Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:39:50 (4025866): wrapper (7.7.26015): starting
16:39:50 (4025866): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 16:39:50] Arguments: --nthreads 12
[2025-11-25 16:39:50] Threads: 12
[2025-11-25 16:39:50] Checking for CVMFS
[2025-11-25 16:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:39:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:39:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:39:50] 2.13.3.0 3964151 183 44360 153287 1 81 2808217 4096001 0 130560 0 122985 99.981 9332 294 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 16:39:50] CVMFS is ok
[2025-11-25 16:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:39:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 16:39:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 16:39:50] Further information can be found at the LHC@home message board.
[2025-11-25 16:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:39:50] Checking for apptainer binary...
[2025-11-25 16:39:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:39:50] Running /usr/bin/apptainer --version
[2025-11-25 16:39:50] apptainer version 1.4.2
[2025-11-25 16:39:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:39:51] matisse
[2025-11-25 16:39:51] apptainer works
[2025-11-25 16:39:51] Set ATHENA_PROC_NUMBER=12
[2025-11-25 16:39:51] Set ATHENA_CORE_NUMBER=12
[2025-11-25 16:39:51] Starting ATLAS job with PandaID=6895674608
[2025-11-25 16:39:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:40:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:40:40] 2025-11-25 18:40:06,930 | INFO     | time since job start (10810s) is within the limit (172800.0s)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,376 | INFO     | monitor loop #817: job 0:6895674608 is in state 'finished'
[2025-11-25 19:40:40] 2025-11-25 18:40:08,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,430 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 19:40:40] 2025-11-25 18:40:08,432 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3412.7713125
[2025-11-25 19:40:40] 2025-11-25 18:40:08,433 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6895674608/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,433 | INFO     | extracted standard info from prmon json
[2025-11-25 19:40:40] 2025-11-25 18:40:08,433 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:40:40] 2025-11-25 18:40:08,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | sum of square deviations: 1719513300.2824807
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | sum of deviations: 62625802230.34459
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | mean x: 1764090581.316384
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | mean y: 3496746.2259887005
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | intersect: -64245839297.74895
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | chi2: 2.342784471592951
[2025-11-25 19:40:40] 2025-11-25 18:40:08,435 | INFO     | sum of square deviations: 1577890514.7674408
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | sum of deviations: 88961340236.63953
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | mean x: 1764090428.8255813
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | mean y: 3524627.854651163
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | intersect: -99455751778.33
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | chi2: 1.42897165377343
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | current chi2=1.42897165377343 (change=39.00541551729612 %)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | sum of square deviations: 1444246650.538926
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | sum of deviations: 84074885944.24547
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | mean x: 1764090276.3233533
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | mean y: 3519052.347305389
[2025-11-25 19:40:40] 2025-11-25 18:40:08,436 | INFO     | intersect: -102690635524.29227
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | chi2: 1.4290610705578266
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | current chi2=1.4290610705578266 (change=-0.0062574218432141105 %)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | right removable region: 166
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | sum of square deviations: 1577856354.7674408
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | sum of deviations: 24350059239.75582
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | mean x: 1764090733.8255813
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | mean y: 3537444.1918604653
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | intersect: -27220559187.39818
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | chi2: 0.952921875888648
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | current chi2=0.952921875888648 (change=59.32524363879196 %)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,437 | INFO     | sum of square deviations: 1444199559.2215555
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | sum of deviations: 17654092394.347305
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | mean x: 1764090886.3353293
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | mean y: 3545068.958083832
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | intersect: -21560942539.7881
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | chi2: 0.9434257280885896
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | current chi2=0.9434257280885896 (change=0.9965295204502178 %)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | left removable region: 20
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | sum of square deviations: 965020003.2602711
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | sum of deviations: 32378371045.84931
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | mean x: 1764090855.8630137
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | mean y: 3581556.842465753
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | intersect: -59185231210.5105
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | chi2: 0.014376168597486269
[2025-11-25 19:40:40] 2025-11-25 18:40:08,438 | INFO     | current memory leak: 33.55 B/s (using 146 data points, chi2=0.01)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | could have reported an average CPU frequency of 3888 MHz (9 samples)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | ..............................
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . Timing measurements:
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . get job = 0 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . initial setup = 1 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . payload setup = 2 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . stage-in = 0 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . payload execution = 10786 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . stage-out = 1 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | . log creation = 0 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,439 | INFO     | ..............................
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | 
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | job summary report
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | --------------------------------------------------
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | PanDA job id: 6895674608
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | task id: 47556149
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | errors: (none)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | pilot state: finished 
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | transexitcode: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | exeerrorcode: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:08,470 | INFO     | exeerrordiag: 
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | exitcode: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | exitmsg: OK
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | cpuconsumptiontime: 126292 s
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | nevents: 1000
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | neventsw: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | pid: 4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | pgrp: 4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | corecount: 12
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | event service: False
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | sizes: {0: 2284321, 1: 2284583, 10: 2284611, 10792: 2314837, 10793: 2323873, 10797: 2323929, 10800: 2324367}
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | --------------------------------------------------
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | 
[2025-11-25 19:40:40] 2025-11-25 18:40:08,471 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-25 19:40:40] 2025-11-25 18:40:08,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | job 6895674608 has completed (purged errors)
[2025-11-25 19:40:40] 2025-11-25 18:40:08,482 | INFO     | overall cleanup function is called
[2025-11-25 19:40:40] 2025-11-25 18:40:09,494 | INFO     | --- collectZombieJob: --- 10, [4036212]
[2025-11-25 19:40:40] 2025-11-25 18:40:09,494 | INFO     | zombie collector waiting for pid 4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:09,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:40:40] 2025-11-25 18:40:09,494 | INFO     | collected zombie processes
[2025-11-25 19:40:40] 2025-11-25 18:40:09,494 | INFO     | will attempt to kill all subprocesses of pid=4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:09,559 | INFO     | process IDs to be killed: [4036212] (in reverse order)
[2025-11-25 19:40:40] 2025-11-25 18:40:09,586 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:40:40] 2025-11-25 18:40:09,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:40:40] 2025-11-25 18:40:09,588 | INFO     | did not find any defunct processes belonging to 4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:09,590 | INFO     | did not find any defunct processes belonging to 4036212
[2025-11-25 19:40:40] 2025-11-25 18:40:09,591 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:40:40] 2025-11-25 18:40:09,591 | INFO     | ready for new job
[2025-11-25 19:40:40] 2025-11-25 18:40:09,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:40:40] 2025-11-25 18:40:09,592 | INFO     | ***************************************
[2025-11-25 19:40:40] 2025-11-25 18:40:09,592 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:40:40] 2025-11-25 18:40:09,592 | INFO     | ***************************************
[2025-11-25 19:40:40] 2025-11-25 18:40:09,592 | INFO     | 
[2025-11-25 19:40:40] 2025-11-25 18:40:09,593 | INFO     | architecture information:
[2025-11-25 19:40:40] 2025-11-25 18:40:09,593 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:40:40] 2025-11-25 18:40:09,600 | INFO     | cat /etc/os-release:
[2025-11-25 19:40:40] NAME="CentOS Linux"
[2025-11-25 19:40:40] VERSION="7 (Core)"
[2025-11-25 19:40:40] ID="centos"
[2025-11-25 19:40:40] ID_LIKE="rhel fedora"
[2025-11-25 19:40:40] VERSION_ID="7"
[2025-11-25 19:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:40:40] ANSI_COLOR="0;31"
[2025-11-25 19:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:40:40] HOME_URL="https://www.centos.org/"
[2025-11-25 19:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:40:40] 
[2025-11-25 19:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:40:40] 
[2025-11-25 19:40:40] 2025-11-25 18:40:09,600 | INFO     | ***************************************
[2025-11-25 19:40:40] 2025-11-25 18:40:10,102 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | INFO     | sufficient remaining disk space (479153094656 B)
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | INFO     | update_server=False
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | INFO     | aborting loop
[2025-11-25 19:40:40] 2025-11-25 18:40:10,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:40:40] 2025-11-25 18:40:10,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:40:40] 2025-11-25 18:40:10,341 | INFO     | all data control threads have been joined
[2025-11-25 19:40:40] 2025-11-25 18:40:10,541 | INFO     | all payload control threads have been joined
[2025-11-25 19:40:40] 2025-11-25 18:40:11,115 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,115 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,116 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:40:40] 2025-11-25 18:40:11,155 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,184 | INFO     | all job control threads have been joined
[2025-11-25 19:40:40] 2025-11-25 18:40:11,261 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,346 | INFO     | [data] control thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,546 | INFO     | [payload] control thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:11,878 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,115 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,189 | INFO     | [job] control thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,325 | INFO     | [job] validate thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,479 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,501 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:12,619 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:13,223 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:40:40] 2025-11-25 18:40:15,132 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:20,858 | INFO     | job.realtimelogging is not enabled
