Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:58 (3960884): wrapper (7.7.26015): starting
08:11:58 (3960884): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:11:58] Arguments: --nthreads 8
[2025-11-25 08:11:58] Threads: 8
[2025-11-25 08:11:58] Checking for CVMFS
[2025-11-25 08:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:11:59] 2.13.3.0 9828 28609 319848 153283 3 285 29838513 32935936 22206 16776704 0 146895743 99.781 86831428 33709 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 08:11:59] CVMFS is ok
[2025-11-25 08:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:11:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:11:59] Further information can be found at the LHC@home message board.
[2025-11-25 08:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:11:59] Checking for apptainer binary...
[2025-11-25 08:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:11:59] Running /usr/bin/apptainer --version
[2025-11-25 08:11:59] apptainer version 1.4.4-1.el9
[2025-11-25 08:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:12:00] c-4-39.aglt2.org
[2025-11-25 08:12:00] apptainer works
[2025-11-25 08:12:00] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:12:00] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:12:00] Starting ATLAS job with PandaID=6895674646
[2025-11-25 08:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:28:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:28:03] 2025-11-26 04:27:19,491 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2509999999997
[2025-11-25 23:28:03] 2025-11-26 04:27:19,498 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895674646/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,499 | INFO     | extracted standard info from prmon json
[2025-11-25 23:28:03] 2025-11-26 04:27:19,499 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:28:03] 2025-11-26 04:27:19,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:28:03] 2025-11-26 04:27:19,519 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:28:03] 2025-11-26 04:27:19,520 | INFO     | sum of square deviations: 225287796925.09183
[2025-11-25 23:28:03] 2025-11-26 04:27:19,543 | INFO     | sum of deviations: 1924730802953.4766
[2025-11-25 23:28:03] 2025-11-26 04:27:19,543 | INFO     | mean x: 1764103789.7397108
[2025-11-25 23:28:03] 2025-11-26 04:27:19,543 | INFO     | mean y: 2918219.5917686317
[2025-11-25 23:28:03] 2025-11-26 04:27:19,543 | INFO     | intersect: -15068581213.854967
[2025-11-25 23:28:03] 2025-11-26 04:27:19,545 | INFO     | chi2: 6.741970716943725
[2025-11-25 23:28:03] 2025-11-26 04:27:19,546 | INFO     | sum of square deviations: 221549999187.37518
[2025-11-25 23:28:03] 2025-11-26 04:27:19,568 | INFO     | sum of deviations: 2227004728124.809
[2025-11-25 23:28:03] 2025-11-26 04:27:19,568 | INFO     | mean x: 1764103637.2494407
[2025-11-25 23:28:03] 2025-11-26 04:27:19,568 | INFO     | mean y: 2930555.1174496645
[2025-11-25 23:28:03] 2025-11-26 04:27:19,568 | INFO     | intersect: -17729712890.906757
[2025-11-25 23:28:03] 2025-11-26 04:27:19,570 | INFO     | chi2: 3.659365396239781
[2025-11-25 23:28:03] 2025-11-26 04:27:19,570 | INFO     | current chi2=3.659365396239781 (change=45.72261509467595 %)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,571 | INFO     | sum of square deviations: 217853783624.48602
[2025-11-25 23:28:03] 2025-11-26 04:27:19,592 | INFO     | sum of deviations: 2328226582058.94
[2025-11-25 23:28:03] 2025-11-26 04:27:19,592 | INFO     | mean x: 1764103484.7592802
[2025-11-25 23:28:03] 2025-11-26 04:27:19,593 | INFO     | mean y: 2934723.158605174
[2025-11-25 23:28:03] 2025-11-26 04:27:19,593 | INFO     | intersect: -18850227055.289043
[2025-11-25 23:28:03] 2025-11-26 04:27:19,594 | INFO     | chi2: 3.049607498974054
[2025-11-25 23:28:03] 2025-11-26 04:27:19,594 | INFO     | current chi2=3.049607498974054 (change=16.662941008631993 %)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,594 | INFO     | right removable region: 888
[2025-11-25 23:28:03] 2025-11-26 04:27:19,596 | INFO     | sum of square deviations: 221549045147.37543
[2025-11-25 23:28:03] 2025-11-26 04:27:19,618 | INFO     | sum of deviations: 1620810515370.1582
[2025-11-25 23:28:03] 2025-11-26 04:27:19,618 | INFO     | mean x: 1764103942.2494407
[2025-11-25 23:28:03] 2025-11-26 04:27:19,618 | INFO     | mean y: 2930609.317673378
[2025-11-25 23:28:03] 2025-11-26 04:27:19,618 | INFO     | intersect: -12902917023.209196
[2025-11-25 23:28:03] 2025-11-26 04:27:19,620 | INFO     | chi2: 3.8847426333314257
[2025-11-25 23:28:03] 2025-11-26 04:27:19,620 | INFO     | current chi2=3.8847426333314257 (change=42.37971660766186 %)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,621 | INFO     | sum of square deviations: 217852421259.55917
[2025-11-25 23:28:03] 2025-11-26 04:27:19,642 | INFO     | sum of deviations: 1551134258779.8967
[2025-11-25 23:28:03] 2025-11-26 04:27:19,642 | INFO     | mean x: 1764104094.7480314
[2025-11-25 23:28:03] 2025-11-26 04:27:19,643 | INFO     | mean y: 2933483.655793026
