Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:40:45 (4073948): wrapper (7.7.26015): starting
19:40:45 (4073948): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 19:40:45] Arguments: --nthreads 12
[2025-11-25 19:40:45] Threads: 12
[2025-11-25 19:40:45] Checking for CVMFS
[2025-11-25 19:40:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:40:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:40:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:40:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:40:46] 2.13.3.0 3964151 363 46052 153293 0 81 2854400 4096000 0 130560 0 240503 99.979 18759 439 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 19:40:46] CVMFS is ok
[2025-11-25 19:40:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:40:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 19:40:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 19:40:46] Further information can be found at the LHC@home message board.
[2025-11-25 19:40:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:40:46] Checking for apptainer binary...
[2025-11-25 19:40:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:40:46] Running /usr/bin/apptainer --version
[2025-11-25 19:40:46] apptainer version 1.4.2
[2025-11-25 19:40:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:40:46] matisse
[2025-11-25 19:40:46] apptainer works
[2025-11-25 19:40:46] Set ATHENA_PROC_NUMBER=12
[2025-11-25 19:40:46] Set ATHENA_CORE_NUMBER=12
[2025-11-25 19:40:46] Starting ATLAS job with PandaID=6895674636
[2025-11-25 19:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:38:14]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:38:14] 2025-11-25 21:37:11,420 | INFO     | monitor loop #799: job 0:6895674636 is in state 'finished'
[2025-11-25 22:38:14] 2025-11-25 21:37:11,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:38:14] 2025-11-25 21:37:11,542 | INFO     | time since job start (10580s) is within the limit (172800.0s)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,497 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:38:14] 2025-11-25 21:37:12,498 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3365.992875
[2025-11-25 22:38:14] 2025-11-25 21:37:12,499 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6895674636/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,500 | INFO     | extracted standard info from prmon json
[2025-11-25 22:38:14] 2025-11-25 21:37:12,500 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:38:14] 2025-11-25 21:37:12,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:38:14] 2025-11-25 21:37:12,501 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:38:14] 2025-11-25 21:37:12,501 | INFO     | sum of square deviations: 1605492326.6705148
[2025-11-25 22:38:14] 2025-11-25 21:37:12,501 | INFO     | sum of deviations: 66490798454.04625
[2025-11-25 22:38:14] 2025-11-25 21:37:12,501 | INFO     | mean x: 1764101315.1387284
[2025-11-25 22:38:14] 2025-11-25 21:37:12,501 | INFO     | mean y: 3508269.6647398844
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | intersect: -73056015621.46324
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | chi2: 2.216966102252104
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | sum of square deviations: 1470278506.57143
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | sum of deviations: 86166526486.64288
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | mean x: 1764101162.642857
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | mean y: 3529960.0773809524
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | intersect: -103382644071.97725
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | chi2: 1.4227626372132383
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | current chi2=1.4227626372132383 (change=35.82388852188919 %)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,502 | INFO     | sum of square deviations: 1342868415.7546065
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | sum of deviations: 81493909619.57054
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | mean x: 1764101010.1411042
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | mean y: 3524367.4969325154
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | intersect: -107053493724.21707
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | chi2: 1.4224915232889819
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | current chi2=1.4224915232889819 (change=0.019055457120199144 %)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | right removable region: 162
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | sum of square deviations: 1470263866.57143
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | sum of deviations: 29072511645.28572
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | mean x: 1764101467.642857
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | mean y: 3549929.738095238
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | intersect: -34879209299.80794
[2025-11-25 22:38:14] 2025-11-25 21:37:12,503 | INFO     | chi2: 0.8310289126075552
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | current chi2=0.8310289126075552 (change=62.51503747561341 %)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | sum of square deviations: 1342869879.0306773
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | sum of deviations: 22561220166.926388
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | mean x: 1764101620.1349692
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | mean y: 3557709.2760736197
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | intersect: -29634671333.008793
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | chi2: 0.8237167072746204
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | current chi2=0.8237167072746204 (change=0.8798978256954899 %)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | left removable region: 20
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | sum of square deviations: 887851874.9577459
[2025-11-25 22:38:14] 2025-11-25 21:37:12,504 | INFO     | sum of deviations: 31419834086.9155
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | mean x: 1764101589.633803
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | mean y: 3588007.767605634
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | intersect: -62425495966.84907
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | chi2: 0.013233849833530101
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | current memory leak: 35.39 B/s (using 142 data points, chi2=0.01)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | could have reported an average CPU frequency of 3834 MHz (9 samples)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | ..............................
