Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:29 (4501): wrapper (7.7.26015): starting
08:38:29 (4501): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:38:29] Arguments: --nthreads 8
[2025-11-25 08:38:29] Threads: 8
[2025-11-25 08:38:29] Checking for CVMFS
[2025-11-25 08:38:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:38:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:38:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:38:29] 2.11.2.0 2888 47494 75728 153284 1 82 15752483 20275200 1 130560 0 8606418 99.778 2675597 29392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:38:29] CVMFS is ok
[2025-11-25 08:38:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:38:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:38:29] Further information can be found at the LHC@home message board.
[2025-11-25 08:38:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:38:29] Checking for apptainer binary...
[2025-11-25 08:38:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:38:29] Running /usr/bin/apptainer --version
[2025-11-25 08:38:29] apptainer version 1.3.2-1.el7
[2025-11-25 08:38:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:38:31] c-204-6.aglt2.org
[2025-11-25 08:38:31] apptainer works
[2025-11-25 08:38:31] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:38:31] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:38:31] Starting ATLAS job with PandaID=6895381197
[2025-11-25 08:38:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:48:25 (13304): wrapper (7.7.26015): starting
17:48:25 (13304): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:48:25] Arguments: --nthreads 8
[2025-11-25 17:48:25] Threads: 8
[2025-11-25 17:48:25] This job has been restarted, cleaning up previous attempt
[2025-11-25 17:48:25] Checking for CVMFS
[2025-11-25 17:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:48:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:48:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:48:25] 2.11.2.0 2888 48044 79856 153300 3 56 16466450 20275201 1 130560 0 8793655 99.782 2702154 29437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 17:48:25] CVMFS is ok
[2025-11-25 17:48:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:48:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:48:25] Further information can be found at the LHC@home message board.
[2025-11-25 17:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:48:25] Checking for apptainer binary...
[2025-11-25 17:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:48:25] Running /usr/bin/apptainer --version
[2025-11-25 17:48:25] apptainer version 1.3.2-1.el7
[2025-11-25 17:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:48:27] c-204-6.aglt2.org
[2025-11-25 17:48:27] apptainer works
[2025-11-25 17:48:27] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:48:27] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:48:27] Starting ATLAS job with PandaID=6895381197
[2025-11-25 17:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:59:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:59:04] 2025-11-26 10:58:20,048 | INFO     | monitor loop #3216: job 0:6895381197 is in state 'finished'
[2025-11-26 05:59:04] 2025-11-26 10:58:20,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:59:04] 2025-11-26 10:58:20,873 | INFO     | time since job start (43775s) is within the limit (172800.0s)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,408 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 05:59:04] 2025-11-26 10:58:21,411 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 05:59:04] 2025-11-26 10:58:21,413 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895381197/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,414 | INFO     | extracted standard info from prmon json
[2025-11-26 05:59:04] 2025-11-26 10:58:21,414 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:59:04] 2025-11-26 10:58:21,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:59:04] 2025-11-26 10:58:21,428 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:59:04] 2025-11-26 10:58:21,429 | INFO     | sum of square deviations: 114296789254.64453