[2025-11-25 23:28:03] 2025-11-26 04:27:19,643 | INFO     | intersect: -12557690270.703785
[2025-11-25 23:28:03] 2025-11-26 04:27:19,644 | INFO     | chi2: 3.8273203944247247
[2025-11-25 23:28:03] 2025-11-26 04:27:19,644 | INFO     | current chi2=3.8273203944247247 (change=1.478147829254201 %)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,644 | INFO     | left removable region: 20
[2025-11-25 23:28:03] 2025-11-26 04:27:19,646 | INFO     | sum of square deviations: 202775611440.97098
[2025-11-25 23:28:03] 2025-11-26 04:27:19,666 | INFO     | sum of deviations: 1852664184119.0671
[2025-11-25 23:28:03] 2025-11-26 04:27:19,666 | INFO     | mean x: 1764104064.279954
[2025-11-25 23:28:03] 2025-11-26 04:27:19,666 | INFO     | mean y: 2954303.699308756
[2025-11-25 23:28:03] 2025-11-26 04:27:19,666 | INFO     | intersect: -16114824327.197674
[2025-11-25 23:28:03] 2025-11-26 04:27:19,669 | INFO     | chi2: 0.08080778999201357
[2025-11-25 23:28:03] 2025-11-26 04:27:19,669 | INFO     | current memory leak: 9.14 B/s (using 868 data points, chi2=0.08)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,670 | INFO     | could have reported an average CPU frequency of 2600 MHz (33 samples)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | ..............................
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . Timing measurements:
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . get job = 0 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . initial setup = 3 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . payload setup = 14 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . stage-in = 0 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . payload execution = 54831 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,671 | INFO     | . stage-out = 3 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,672 | INFO     | . log creation = 0 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,672 | INFO     | ..............................
[2025-11-25 23:28:03] 2025-11-26 04:27:19,783 | INFO     | 
[2025-11-25 23:28:03] 2025-11-26 04:27:19,784 | INFO     | job summary report
[2025-11-25 23:28:03] 2025-11-26 04:27:19,784 | INFO     | --------------------------------------------------
[2025-11-25 23:28:03] 2025-11-26 04:27:19,784 | INFO     | PanDA job id: 6895674646
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | task id: 47556149
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | errors: (none)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | pilot state: finished 
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | transexitcode: 0
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | exeerrorcode: 0
[2025-11-25 23:28:03] 2025-11-26 04:27:19,785 | INFO     | exeerrordiag: 
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | exitcode: 0
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | exitmsg: OK
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | cpuconsumptiontime: 289297 s
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | nevents: 1000
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | neventsw: 0
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | pid: 3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:19,783 | INFO     | time since job start (54897s) is within the limit (172800.0s)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,786 | INFO     | pgrp: 3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | corecount: 8
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | event service: False
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284582, 23: 2284582, 54849: 2335910, 54854: 2344932, 54856: 2345116, 54866: 2345426}
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | --------------------------------------------------
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | 
[2025-11-25 23:28:03] 2025-11-26 04:27:19,787 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 23:28:03] 2025-11-26 04:27:19,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | job 6895674646 has completed (purged errors)
[2025-11-25 23:28:03] 2025-11-26 04:27:19,812 | INFO     | overall cleanup function is called
[2025-11-25 23:28:03] 2025-11-26 04:27:20,829 | INFO     | --- collectZombieJob: --- 10, [3973635]
[2025-11-25 23:28:03] 2025-11-26 04:27:20,830 | INFO     | zombie collector waiting for pid 3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:20,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:28:03] 2025-11-26 04:27:20,835 | INFO     | collected zombie processes
[2025-11-25 23:28:03] 2025-11-26 04:27:20,835 | INFO     | will attempt to kill all subprocesses of pid=3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:21,827 | INFO     | PID=3964601 has CPU usage=20.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 23:28:03] 2025-11-26 04:27:21,827 | INFO     | .. there are 38 such processes running
[2025-11-25 23:28:03] 2025-11-26 04:27:21,859 | INFO     | process IDs to be killed: [3973635] (in reverse order)
