | did not find any defunct processes belonging to 21532
[2025-11-26 07:46:26] 2025-11-26 12:45:27,407 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:46:26] 2025-11-26 12:45:27,407 | INFO     | ready for new job
[2025-11-26 07:46:26] 2025-11-26 12:45:27,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:46:26] 2025-11-26 12:45:27,412 | INFO     | ***************************************
[2025-11-26 07:46:26] 2025-11-26 12:45:27,412 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:46:26] 2025-11-26 12:45:27,412 | INFO     | ***************************************
[2025-11-26 07:46:26] 2025-11-26 12:45:27,412 | INFO     | 
[2025-11-26 07:46:26] 2025-11-26 12:45:27,413 | INFO     | architecture information:
[2025-11-26 07:46:26] 2025-11-26 12:45:27,413 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:46:26] 2025-11-26 12:45:27,423 | INFO     | cat /etc/os-release:
[2025-11-26 07:46:26] NAME="CentOS Linux"
[2025-11-26 07:46:26] VERSION="7 (Core)"
[2025-11-26 07:46:26] ID="centos"
[2025-11-26 07:46:26] ID_LIKE="rhel fedora"
[2025-11-26 07:46:26] VERSION_ID="7"
[2025-11-26 07:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:46:26] ANSI_COLOR="0;31"
[2025-11-26 07:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:46:26] HOME_URL="https://www.centos.org/"
[2025-11-26 07:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:46:26] 
[2025-11-26 07:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:46:26] 
[2025-11-26 07:46:26] 2025-11-26 12:45:27,424 | INFO     | ***************************************
[2025-11-26 07:46:26] 2025-11-26 12:45:27,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 07:46:26] 2025-11-26 12:45:27,940 | INFO     | sufficient remaining disk space (25051529216 B)
[2025-11-26 07:46:26] 2025-11-26 12:45:27,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:46:26] 2025-11-26 12:45:27,940 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:46:26] 2025-11-26 12:45:27,940 | INFO     | update_server=False
[2025-11-26 07:46:26] 2025-11-26 12:45:27,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:46:26] 2025-11-26 12:45:27,941 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 07:46:26] 2025-11-26 12:45:27,941 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:46:26] 2025-11-26 12:45:27,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:46:26] 2025-11-26 12:45:27,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:46:26] 2025-11-26 12:45:27,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:46:26] 2025-11-26 12:45:27,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:46:26] 2025-11-26 12:45:28,169 | INFO     | all payload control threads have been joined
[2025-11-26 07:46:26] 2025-11-26 12:45:28,609 | INFO     | all job control threads have been joined
[2025-11-26 07:46:26] 2025-11-26 12:45:28,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:46:26] 2025-11-26 12:45:28,927 | INFO     | aborting loop
[2025-11-26 07:46:26] 2025-11-26 12:45:28,946 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,024 | INFO     | all data control threads have been joined
[2025-11-26 07:46:26] 2025-11-26 12:45:29,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,110 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,172 | INFO     | [payload] control thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,391 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,427 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,612 | INFO     | [job] control thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,673 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,930 | INFO     | [job] validate thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,932 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,941 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:29,946 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:30,028 | INFO     | [data] control thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:30,251 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:30,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:46:26] 2025-11-26 12:45:31,842 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:45:31,948 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:46:26] 2025-11-26 12:46:20,339 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:46:26] 2025-11-26 12:46:21,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109490870080)>', '<ExcThread(monitor, started 140109038987008)>']
[2025-11-26 07:46:26] 2025-11-26 12:46:22,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:46:26] 2025-11-26 12:46:22,193 | INFO     | [monitor] control thread has ended
[2025-11-26 07:46:26] 2025-11-26 12:46:26,370 | INFO     | all workflow threads have been joined
[2025-11-26 07:46:26] 2025-11-26 12:46:26,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:46:26] 2025-11-26 12:46:26,370 | INFO     | traces error code: 0
[2025-11-26 07:46:26] 2025-11-26 12:46:26,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:46:26] 2025-11-26 12:46:26,456 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:46:26] 2025-11-26 12:46:26,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:46:26] 2025-11-26 12:46:26,461 [wrapper] pilotpid: 2290
[2025-11-26 07:46:26] 2025-11-26 12:46:26,464 [wrapper] Pilot exit status: 0
[2025-11-26 07:46:26] 2025-11-26 12:46:26,473 [wrapper] pandaids: 6895365534 6895365534
[2025-11-26 07:46:26] 2025-11-26 12:46:26,505 [wrapper] cleanup supervisor_pilot 24628 2291
[2025-11-26 07:46:26] 2025-11-26 12:46:26,508 [wrapper] Test setup, not cleaning
[2025-11-26 07:46:26] 2025-11-26 12:46:26,510 [wrapper] apfmon messages muted
[2025-11-26 07:46:26] 2025-11-26 12:46:26,513 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:46:26] 2025-11-26 12:46:26,516 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:46:26]  *** Error codes and diagnostics ***
[2025-11-26 07:46:26]     "exeErrorCode": 0,
[2025-11-26 07:46:26]     "exeErrorDiag": "",
[2025-11-26 07:46:26]     "pilotErrorCode": 0,
[2025-11-26 07:46:26]     "pilotErrorDiag": "",
[2025-11-26 07:46:26]  *** Listing of results directory ***
[2025-11-26 07:46:26] total 1714824
[2025-11-26 07:46:26] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-26 07:46:26] -rwx------ 1 boincer umatlas     36292 Nov 23 12:20 runpilot2-wrapper.sh
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:20 queuedata.json
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:46:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:25 run_atlas
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:25 job.xml
[2025-11-26 07:46:26] -rw-r--r-- 3 boincer umatlas 410584886 Nov 25 08:25 EVNT.47483658._000823.pool.root.1
[2025-11-26 07:46:26] -rw-r--r-- 3 boincer umatlas 410584886 Nov 25 08:25 ATLAS.root_0
[2025-11-26 07:46:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:25 start_atlas.sh
[2025-11-26 07:46:26] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:25 shared
[2025-11-26 07:46:26] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 08:25 input.tar.gz
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:25 boinc_lockfile
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 12:11 pandaJob.out
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas        57 Nov 25 12:11 setup.sh.local
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas    991543 Nov 25 12:11 agis_schedconf.cvmfs.json
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 07:36 init_data.xml
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas       533 Nov 26 07:36 boinc_task_state.xml
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas 906768088 Nov 26 07:44 HITS.47556137._008096.pool.root.1
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas        96 Nov 26 07:44 pilot_heartbeat.json
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas      1066 Nov 26 07:45 memory_monitor_summary.json
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas   1516240 Nov 26 07:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas   2319190 Nov 26 07:45 log.47556137._008096.job.log.tgz.1
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas      8652 Nov 26 07:45 heartbeat.json
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:45 wrapper_checkpoint.txt
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:45 boinc_mmap_file
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas      4552 Nov 26 07:46 pilotlog.txt
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas   9738290 Nov 26 07:46 log.47556137._008096.job.log.1
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas       353 Nov 26 07:46 output.list
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:46 runtime_log
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas  12072960 Nov 26 07:46 result.tar.gz
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas      9428 Nov 26 07:46 runtime_log.err
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas       793 Nov 26 07:46 2PgMDmbwSh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmteIKDmOBvtGo.diag
[2025-11-26 07:46:26] -rw-r--r-- 1 boincer umatlas     23390 Nov 26 07:46 stderr.txt
[2025-11-26 07:46:26] HITS file was successfully produced:
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas 906768088 Nov 26 07:44 shared/HITS.pool.root.1
[2025-11-26 07:46:26]  *** Contents of shared directory: ***
[2025-11-26 07:46:26] total 1298876
[2025-11-26 07:46:26] -rw-r--r-- 3 boincer umatlas 410584886 Nov 25 08:25 ATLAS.root_0
[2025-11-26 07:46:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:25 start_atlas.sh
[2025-11-26 07:46:26] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 08:25 input.tar.gz
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas 906768088 Nov 26 07:44 HITS.pool.root.1
[2025-11-26 07:46:26] -rw------- 1 boincer umatlas  12072960 Nov 26 07:46 result.tar.gz
07:46:28 (22700): run_atlas exited; CPU time 540978.725517
07:46:28 (22700): called boinc_finish(0)

</stderr_txt>
]]>

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