[2025-11-26 05:59:04] 2025-11-26 10:58:21,440 | INFO     | sum of deviations: 752126698647.5367
[2025-11-26 05:59:04] 2025-11-26 10:58:21,440 | INFO     | mean x: 1764132796.6610878
[2025-11-26 05:59:04] 2025-11-26 10:58:21,440 | INFO     | mean y: 3185259.4672245467
[2025-11-26 05:59:04] 2025-11-26 10:58:21,441 | INFO     | intersect: -11605639318.90677
[2025-11-26 05:59:04] 2025-11-26 10:58:21,441 | INFO     | chi2: 5.866731507349296
[2025-11-26 05:59:04] 2025-11-26 10:58:21,442 | INFO     | sum of square deviations: 111922414882.4438
[2025-11-26 05:59:04] 2025-11-26 10:58:21,453 | INFO     | sum of deviations: 1011970029930.7859
[2025-11-26 05:59:04] 2025-11-26 10:58:21,453 | INFO     | mean x: 1764132644.1657302
[2025-11-26 05:59:04] 2025-11-26 10:58:21,453 | INFO     | mean y: 3201943.179775281
[2025-11-26 05:59:04] 2025-11-26 10:58:21,453 | INFO     | intersect: -15947574017.054668
[2025-11-26 05:59:04] 2025-11-26 10:58:21,454 | INFO     | chi2: 2.785235373861462
[2025-11-26 05:59:04] 2025-11-26 10:58:21,454 | INFO     | current chi2=2.785235373861462 (change=52.524921749488996 %)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,455 | INFO     | sum of square deviations: 109581157410.21219
[2025-11-26 05:59:04] 2025-11-26 10:58:21,465 | INFO     | sum of deviations: 1096058950373.2084
[2025-11-26 05:59:04] 2025-11-26 10:58:21,465 | INFO     | mean x: 1764132491.6704385
[2025-11-26 05:59:04] 2025-11-26 10:58:21,465 | INFO     | mean y: 3207413.297029703
[2025-11-26 05:59:04] 2025-11-26 10:58:21,465 | INFO     | intersect: -17642099981.123466
[2025-11-26 05:59:04] 2025-11-26 10:58:21,466 | INFO     | chi2: 2.3500579529528034
[2025-11-26 05:59:04] 2025-11-26 10:58:21,466 | INFO     | current chi2=2.3500579529528034 (change=15.624439679054008 %)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,466 | INFO     | right removable region: 706
[2025-11-26 05:59:04] 2025-11-26 10:58:21,467 | INFO     | sum of square deviations: 111922125742.44383
[2025-11-26 05:59:04] 2025-11-26 10:58:21,478 | INFO     | sum of deviations: 537905817662.83704
[2025-11-26 05:59:04] 2025-11-26 10:58:21,478 | INFO     | mean x: 1764132949.1657302
[2025-11-26 05:59:04] 2025-11-26 10:58:21,478 | INFO     | mean y: 3198994.2556179776
[2025-11-26 05:59:04] 2025-11-26 10:58:21,478 | INFO     | intersect: -8475351338.773681
[2025-11-26 05:59:04] 2025-11-26 10:58:21,479 | INFO     | chi2: 3.6981257081346683
[2025-11-26 05:59:04] 2025-11-26 10:58:21,479 | INFO     | current chi2=3.6981257081346683 (change=36.964463031894326 %)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,480 | INFO     | sum of square deviations: 109580622318.55176
[2025-11-26 05:59:04] 2025-11-26 10:58:21,490 | INFO     | sum of deviations: 493992076838.24164
[2025-11-26 05:59:04] 2025-11-26 10:58:21,490 | INFO     | mean x: 1764133101.669024
[2025-11-26 05:59:04] 2025-11-26 10:58:21,490 | INFO     | mean y: 3201852.6548797735
[2025-11-26 05:59:04] 2025-11-26 10:58:21,490 | INFO     | intersect: -7949552532.871479
[2025-11-26 05:59:04] 2025-11-26 10:58:21,491 | INFO     | chi2: 3.6571701539172268
[2025-11-26 05:59:04] 2025-11-26 10:58:21,491 | INFO     | current chi2=3.6571701539172268 (change=1.10746787561474 %)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,491 | INFO     | left removable region: 20
[2025-11-26 05:59:04] 2025-11-26 10:58:21,492 | INFO     | sum of square deviations: 100103363258.22276
[2025-11-26 05:59:04] 2025-11-26 10:58:21,502 | INFO     | sum of deviations: 795371653112.8652
[2025-11-26 05:59:04] 2025-11-26 10:58:21,502 | INFO     | mean x: 1764133071.1822157
[2025-11-26 05:59:04] 2025-11-26 10:58:21,502 | INFO     | mean y: 3228303.8250728864
[2025-11-26 05:59:04] 2025-11-26 10:58:21,502 | INFO     | intersect: -14013697716.110796
[2025-11-26 05:59:04] 2025-11-26 10:58:21,503 | INFO     | chi2: 0.09129851354330157
[2025-11-26 05:59:04] 2025-11-26 10:58:21,503 | INFO     | current memory leak: 7.95 B/s (using 686 data points, chi2=0.09)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | could have reported an average CPU frequency of 2178 MHz (27 samples)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | ..............................
