Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:23 (1315278): wrapper (7.7.26015): starting
06:57:23 (1315278): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 06:57:23] Arguments: --nthreads 12
[2025-11-27 06:57:23] Threads: 12
[2025-11-27 06:57:23] Checking for CVMFS
[2025-11-27 06:57:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:57:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:57:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:57:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:57:26] 2.13.3.0 4183 2282 161872 153349 1 443 45724976 46080001 23392 130560 0 10645873 99.842 9056729 31903 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-27 06:57:26] CVMFS is ok
[2025-11-27 06:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:57:26] Further information can be found at the LHC@home message board.
[2025-11-27 06:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:57:26] Checking for apptainer binary...
[2025-11-27 06:57:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:57:26] Running /usr/bin/apptainer --version
[2025-11-27 06:57:26] apptainer version 1.4.3-1.el9
[2025-11-27 06:57:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:57:26] mff2103.farm.particle.cz
[2025-11-27 06:57:26] apptainer works
[2025-11-27 06:57:26] Set ATHENA_PROC_NUMBER=12
[2025-11-27 06:57:26] Set ATHENA_CORE_NUMBER=12
[2025-11-27 06:57:26] Starting ATLAS job with PandaID=6895379003
[2025-11-27 06:57:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:00:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:00:44] 2025-11-27 12:59:52,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:00:44] 2025-11-27 12:59:52,320 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:00:44] 2025-11-27 12:59:52,321 | INFO     | sum of square deviations: 21526521758.720207
[2025-11-27 14:00:44] 2025-11-27 12:59:52,325 | INFO     | sum of deviations: 915519581462.5474
[2025-11-27 14:00:44] 2025-11-27 12:59:52,325 | INFO     | mean x: 1764235826.5085158
[2025-11-27 14:00:44] 2025-11-27 12:59:52,325 | INFO     | mean y: 3345435.700729927
[2025-11-27 14:00:44] 2025-11-27 12:59:52,325 | INFO     | intersect: -75029326520.78975
[2025-11-27 14:00:44] 2025-11-27 12:59:52,326 | INFO     | chi2: 16.55445852999519
[2025-11-27 14:00:44] 2025-11-27 12:59:52,326 | INFO     | sum of square deviations: 20750538154.70197
[2025-11-27 14:00:44] 2025-11-27 12:59:52,330 | INFO     | sum of deviations: 1051962146218.4075
[2025-11-27 14:00:44] 2025-11-27 12:59:52,330 | INFO     | mean x: 1764235674.0270936
[2025-11-27 14:00:44] 2025-11-27 12:59:52,330 | INFO     | mean y: 3372209.963054187
[2025-11-27 14:00:44] 2025-11-27 12:59:52,331 | INFO     | intersect: -89435712803.07216
[2025-11-27 14:00:44] 2025-11-27 12:59:52,331 | INFO     | chi2: 14.188590703546836
[2025-11-27 14:00:44] 2025-11-27 12:59:52,331 | INFO     | current chi2=14.188590703546836 (change=14.291423800794298 %)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,331 | INFO     | right removable region: 405
[2025-11-27 14:00:44] 2025-11-27 12:59:52,332 | INFO     | sum of square deviations: 20750159954.701977
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | sum of deviations: 714913535324.7189
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | mean x: 1764235979.0270936
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | mean y: 3384837.3891625614
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | intersect: -60780540860.85692
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | chi2: 11.414416841400346
[2025-11-27 14:00:44] 2025-11-27 12:59:52,336 | INFO     | current chi2=11.414416841400346 (change=31.0492891040897 %)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,337 | INFO     | sum of square deviations: 19992682225.396584
[2025-11-27 14:00:44] 2025-11-27 12:59:52,341 | INFO     | sum of deviations: 539958552075.61096
[2025-11-27 14:00:44] 2025-11-27 12:59:52,341 | INFO     | mean x: 1764236131.5461347
[2025-11-27 14:00:44] 2025-11-27 12:59:52,341 | INFO     | mean y: 3420053.4264339153
[2025-11-27 14:00:44] 2025-11-27 12:59:52,341 | INFO     | intersect: -47644733224.32775
[2025-11-27 14:00:44] 2025-11-27 12:59:52,342 | INFO     | chi2: 7.783723162433019
[2025-11-27 14:00:44] 2025-11-27 12:59:52,342 | INFO     | current chi2=7.783723162433019 (change=31.807964694251567 %)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,342 | INFO     | sum of square deviations: 19253856008.29286
[2025-11-27 14:00:44] 2025-11-27 12:59:52,346 | INFO     | sum of deviations: 353635626597.43414
[2025-11-27 14:00:44] 2025-11-27 12:59:52,346 | INFO     | mean x: 1764236284.0656567
[2025-11-27 14:00:44] 2025-11-27 12:59:52,346 | INFO     | mean y: 3458507.2525252528
[2025-11-27 14:00:44] 2025-11-27 12:59:52,346 | INFO     | intersect: -32400274205.44501
[2025-11-27 14:00:44] 2025-11-27 12:59:52,347 | INFO     | chi2: 3.8136385342340002
[2025-11-27 14:00:44] 2025-11-27 12:59:52,347 | INFO     | current chi2=3.8136385342340002 (change=51.00495669424681 %)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,347 | INFO     | sum of square deviations: 18533545005.524323
[2025-11-27 14:00:44] 2025-11-27 12:59:52,351 | INFO     | sum of deviations: 275920576487.04364
[2025-11-27 14:00:44] 2025-11-27 12:59:52,351 | INFO     | mean x: 1764236436.5754476
[2025-11-27 14:00:44] 2025-11-27 12:59:52,351 | INFO     | mean y: 3474903.6086956523
[2025-11-27 14:00:44] 2025-11-27 12:59:52,351 | INFO     | intersect: -26261825906.04467
[2025-11-27 14:00:44] 2025-11-27 12:59:52,352 | INFO     | chi2: 3.0643764608742243
[2025-11-27 14:00:44] 2025-11-27 12:59:52,352 | INFO     | current chi2=3.0643764608742243 (change=19.646908500474105 %)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,352 | INFO     | left removable region: 40
[2025-11-27 14:00:44] 2025-11-27 12:59:52,352 | INFO     | sum of square deviations: 15076507111.189075
[2025-11-27 14:00:44] 2025-11-27 12:59:52,356 | INFO     | sum of deviations: 332671111691.2604
[2025-11-27 14:00:44] 2025-11-27 12:59:52,356 | INFO     | mean x: 1764236863.6054795
[2025-11-27 14:00:44] 2025-11-27 12:59:52,356 | INFO     | mean y: 3531889.3698630137
[2025-11-27 14:00:44] 2025-11-27 12:59:52,356 | INFO     | intersect: -38925288584.35643
[2025-11-27 14:00:44] 2025-11-27 12:59:52,356 | INFO     | chi2: 0.17066716984786992
[2025-11-27 14:00:44] 2025-11-27 12:59:52,357 | INFO     | current memory leak: 22.07 B/s (using 365 data points, chi2=0.17)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,357 | INFO     | could have reported an average CPU frequency of 2759 MHz (17 samples)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | ..............................
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . Timing measurements:
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . get job = 0 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . initial setup = 6 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . payload setup = 64 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . stage-in = 0 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . payload execution = 25095 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . stage-out = 2 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | . log creation = 0 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,358 | INFO     | ..............................
[2025-11-27 14:00:44] 2025-11-27 12:59:52,540 | INFO     | time since job start (25256s) is within the limit (172800.0s)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,929 | INFO     | 
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | job summary report
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | --------------------------------------------------
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | PanDA job id: 6895379003
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | task id: 47556137
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | errors: (none)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | pilot state: finished 
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | transexitcode: 0
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | exeerrorcode: 0
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | exeerrordiag: 
[2025-11-27 14:00:44] 2025-11-27 12:59:52,930 | INFO     | exitcode: 0
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | exitmsg: OK
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | cpuconsumptiontime: 223090 s
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | nevents: 1000
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | neventsw: 0
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | pid: 1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | pgrp: 1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | corecount: 12
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | event service: False
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | sizes: {0: 2284088, 1: 2284172, 2: 2284343, 12: 2284371, 23: 2284399, 34: 2284427, 42: 2284845, 45: 2284901, 25163: 2322313, 25166: 2331309, 25167: 2331365, 25174:
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | --------------------------------------------------
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | 
[2025-11-27 14:00:44] 2025-11-27 12:59:52,931 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-11-27 14:00:44] 2025-11-27 12:59:52,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,956 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,956 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | job 6895379003 has completed (purged errors)
[2025-11-27 14:00:44] 2025-11-27 12:59:52,958 | INFO     | overall cleanup function is called
[2025-11-27 14:00:44] 2025-11-27 12:59:53,983 | INFO     | --- collectZombieJob: --- 10, [1342597]
[2025-11-27 14:00:44] 2025-11-27 12:59:53,983 | INFO     | zombie collector waiting for pid 1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:53,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:00:44] 2025-11-27 12:59:53,983 | INFO     | collected zombie processes
[2025-11-27 14:00:44] 2025-11-27 12:59:53,984 | INFO     | will attempt to kill all subprocesses of pid=1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:54,391 | INFO     | process IDs to be killed: [1342597] (in reverse order)
[2025-11-27 14:00:44] 2025-11-27 12:59:54,525 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:00:44] 2025-11-27 12:59:54,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:00:44] 2025-11-27 12:59:54,540 | INFO     | did not find any defunct processes belonging to 1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:54,554 | INFO     | did not find any defunct processes belonging to 1342597
[2025-11-27 14:00:44] 2025-11-27 12:59:54,555 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:00:44] 2025-11-27 12:59:54,555 | INFO     | ready for new job
[2025-11-27 14:00:44] 2025-11-27 12:59:54,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:00:44] 2025-11-27 12:59:54,558 | INFO     | ***************************************
[2025-11-27 14:00:44] 2025-11-27 12:59:54,558 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:00:44] 2025-11-27 12:59:54,558 | INFO     | ***************************************
[2025-11-27 14:00:44] 2025-11-27 12:59:54,558 | INFO     | 
[2025-11-27 14:00:44] 2025-11-27 12:59:54,564 | INFO     | architecture information:
[2025-11-27 14:00:44] 2025-11-27 12:59:54,565 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:00:44] 2025-11-27 12:59:54,586 | INFO     | cat /etc/os-release:
[2025-11-27 14:00:44] NAME="CentOS Linux"
[2025-11-27 14:00:44] VERSION="7 (Core)"
[2025-11-27 14:00:44] ID="centos"
[2025-11-27 14:00:44] ID_LIKE="rhel fedora"
[2025-11-27 14:00:44] VERSION_ID="7"
[2025-11-27 14:00:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:00:44] ANSI_COLOR="0;31"
[2025-11-27 14:00:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:00:44] HOME_URL="https://www.centos.org/"
[2025-11-27 14:00:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:00:44] 
[2025-11-27 14:00:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:00:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:00:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:00:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:00:44] 
[2025-11-27 14:00:44] 2025-11-27 12:59:54,587 | INFO     | ***************************************
[2025-11-27 14:00:44] 2025-11-27 12:59:55,089 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-11-27 14:00:44] 2025-11-27 12:59:55,110 | INFO     | sufficient remaining disk space (1669162074112 B)
[2025-11-27 14:00:44] 2025-11-27 12:59:55,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:00:44] 2025-11-27 12:59:55,110 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:00:44] 2025-11-27 12:59:55,110 | INFO     | update_server=False
[2025-11-27 14:00:44] 2025-11-27 12:59:55,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:00:44] 2025-11-27 12:59:55,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:00:44] 2025-11-27 12:59:55,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:00:44] 2025-11-27 12:59:55,111 | INFO     | aborting loop
[2025-11-27 14:00:44] 2025-11-27 12:59:55,207 | INFO     | all data control threads have been joined
[2025-11-27 14:00:44] 2025-11-27 12:59:55,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:00:44] 2025-11-27 12:59:56,115 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,117 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,213 | INFO     | [data] control thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,301 | INFO     | all job control threads have been joined
[2025-11-27 14:00:44] 2025-11-27 12:59:56,406 | INFO     | all payload control threads have been joined
[2025-11-27 14:00:44] 2025-11-27 12:59:56,631 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,870 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:56,962 | INFO     | [job] validate thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,117 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,187 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,218 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,306 | INFO     | [job] control thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,379 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,411 | INFO     | [payload] control thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:57,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:00:44] 2025-11-27 12:59:57,467 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:58,469 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:00:44] 2025-11-27 12:59:59,449 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:00:44] 2025-11-27 13:00:26,075 | INFO     | PID=1320973 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:00:44] 2025-11-27 13:00:26,075 | INFO     | .. there are 12 such processes running
[2025-11-27 14:00:44] 2025-11-27 13:00:26,076 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:00:44] 2025-11-27 13:00:26,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:00:44] 2025-11-27 13:00:26,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:00:44] 2025-11-27 13:00:38,314 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:00:44] 2025-11-27 13:00:39,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716730894144)>', '<ExcThread(monitor, started 140716013516544)>']
[2025-11-27 14:00:44] 2025-11-27 13:00:40,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:00:44] 2025-11-27 13:00:40,150 | INFO     | [monitor] control thread has ended
[2025-11-27 14:00:44] 2025-11-27 13:00:44,346 | INFO     | all workflow threads have been joined
[2025-11-27 14:00:44] 2025-11-27 13:00:44,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:00:44] 2025-11-27 13:00:44,346 | INFO     | traces error code: 0
[2025-11-27 14:00:44] 2025-11-27 13:00:44,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:00:44] 2025-11-27 13:00:44,562 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:00:44] 2025-11-27 13:00:44,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:00:44] 2025-11-27 13:00:44,568 [wrapper] pilotpid: 1320973
[2025-11-27 14:00:44] 2025-11-27 13:00:44,572 [wrapper] Pilot exit status: 0
[2025-11-27 14:00:44] 2025-11-27 13:00:44,585 [wrapper] pandaids: 6895379003
[2025-11-27 14:00:44] 2025-11-27 13:00:44,672 [wrapper] cleanup supervisor_pilot 2014190 1320974
[2025-11-27 14:00:44] 2025-11-27 13:00:44,676 [wrapper] Test setup, not cleaning
[2025-11-27 14:00:44] 2025-11-27 13:00:44,680 [wrapper] apfmon messages muted
[2025-11-27 14:00:44] 2025-11-27 13:00:44,683 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:00:44] 2025-11-27 13:00:44,687 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:00:44]  *** Error codes and diagnostics ***
[2025-11-27 14:00:44]     "exeErrorCode": 0,
[2025-11-27 14:00:44]     "exeErrorDiag": "",
[2025-11-27 14:00:44]     "pilotErrorCode": 0,
[2025-11-27 14:00:44]     "pilotErrorDiag": "",
[2025-11-27 14:00:44]  *** Listing of results directory ***
[2025-11-27 14:00:44] total 1314504
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc    576529 Nov 24 02:13 pilot3.tar.gz
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc      5112 Nov 24 02:59 queuedata.json
[2025-11-27 14:00:44] -rwx------ 1 boinc boinc     36292 Nov 24 03:01 runpilot2-wrapper.sh
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:00:44] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:57 run_atlas
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:57 job.xml
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc 410317000 Nov 27 06:57 EVNT.47483658._000974.pool.root.1
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc      6665 Nov 27 06:57 init_data.xml
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc    590107 Nov 27 06:57 input.tar.gz
[2025-11-27 14:00:44] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:57 shared
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:57 start_atlas.sh
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:57 boinc_lockfile
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc      2785 Nov 27 06:57 pandaJob.out
[2025-11-27 14:00:44] -rw------- 1 boinc boinc    991578 Nov 27 06:58 agis_schedconf.cvmfs.json
[2025-11-27 14:00:44] drwx------ 5 boinc boinc      4096 Nov 27 06:58 pilot3
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc       533 Nov 27 13:49 boinc_task_state.xml
[2025-11-27 14:00:44] -rw------- 1 boinc boinc 920503332 Nov 27 13:59 HITS.47556137._009605.pool.root.1
[2025-11-27 14:00:44] -rw------- 1 boinc boinc      1039 Nov 27 13:59 memory_monitor_summary.json
[2025-11-27 14:00:44] -rw------- 1 boinc boinc   1516240 Nov 27 13:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:00:44] -rw------- 1 boinc boinc   2162824 Nov 27 13:59 log.47556137._009605.job.log.tgz.1
[2025-11-27 14:00:44] -rw------- 1 boinc boinc      8611 Nov 27 13:59 heartbeat.json
[2025-11-27 14:00:44] -rw------- 1 boinc boinc        95 Nov 27 14:00 pilot_heartbeat.json
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc        29 Nov 27 14:00 wrapper_checkpoint.txt
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc      8192 Nov 27 14:00 boinc_mmap_file
[2025-11-27 14:00:44] -rw------- 1 boinc boinc      4827 Nov 27 14:00 pilotlog.txt
[2025-11-27 14:00:44] -rw------- 1 boinc boinc   3491434 Nov 27 14:00 log.47556137._009605.job.log.1
[2025-11-27 14:00:44] -rw------- 1 boinc boinc       353 Nov 27 14:00 output.list
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc       620 Nov 27 14:00 runtime_log
[2025-11-27 14:00:44] -rw------- 1 boinc boinc   5672960 Nov 27 14:00 result.tar.gz
[2025-11-27 14:00:44] -rw------- 1 boinc boinc       671 Nov 27 14:00 XaLLDmO4ah8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmKLKDmUtw7ym.diag
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc      8881 Nov 27 14:00 runtime_log.err
[2025-11-27 14:00:44] -rw-r--r-- 1 boinc boinc     21214 Nov 27 14:00 stderr.txt
[2025-11-27 14:00:44] HITS file was successfully produced:
[2025-11-27 14:00:44] -rw------- 1 boinc boinc 920503332 Nov 27 13:59 shared/HITS.pool.root.1
[2025-11-27 14:00:44]  *** Contents of shared directory: ***
[2025-11-27 14:00:44] total 1305780
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc 410317000 Nov 27 06:57 ATLAS.root_0
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc    590107 Nov 27 06:57 input.tar.gz
[2025-11-27 14:00:44] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:57 start_atlas.sh
[2025-11-27 14:00:44] -rw------- 1 boinc boinc 920503332 Nov 27 13:59 HITS.pool.root.1
[2025-11-27 14:00:44] -rw------- 1 boinc boinc   5672960 Nov 27 14:00 result.tar.gz
14:00:46 (1315278): run_atlas exited; CPU time 223350.741903
14:00:46 (1315278): called boinc_finish(0)

</stderr_txt>
]]>

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