[2025-11-25 19:40:40] 2025-11-25 18:40:21,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:40:40] 2025-11-25 18:40:22,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034957920064)>', '<ExcThread(monitor, started 140034676066048)>']
[2025-11-25 19:40:40] 2025-11-25 18:40:27,389 | INFO     | all workflow threads have been joined
[2025-11-25 19:40:40] 2025-11-25 18:40:27,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:40:40] 2025-11-25 18:40:27,390 | INFO     | traces error code: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:27,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:40:40] 2025-11-25 18:40:40,070 | INFO     | PID=4029654 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:40:40] 2025-11-25 18:40:40,071 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:40:40] 2025-11-25 18:40:40,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:40:40] 2025-11-25 18:40:40,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:40:40] 2025-11-25 18:40:40,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:40:40] 2025-11-25 18:40:40,071 | INFO     | [monitor] control thread has ended
[2025-11-25 19:40:40] 2025-11-25 18:40:40,111 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:40:40] 2025-11-25 18:40:40,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:40:40] 2025-11-25 18:40:40,114 [wrapper] pilotpid: 4029654
[2025-11-25 19:40:40] 2025-11-25 18:40:40,115 [wrapper] Pilot exit status: 0
[2025-11-25 19:40:40] 2025-11-25 18:40:40,119 [wrapper] pandaids: 6895674608
[2025-11-25 19:40:40] 2025-11-25 18:40:40,138 [wrapper] cleanup supervisor_pilot 4071605 4029655
[2025-11-25 19:40:40] 2025-11-25 18:40:40,139 [wrapper] Test setup, not cleaning
[2025-11-25 19:40:40] 2025-11-25 18:40:40,141 [wrapper] apfmon messages muted
[2025-11-25 19:40:40] 2025-11-25 18:40:40,142 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:40:40] 2025-11-25 18:40:40,143 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:40:40]  *** Error codes and diagnostics ***
[2025-11-25 19:40:40]     "exeErrorCode": 0,
[2025-11-25 19:40:40]     "exeErrorDiag": "",
[2025-11-25 19:40:40]     "pilotErrorCode": 0,
[2025-11-25 19:40:40]     "pilotErrorDiag": "",
[2025-11-25 19:40:40]  *** Listing of results directory ***
[2025-11-25 19:40:40] total 1310888
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc      5112 Nov 24 15:31 queuedata.json
[2025-11-25 19:40:40] -rwx------ 1 boinc boinc     36292 Nov 24 15:33 runpilot2-wrapper.sh
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc       100 Nov 25 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:40:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 16:39 run_atlas
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc       105 Nov 25 16:39 job.xml
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc 409513180 Nov 25 16:39 EVNT.47483658._001361.pool.root.1
[2025-11-25 19:40:40] drwxrwx--x 2 boinc boinc      4096 Nov 25 16:39 shared
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc    590108 Nov 25 16:39 input.tar.gz
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 16:39 start_atlas.sh
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc         0 Nov 25 16:39 boinc_setup_complete
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc      9642 Nov 25 16:39 init_data.xml
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc         0 Nov 25 16:39 boinc_lockfile
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc      2785 Nov 25 16:39 pandaJob.out
[2025-11-25 19:40:40] -rw------- 1 boinc boinc    991909 Nov 25 16:39 agis_schedconf.cvmfs.json
[2025-11-25 19:40:40] drwx------ 5 boinc boinc      4096 Nov 25 16:39 pilot3
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc       532 Nov 25 19:36 boinc_task_state.xml
[2025-11-25 19:40:40] -rw------- 1 boinc boinc 921949866 Nov 25 19:39 HITS.47556149._003480.pool.root.1
[2025-11-25 19:40:40] -rw------- 1 boinc boinc      1047 Nov 25 19:39 memory_monitor_summary.json
[2025-11-25 19:40:40] -rw------- 1 boinc boinc   1516240 Nov 25 19:40 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:40:40] -rw------- 1 boinc boinc   1927758 Nov 25 19:40 log.47556149._003480.job.log.tgz.1
[2025-11-25 19:40:40] -rw------- 1 boinc boinc      8601 Nov 25 19:40 heartbeat.json
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc        29 Nov 25 19:40 wrapper_checkpoint.txt
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc      8192 Nov 25 19:40 boinc_mmap_file
[2025-11-25 19:40:40] -rw------- 1 boinc boinc       747 Nov 25 19:40 pilotlog.txt
[2025-11-25 19:40:40] -rw------- 1 boinc boinc        95 Nov 25 19:40 pilot_heartbeat.json
[2025-11-25 19:40:40] -rw------- 1 boinc boinc   1558748 Nov 25 19:40 log.47556149._003480.job.log.1
[2025-11-25 19:40:40] -rw------- 1 boinc boinc       353 Nov 25 19:40 output.list
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc       620 Nov 25 19:40 runtime_log
[2025-11-25 19:40:40] -rw------- 1 boinc boinc   3502080 Nov 25 19:40 result.tar.gz
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc      8895 Nov 25 19:40 runtime_log.err
[2025-11-25 19:40:40] -rw------- 1 boinc boinc       659 Nov 25 19:40 LHYKDmeomh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyiLKDmeXnOsn.diag
[2025-11-25 19:40:40] -rw-r--r-- 1 boinc boinc     21381 Nov 25 19:40 stderr.txt
[2025-11-25 19:40:40] HITS file was successfully produced:
[2025-11-25 19:40:40] -rw------- 1 boinc boinc 921949866 Nov 25 19:39 shared/HITS.pool.root.1
[2025-11-25 19:40:40]  *** Contents of shared directory: ***
[2025-11-25 19:40:40] total 1304284
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc 409513180 Nov 25 16:39 ATLAS.root_0
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc    590108 Nov 25 16:39 input.tar.gz
[2025-11-25 19:40:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 16:39 start_atlas.sh
[2025-11-25 19:40:40] -rw------- 1 boinc boinc 921949866 Nov 25 19:39 HITS.pool.root.1
[2025-11-25 19:40:40] -rw------- 1 boinc boinc   3502080 Nov 25 19:40 result.tar.gz
19:40:41 (4025866): run_atlas exited; CPU time 126117.972945
19:40:41 (4025866): called boinc_finish(0)

</stderr_txt>
]]>

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