[2025-11-25 23:28:03] 2025-11-26 04:27:22,000 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:28:03] 2025-11-26 04:27:22,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:28:03] 2025-11-26 04:27:22,016 | INFO     | did not find any defunct processes belonging to 3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:22,032 | INFO     | did not find any defunct processes belonging to 3973635
[2025-11-25 23:28:03] 2025-11-26 04:27:22,033 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:28:03] 2025-11-26 04:27:22,033 | INFO     | ready for new job
[2025-11-25 23:28:03] 2025-11-26 04:27:22,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:28:03] 2025-11-26 04:27:22,038 | INFO     | ***************************************
[2025-11-25 23:28:03] 2025-11-26 04:27:22,038 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:28:03] 2025-11-26 04:27:22,038 | INFO     | ***************************************
[2025-11-25 23:28:03] 2025-11-26 04:27:22,038 | INFO     | 
[2025-11-25 23:28:03] 2025-11-26 04:27:22,040 | INFO     | architecture information:
[2025-11-25 23:28:03] 2025-11-26 04:27:22,041 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:28:03] 2025-11-26 04:27:22,058 | INFO     | cat /etc/os-release:
[2025-11-25 23:28:03] NAME="CentOS Linux"
[2025-11-25 23:28:03] VERSION="7 (Core)"
[2025-11-25 23:28:03] ID="centos"
[2025-11-25 23:28:03] ID_LIKE="rhel fedora"
[2025-11-25 23:28:03] VERSION_ID="7"
[2025-11-25 23:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:28:03] ANSI_COLOR="0;31"
[2025-11-25 23:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:28:03] HOME_URL="https://www.centos.org/"
[2025-11-25 23:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:28:03] 
[2025-11-25 23:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:28:03] 
[2025-11-25 23:28:03] 2025-11-26 04:27:22,059 | INFO     | ***************************************
[2025-11-25 23:28:03] 2025-11-26 04:27:22,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 23:28:03] 2025-11-26 04:27:22,635 | INFO     | sufficient remaining disk space (73020735488 B)
[2025-11-25 23:28:03] 2025-11-26 04:27:22,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:28:03] 2025-11-26 04:27:22,635 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | INFO     | update_server=False
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:28:03] 2025-11-26 04:27:22,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:28:03] 2025-11-26 04:27:22,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:28:03] 2025-11-26 04:27:22,804 | INFO     | aborting loop
[2025-11-25 23:28:03] 2025-11-26 04:27:23,045 | INFO     | all data control threads have been joined
[2025-11-25 23:28:03] 2025-11-26 04:27:23,254 | INFO     | all job control threads have been joined
[2025-11-25 23:28:03] 2025-11-26 04:27:23,641 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:23,721 | INFO     | [job] validate thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:23,807 | INFO     | all payload control threads have been joined
[2025-11-25 23:28:03] 2025-11-26 04:27:23,809 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:23,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:28:03] 2025-11-26 04:27:24,009 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,051 | INFO     | [data] control thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,185 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,193 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,260 | INFO     | [job] control thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,426 [wrapper] supervise_pilot (15 min periods counter: 62)
[2025-11-25 23:28:03] 2025-11-26 04:27:24,629 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,813 | INFO     | [payload] control thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:24,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:28:03] 2025-11-26 04:27:25,210 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:25,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:28:03] 2025-11-26 04:27:25,828 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:25,844 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:29,621 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:33,396 | INFO     | job.realtimelogging is not enabled
[2025-11-25 23:28:03] 2025-11-26 04:27:34,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:28:03] 2025-11-26 04:27:58,068 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:28:03] 2025-11-26 04:27:58,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578996193088)>', '<ExcThread(monitor, started 140578339665664)>']
[2025-11-25 23:28:03] 2025-11-26 04:27:58,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:28:03] 2025-11-26 04:27:58,931 | INFO     | [monitor] control thread has ended
[2025-11-25 23:28:03] 2025-11-26 04:28:03,106 | INFO     | all workflow threads have been joined
[2025-11-25 23:28:03] 2025-11-26 04:28:03,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:28:03] 2025-11-26 04:28:03,107 | INFO     | traces error code: 0
[2025-11-25 23:28:03] 2025-11-26 04:28:03,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:28:03] 2025-11-26 04:28:03,273 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:28:03] 2025-11-26 04:28:03,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:28:03] 2025-11-26 04:28:03,278 [wrapper] pilotpid: 3964601
[2025-11-25 23:28:03] 2025-11-26 04:28:03,280 [wrapper] Pilot exit status: 0
[2025-11-25 23:28:03] 2025-11-26 04:28:03,293 [wrapper] pandaids: 6895674646
[2025-11-25 23:28:03] 2025-11-26 04:28:03,381 [wrapper] cleanup supervisor_pilot 3257631 3964602
[2025-11-25 23:28:03] 2025-11-26 04:28:03,385 [wrapper] Test setup, not cleaning
[2025-11-25 23:28:03] 2025-11-26 04:28:03,389 [wrapper] apfmon messages muted
[2025-11-25 23:28:03] 2025-11-26 04:28:03,392 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:28:03] 2025-11-26 04:28:03,396 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:28:03]  *** Error codes and diagnostics ***
[2025-11-25 23:28:03]     "exeErrorCode": 0,
[2025-11-25 23:28:03]     "exeErrorDiag": "",
[2025-11-25 23:28:03]     "pilotErrorCode": 0,
[2025-11-25 23:28:03]     "pilotErrorDiag": "",
[2025-11-25 23:28:03]  *** Listing of results directory ***
[2025-11-25 23:28:03] total 1312832
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 10:13 pilot3.tar.gz
[2025-11-25 23:28:03] -rwx------. 1 boincer umatlas     36292 Nov 24 10:17 runpilot2-wrapper.sh
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 10:17 queuedata.json
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas       100 Nov 25 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:28:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 08:11 run_atlas
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas       105 Nov 25 08:11 job.xml
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas 409870083 Nov 25 08:11 EVNT.47483658._001365.pool.root.1
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:11 start_atlas.sh
[2025-11-25 23:28:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 08:11 shared
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 08:11 input.tar.gz
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas         0 Nov 25 08:11 boinc_lockfile
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 08:12 pandaJob.out
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas        57 Nov 25 08:12 setup.sh.local
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas    991909 Nov 25 08:12 agis_schedconf.cvmfs.json
[2025-11-25 23:28:03] drwx------. 5 boincer umatlas      4096 Nov 25 08:12 pilot3
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:17 boinc_task_state.xml
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas      6659 Nov 25 23:19 init_data.xml
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas 911970206 Nov 25 23:26 HITS.47556149._003518.pool.root.1
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas      1056 Nov 25 23:27 memory_monitor_summary.json
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas   2082809 Nov 25 23:27 log.47556149._003518.job.log.tgz.1
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas      8615 Nov 25 23:27 heartbeat.json
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas        95 Nov 25 23:27 pilot_heartbeat.json
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:27 boinc_mmap_file
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:27 wrapper_checkpoint.txt
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas      4624 Nov 25 23:28 pilotlog.txt
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas   7210711 Nov 25 23:28 log.47556149._003518.job.log.1
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas       353 Nov 25 23:28 output.list
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:28 runtime_log
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas   9308160 Nov 25 23:28 result.tar.gz
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 23:28 runtime_log.err
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas       658 Nov 25 23:28 cg4KDmZUnh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLjLKDmeYX8an.diag
[2025-11-25 23:28:03] -rw-r--r--. 1 boincer umatlas     21335 Nov 25 23:28 stderr.txt
[2025-11-25 23:28:03] HITS file was successfully produced:
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas 911970206 Nov 25 23:26 shared/HITS.pool.root.1
[2025-11-25 23:28:03]  *** Contents of shared directory: ***
[2025-11-25 23:28:03] total 1300552
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas 409870083 Nov 25 08:11 ATLAS.root_0
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:11 start_atlas.sh
[2025-11-25 23:28:03] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 08:11 input.tar.gz
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas 911970206 Nov 25 23:26 HITS.pool.root.1
[2025-11-25 23:28:03] -rw-------. 1 boincer umatlas   9308160 Nov 25 23:28 result.tar.gz
23:28:05 (3960884): run_atlas exited; CPU time 291169.281341
23:28:05 (3960884): called boinc_finish(0)

</stderr_txt>
]]>

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