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . Timing measurements:
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . get job = 0 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . initial setup = 1 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . payload setup = 2 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . stage-in = 0 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . payload execution = 10551 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . stage-out = 0 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | . log creation = 0 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,505 | INFO     | ..............................
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | 
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | job summary report
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | --------------------------------------------------
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | PanDA job id: 6895674636
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | task id: 47556149
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | errors: (none)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | pilot state: finished 
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | transexitcode: 0
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | exeerrorcode: 0
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | exeerrordiag: 
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | exitcode: 0
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | exitmsg: OK
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | cpuconsumptiontime: 124297 s
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | nevents: 1000
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | neventsw: 0
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | pid: 4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | pgrp: 4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | corecount: 12
[2025-11-25 22:38:14] 2025-11-25 21:37:12,535 | INFO     | event service: False
[2025-11-25 22:38:14] 2025-11-25 21:37:12,536 | INFO     | sizes: {0: 2284321, 2: 2284583, 11: 2284611, 10557: 2314754, 10558: 2314753, 10560: 2323817, 10562: 2324001, 10569: 2324311}
[2025-11-25 22:38:14] 2025-11-25 21:37:12,536 | INFO     | --------------------------------------------------
[2025-11-25 22:38:14] 2025-11-25 21:37:12,536 | INFO     | 
[2025-11-25 22:38:14] 2025-11-25 21:37:12,536 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | job 6895674636 has completed (purged errors)
[2025-11-25 22:38:14] 2025-11-25 21:37:12,546 | INFO     | overall cleanup function is called
[2025-11-25 22:38:14] 2025-11-25 21:37:12,627 | INFO     | PID=4077736 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:38:14] 2025-11-25 21:37:13,560 | INFO     | --- collectZombieJob: --- 10, [4084279]
[2025-11-25 22:38:14] 2025-11-25 21:37:13,560 | INFO     | zombie collector waiting for pid 4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:13,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:38:14] 2025-11-25 21:37:13,560 | INFO     | collected zombie processes
[2025-11-25 22:38:14] 2025-11-25 21:37:13,560 | INFO     | will attempt to kill all subprocesses of pid=4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:13,620 | INFO     | process IDs to be killed: [4084279] (in reverse order)
[2025-11-25 22:38:14] 2025-11-25 21:37:13,647 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:38:14] 2025-11-25 21:37:13,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:38:14] 2025-11-25 21:37:13,649 | INFO     | did not find any defunct processes belonging to 4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:13,651 | INFO     | did not find any defunct processes belonging to 4084279
[2025-11-25 22:38:14] 2025-11-25 21:37:13,651 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:38:14] 2025-11-25 21:37:13,651 | INFO     | ready for new job
[2025-11-25 22:38:14] 2025-11-25 21:37:13,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:38:14] 2025-11-25 21:37:13,652 | INFO     | ***************************************
[2025-11-25 22:38:14] 2025-11-25 21:37:13,652 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:38:14] 2025-11-25 21:37:13,652 | INFO     | ***************************************
[2025-11-25 22:38:14] 2025-11-25 21:37:13,652 | INFO     | 
[2025-11-25 22:38:14] 2025-11-25 21:37:13,653 | INFO     | architecture information:
[2025-11-25 22:38:14] 2025-11-25 21:37:13,653 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:38:14] 2025-11-25 21:37:13,661 | INFO     | cat /etc/os-release:
[2025-11-25 22:38:14] NAME="CentOS Linux"
[2025-11-25 22:38:14] VERSION="7 (Core)"
[2025-11-25 22:38:14] ID="centos"
[2025-11-25 22:38:14] ID_LIKE="rhel fedora"
[2025-11-25 22:38:14] VERSION_ID="7"
[2025-11-25 22:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:38:14] ANSI_COLOR="0;31"
[2025-11-25 22:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:38:14] HOME_URL="https://www.centos.org/"
[2025-11-25 22:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:38:14] 
[2025-11-25 22:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:38:14] 
[2025-11-25 22:38:14] 2025-11-25 21:37:13,661 | INFO     | ***************************************
[2025-11-25 22:38:14] 2025-11-25 21:37:14,163 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | INFO     | sufficient remaining disk space (474942013440 B)
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | INFO     | update_server=False
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:38:14] 2025-11-25 21:37:14,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:38:14] 2025-11-25 21:37:14,245 | INFO     | all data control threads have been joined
[2025-11-25 22:38:14] 2025-11-25 21:37:14,406 | INFO     | all job control threads have been joined
[2025-11-25 22:38:14] 2025-11-25 21:37:14,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:38:14] 2025-11-25 21:37:14,928 | INFO     | aborting loop
[2025-11-25 22:38:14] 2025-11-25 21:37:15,177 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,177 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,223 | INFO     | all payload control threads have been joined
[2025-11-25 22:38:14] 2025-11-25 21:37:15,250 | INFO     | [data] control thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,411 | INFO     | [job] control thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,447 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,869 | INFO     | [job] validate thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,933 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:15,994 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,068 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:38:14] 2025-11-25 21:37:16,177 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,229 | INFO     | [payload] control thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,306 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,346 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:16,725 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:20,134 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:38:14] 2025-11-25 21:37:44,766 | INFO     | PID=4077736 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:38:14] 2025-11-25 21:37:44,767 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:38:14] 2025-11-25 21:37:44,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:38:14] 2025-11-25 21:37:44,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:38:14] 2025-11-25 21:38:07,993 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:38:14] 2025-11-25 21:38:09,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138542461327168)>', '<ExcThread(monitor, started 138541602428672)>']
[2025-11-25 22:38:14] 2025-11-25 21:38:09,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:38:14] 2025-11-25 21:38:09,885 | INFO     | [monitor] control thread has ended
[2025-11-25 22:38:14] 2025-11-25 21:38:14,315 | INFO     | all workflow threads have been joined
[2025-11-25 22:38:14] 2025-11-25 21:38:14,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:38:14] 2025-11-25 21:38:14,315 | INFO     | traces error code: 0
[2025-11-25 22:38:14] 2025-11-25 21:38:14,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:38:14] 2025-11-25 21:38:14,357 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:38:14] 2025-11-25 21:38:14,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:38:14] 2025-11-25 21:38:14,360 [wrapper] pilotpid: 4077736
[2025-11-25 22:38:14] 2025-11-25 21:38:14,361 [wrapper] Pilot exit status: 0
[2025-11-25 22:38:14] 2025-11-25 21:38:14,366 [wrapper] pandaids: 6895674636
[2025-11-25 22:38:14] 2025-11-25 21:38:14,384 [wrapper] cleanup supervisor_pilot 4110188 4077737
[2025-11-25 22:38:14] 2025-11-25 21:38:14,386 [wrapper] Test setup, not cleaning