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | . Timing measurements:
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | . get job = 0 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | . initial setup = 2 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,504 | INFO     | . payload setup = 9 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,505 | INFO     | . stage-in = 0 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,505 | INFO     | . payload execution = 43733 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,505 | INFO     | . stage-out = 3 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,505 | INFO     | . log creation = 0 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,505 | INFO     | ..............................
[2025-11-26 05:59:04] 2025-11-26 10:58:21,592 | INFO     | 
[2025-11-26 05:59:04] 2025-11-26 10:58:21,593 | INFO     | job summary report
[2025-11-26 05:59:04] 2025-11-26 10:58:21,593 | INFO     | --------------------------------------------------
[2025-11-26 05:59:04] 2025-11-26 10:58:21,593 | INFO     | PanDA job id: 6895381197
[2025-11-26 05:59:04] 2025-11-26 10:58:21,593 | INFO     | task id: 47556137
[2025-11-26 05:59:04] 2025-11-26 10:58:21,593 | INFO     | errors: (none)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | pilot state: finished 
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | transexitcode: 0
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | exeerrorcode: 0
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | exeerrordiag: 
[2025-11-26 05:59:04] 2025-11-26 10:58:21,594 | INFO     | exitcode: 0
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | exitmsg: OK
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | cpuconsumptiontime: 339409 s
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | nevents: 1000
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | neventsw: 0
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | pid: 23510
[2025-11-26 05:59:04] 2025-11-26 10:58:21,595 | INFO     | pgrp: 23510
[2025-11-26 05:59:04] 2025-11-26 10:58:21,596 | INFO     | corecount: 8
[2025-11-26 05:59:04] 2025-11-26 10:58:21,596 | INFO     | event service: False
[2025-11-26 05:59:04] 2025-11-26 10:58:21,596 | INFO     | sizes: {0: 2284087, 1: 2284286, 7: 2284548, 11: 2284576, 43746: 2330026, 43751: 2339204, 43759: 2339394}
[2025-11-26 05:59:04] 2025-11-26 10:58:21,596 | INFO     | --------------------------------------------------
[2025-11-26 05:59:04] 2025-11-26 10:58:21,596 | INFO     | 
[2025-11-26 05:59:04] 2025-11-26 10:58:21,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 05:59:04] 2025-11-26 10:58:21,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:59:04] 2025-11-26 10:58:21,629 | INFO     | job 6895381197 has completed (purged errors)
[2025-11-26 05:59:04] 2025-11-26 10:58:21,630 | INFO     | overall cleanup function is called
[2025-11-26 05:59:04] 2025-11-26 10:58:21,998 | INFO     | PID=17017 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 05:59:04] 2025-11-26 10:58:22,646 | INFO     | --- collectZombieJob: --- 10, [23510]
[2025-11-26 05:59:04] 2025-11-26 10:58:22,646 | INFO     | zombie collector waiting for pid 23510
[2025-11-26 05:59:04] 2025-11-26 10:58:22,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:59:04] 2025-11-26 10:58:22,646 | INFO     | collected zombie processes
[2025-11-26 05:59:04] 2025-11-26 10:58:22,646 | INFO     | will attempt to kill all subprocesses of pid=23510
[2025-11-26 05:59:04] 2025-11-26 10:58:22,733 | INFO     | process IDs to be killed: [23510] (in reverse order)
[2025-11-26 05:59:04] 2025-11-26 10:58:22,788 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:59:04] 2025-11-26 10:58:22,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:59:04] 2025-11-26 10:58:22,793 | INFO     | did not find any defunct processes belonging to 23510
[2025-11-26 05:59:04] 2025-11-26 10:58:22,797 | INFO     | did not find any defunct processes belonging to 23510
[2025-11-26 05:59:04] 2025-11-26 10:58:22,800 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:59:04] 2025-11-26 10:58:22,800 | INFO     | ready for new job
[2025-11-26 05:59:04] 2025-11-26 10:58:22,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:59:04] 2025-11-26 10:58:22,803 | INFO     | ***************************************
[2025-11-26 05:59:04] 2025-11-26 10:58:22,803 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:59:04] 2025-11-26 10:58:22,803 | INFO     | ***************************************
[2025-11-26 05:59:04] 2025-11-26 10:58:22,803 | INFO     | 
[2025-11-26 05:59:04] 2025-11-26 10:58:22,804 | INFO     | architecture information:
[2025-11-26 05:59:04] 2025-11-26 10:58:22,805 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:59:04] 2025-11-26 10:58:22,823 | INFO     | cat /etc/os-release:
[2025-11-26 05:59:04] NAME="CentOS Linux"
[2025-11-26 05:59:04] VERSION="7 (Core)"
[2025-11-26 05:59:04] ID="centos"
[2025-11-26 05:59:04] ID_LIKE="rhel fedora"
[2025-11-26 05:59:04] VERSION_ID="7"
[2025-11-26 05:59:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:59:04] ANSI_COLOR="0;31"
[2025-11-26 05:59:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:59:04] HOME_URL="https://www.centos.org/"
[2025-11-26 05:59:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:59:04] 
[2025-11-26 05:59:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:59:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:59:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:59:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:59:04] 
[2025-11-26 05:59:04] 2025-11-26 10:58:22,824 | INFO     | ***************************************
[2025-11-26 05:59:04] 2025-11-26 10:58:23,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 05:59:04] 2025-11-26 10:58:23,348 | INFO     | sufficient remaining disk space (17486053376 B)
[2025-11-26 05:59:04] 2025-11-26 10:58:23,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:59:04] 2025-11-26 10:58:23,349 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:59:04] 2025-11-26 10:58:23,349 | INFO     | update_server=False
[2025-11-26 05:59:04] 2025-11-26 10:58:23,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:59:04] 2025-11-26 10:58:23,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:59:04] 2025-11-26 10:58:23,502 | INFO     | all data control threads have been joined
[2025-11-26 05:59:04] 2025-11-26 10:58:23,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:59:04] 2025-11-26 10:58:23,556 | INFO     | aborting loop
[2025-11-26 05:59:04] 2025-11-26 10:58:23,645 | INFO     | all job control threads have been joined
[2025-11-26 05:59:04] 2025-11-26 10:58:24,053 | INFO     | all payload control threads have been joined
[2025-11-26 05:59:04] 2025-11-26 10:58:24,355 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,356 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,508 | INFO     | [data] control thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,561 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,562 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,585 | INFO     | [job] validate thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,648 | INFO     | [job] control thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,694 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,718 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:24,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:59:04] 2025-11-26 10:58:24,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:59:04] 2025-11-26 10:58:24,889 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:25,025 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:25,059 | INFO     | [payload] control thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:25,201 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:25,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:26,809 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:28,891 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:59:04] 2025-11-26 10:58:54,125 | INFO     | PID=17017 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 05:59:04] 2025-11-26 10:58:54,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:59:04] 2025-11-26 10:58:54,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:59:04] 2025-11-26 10:58:54,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:59:04] 2025-11-26 10:58:57,374 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:59:04] 2025-11-26 10:58:59,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999956559680)>', '<ExcThread(monitor, started 139999005628160)>']
[2025-11-26 05:59:04] 2025-11-26 10:59:00,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:59:04] 2025-11-26 10:59:00,157 | INFO     | [monitor] control thread has ended
[2025-11-26 05:59:04] 2025-11-26 10:59:04,503 | INFO     | all workflow threads have been joined
[2025-11-26 05:59:04] 2025-11-26 10:59:04,503 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:59:04] 2025-11-26 10:59:04,510 | INFO     | traces error code: 0
[2025-11-26 05:59:04] 2025-11-26 10:59:04,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:59:04] 2025-11-26 10:59:04,634 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:59:04] 2025-11-26 10:59:04,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:59:04] 2025-11-26 10:59:04,643 [wrapper] pilotpid: 17017
[2025-11-26 05:59:04] 2025-11-26 10:59:04,648 [wrapper] Pilot exit status: 0
[2025-11-26 05:59:04] 2025-11-26 10:59:04,665 [wrapper] pandaids: 6895381197 6895381197
[2025-11-26 05:59:04] 2025-11-26 10:59:04,722 [wrapper] cleanup supervisor_pilot 30912 17018
[2025-11-26 05:59:04] 2025-11-26 10:59:04,727 [wrapper] Test setup, not cleaning
[2025-11-26 05:59:04] 2025-11-26 10:59:04,732 [wrapper] apfmon messages muted
[2025-11-26 05:59:04] 2025-11-26 10:59:04,738 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:59:04] 2025-11-26 10:59:04,743 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:59:04]  *** Error codes and diagnostics ***
[2025-11-26 05:59:04]     "exeErrorCode": 0,
[2025-11-26 05:59:04]     "exeErrorDiag": "",
[2025-11-26 05:59:04]     "pilotErrorCode": 0,
[2025-11-26 05:59:04]     "pilotErrorDiag": "",
[2025-11-26 05:59:04]  *** Listing of results directory ***
[2025-11-26 05:59:04] total 1702376
[2025-11-26 05:59:04] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 21:53 pilot3.tar.gz
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 22:08 queuedata.json
[2025-11-26 05:59:04] -rwx------ 1 boincer umatlas     36292 Nov 23 22:09 runpilot2-wrapper.sh
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:59:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:38 run_atlas
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:38 job.xml
[2025-11-26 05:59:04] -rw-r--r-- 3 boincer umatlas 408397052 Nov 25 08:38 EVNT.47483658._000994.pool.root.1
[2025-11-26 05:59:04] -rw-r--r-- 3 boincer umatlas 408397052 Nov 25 08:38 ATLAS.root_0
[2025-11-26 05:59:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:38 start_atlas.sh
[2025-11-26 05:59:04] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:38 shared
[2025-11-26 05:59:04] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 08:38 input.tar.gz
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:38 boinc_lockfile
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas      2782 Nov 25 17:48 pandaJob.out
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas        57 Nov 25 17:48 setup.sh.local
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas    991877 Nov 25 17:48 agis_schedconf.cvmfs.json
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas       533 Nov 26 05:46 boinc_task_state.xml
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas 906555671 Nov 26 05:57 HITS.47556137._009801.pool.root.1
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas      1061 Nov 26 05:58 memory_monitor_summary.json
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas   1516240 Nov 26 05:58 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas   1958045 Nov 26 05:58 log.47556137._009801.job.log.tgz.1
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas      8655 Nov 26 05:58 heartbeat.json
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas      5912 Nov 26 05:58 init_data.xml
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas        96 Nov 26 05:58 pilot_heartbeat.json
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 05:58 boinc_mmap_file
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas        29 Nov 26 05:58 wrapper_checkpoint.txt
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas      4746 Nov 26 05:59 pilotlog.txt
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas   6020903 Nov 26 05:59 log.47556137._009801.job.log.1
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas       353 Nov 26 05:59 output.list
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas       620 Nov 26 05:59 runtime_log
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas   7997440 Nov 26 05:59 result.tar.gz
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas      9423 Nov 26 05:59 runtime_log.err
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas       792 Nov 26 05:59 abbKDmk8bh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfNLKDmSrQGQo.diag
[2025-11-26 05:59:04] -rw-r--r-- 1 boincer umatlas     23554 Nov 26 05:59 stderr.txt
[2025-11-26 05:59:04] HITS file was successfully produced:
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas 906555671 Nov 26 05:57 shared/HITS.pool.root.1
[2025-11-26 05:59:04]  *** Contents of shared directory: ***
[2025-11-26 05:59:04] total 1292552
[2025-11-26 05:59:04] -rw-r--r-- 3 boincer umatlas 408397052 Nov 25 08:38 ATLAS.root_0
[2025-11-26 05:59:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:38 start_atlas.sh
[2025-11-26 05:59:04] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 08:38 input.tar.gz
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas 906555671 Nov 26 05:57 HITS.pool.root.1
[2025-11-26 05:59:04] -rw------- 1 boincer umatlas   7997440 Nov 26 05:59 result.tar.gz
05:59:06 (13304): run_atlas exited; CPU time 337288.076447
05:59:06 (13304): called boinc_finish(0)

</stderr_txt>
]]>

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