[2025-11-25 22:38:14] 2025-11-25 21:38:14,387 [wrapper] apfmon messages muted
[2025-11-25 22:38:14] 2025-11-25 21:38:14,388 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:38:14] 2025-11-25 21:38:14,390 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:38:14]  *** Error codes and diagnostics ***
[2025-11-25 22:38:14]     "exeErrorCode": 0,
[2025-11-25 22:38:14]     "exeErrorDiag": "",
[2025-11-25 22:38:14]     "pilotErrorCode": 0,
[2025-11-25 22:38:14]     "pilotErrorDiag": "",
[2025-11-25 22:38:14]  *** Listing of results directory ***
[2025-11-25 22:38:14] total 1318288
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-25 22:38:14] -rwx------ 1 boinc boinc     36292 Nov 24 16:01 runpilot2-wrapper.sh
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc      5112 Nov 24 16:01 queuedata.json
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc       100 Nov 25 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:38:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 19:40 run_atlas
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc       105 Nov 25 19:40 job.xml
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc 409329181 Nov 25 19:40 EVNT.47483658._001364.pool.root.1
[2025-11-25 22:38:14] drwxrwx--x 2 boinc boinc      4096 Nov 25 19:40 shared
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc    590106 Nov 25 19:40 input.tar.gz
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:40 start_atlas.sh
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:40 boinc_setup_complete
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc      9642 Nov 25 19:40 init_data.xml
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:40 boinc_lockfile
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc      2785 Nov 25 19:40 pandaJob.out
[2025-11-25 22:38:14] -rw------- 1 boinc boinc    991543 Nov 25 19:40 agis_schedconf.cvmfs.json
[2025-11-25 22:38:14] -rw------- 1 boinc boinc   1516240 Nov 25 19:40 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:38:14] drwx------ 5 boinc boinc      4096 Nov 25 19:40 pilot3
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc       532 Nov 25 22:33 boinc_task_state.xml
[2025-11-25 22:38:14] -rw------- 1 boinc boinc 929798453 Nov 25 22:36 HITS.47556149._003508.pool.root.1
[2025-11-25 22:38:14] -rw------- 1 boinc boinc      1031 Nov 25 22:36 memory_monitor_summary.json
[2025-11-25 22:38:14] -rw------- 1 boinc boinc   1916116 Nov 25 22:37 log.47556149._003508.job.log.tgz.1
[2025-11-25 22:38:14] -rw------- 1 boinc boinc      8558 Nov 25 22:37 heartbeat.json
[2025-11-25 22:38:14] -rw------- 1 boinc boinc        95 Nov 25 22:37 pilot_heartbeat.json
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc        29 Nov 25 22:38 wrapper_checkpoint.txt
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc      8192 Nov 25 22:38 boinc_mmap_file
[2025-11-25 22:38:14] -rw------- 1 boinc boinc      4756 Nov 25 22:38 pilotlog.txt
[2025-11-25 22:38:14] -rw------- 1 boinc boinc   1523468 Nov 25 22:38 log.47556149._003508.job.log.1
[2025-11-25 22:38:14] -rw------- 1 boinc boinc       353 Nov 25 22:38 output.list
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc       620 Nov 25 22:38 runtime_log
[2025-11-25 22:38:14] -rw------- 1 boinc boinc   3461120 Nov 25 22:38 result.tar.gz
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc      8895 Nov 25 22:38 runtime_log.err
[2025-11-25 22:38:14] -rw------- 1 boinc boinc       656 Nov 25 22:38 JNPKDm5Enh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmy5IKDmPO80Co.diag
[2025-11-25 22:38:14] -rw-r--r-- 1 boinc boinc     21533 Nov 25 22:38 stderr.txt
[2025-11-25 22:38:14] HITS file was successfully produced:
[2025-11-25 22:38:14] -rw------- 1 boinc boinc 929798453 Nov 25 22:36 shared/HITS.pool.root.1
[2025-11-25 22:38:14]  *** Contents of shared directory: ***
[2025-11-25 22:38:14] total 1311728
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc 409329181 Nov 25 19:40 ATLAS.root_0
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc    590106 Nov 25 19:40 input.tar.gz
[2025-11-25 22:38:14] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:40 start_atlas.sh
[2025-11-25 22:38:14] -rw------- 1 boinc boinc 929798453 Nov 25 22:36 HITS.pool.root.1
[2025-11-25 22:38:14] -rw------- 1 boinc boinc   3461120 Nov 25 22:38 result.tar.gz
22:38:16 (4073948): run_atlas exited; CPU time 124165.181342
22:38:16 (4073948): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN